RNA id: XM_043239039.1


Basic Information

Item Value
RNA id XM_043239039.1
length 2174
RNA type mRNA
GC content 0.42
exon number 10
gene id il13ra2
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13646648 ~ 13653051 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cacacacacacacacacacacaccctgagtCACACAAGAGGGTGCTGTATCCAACAAAATCAGAGGACATTAAGCAAAGTTCATTCAGACAATCCTGAGGCGGCTTTATTGGCTCATAACACCAGGACCTTTCAATTGGAGAACGGTGACAatACCGATAATAACCCTTCAGAAGAAAATGTTGCTGCTGAATAAGGTTCATGCATGTCTCTCTGCATTCGCTTTGCTTTTGCTGACTCAGGAGCCTGTCTCTACATCAGAGTTTACGGACTGTGGAGATACGGACAATTTTCCCACAGTGGATCCACCTGCCAATATTGAGATAACAGACCCTGGCTTCCTGGGCTACATCAGTATCCACTGGACTCGACCGGCCAGCCTTCAGAACCTCACAGGCTGCTCAGTACGATACCAACTCAGATACTATGACACCTATGAGGAACGATGGAGGaGTGTTCGAACTGCCAAGCTCACTTACACTGCTCAGTTTGATCTTGAGAAACCAATCAAGGTGAGAATGCTCACTGTGCTGAAGTGTGCGTGCACCAATGGGACGGAGGTCCAAGGAGAGGAGACGGAGTGGGTCTACGCACCTGAACCTACAGGTGTGGCGGGATCACGGATAAGAGATTTTCACTGTGTTTACTATGGCAAGGAGTACATGGAATGCACCTGGGATTCAGGACCCGTCATACCTCCAAATTCACAGCACTACCTCTATTACTGGCACAGGGAAATGGATGAAACAAAGGAATGTCCAGAATACATCATATTATCTGAGGGTCGAAGGGGATGCCGGTTTCCTCAAAAATCACTTTTGGAGTTCTCAAAGTTTAATTTATGCGTAAATGGATCCTCTCCAGCAGGAAATTTGAAAACGGCTTACTTCTCTATTGAGGTCCAAAACCATGTAAAGCCAGAAGTGGTCTCTTCAGTGCATGTCTCAGAGATTGATGGAGAGCTGAAGTTAGATTGGTCCCCACCTAGTGGTCAGGTGCCAGAACACTGCTTGGAATATGAGGTGGAGAGCAGCACTACGATGAAAAATGGCAaggaaaaaaaggAAAATACGGTTATTCAGAATTTAGAAGACACATCTTATGGTGTCCCGAAAGAGACTGAAAGTCAGAAAACCTGCTTTCGAATCAGGTCGAAGGTGAACATGTACTGCGCTGATGAGGGATTTTGGAGTGACTGGAGCCAAGCAGAGTGTACAGAAGATAATGAAAAAACTCAGTATCTCAGTCTGGTGGGCCTGGTGGTCATTGGTATTGCTGGAGTCATCCTCCTCTGTCTTCTTATATGGATATTAAAGCAAACTTGCAtaaaaaagatgaacaaaaagGATGCCCTCTATACTTTATACAAGGAGAAGGTCAACGAGACTATGCCCAATATCCTCAGCCCTATTTTCAAGTGATGCTCCCCATGACCTGCTAAGCTGAATTTCAAAATTTCCAATTACTGCATTGCTATTACTAGGCTGCAGTAAAAGCGCAATACTCATGCAGAGAAACAAACGTGAGAAGTGAGACTTCAACAACCTTAGAGTGATCCTTACAGAACCAGTAGTCTTAGGGAACAGGTATGTGGGGACCTAAATGAACCACAGCACTGATACGAATGTATGAACCACTTTGGTTTCCAAGACACCATACTactattttatgtgtttatgcaCATATCATGTGTTACTTAAAGTTACTCAAAGATTTTTCTAATACAAGTTATCTTGCCAGTTTAgcaattatttttcaaatgccACTGATCTTGCCAATTTTGCCTCGATATTATCTTGATATTTTAGCCAgtgtttgttgttcttttttctaTTTCCACGATCTTGTTGGTTTTGCCAGTGGTTTTTCAAATGCCAGTGAGCTTGCCAATGATTTTTCAAATGCCAATCATCTTAATATTTTAGCCAATGAATTGTCAAATTCCAATGATCTTGCAGGTTTAACCAATGATTTTTCAAATGCCAGTGATCTTGTCAGTTTTATCTTGCTATCGTCTTTTTTGTTACCTTACTTTGATGTACGCATTTTTCagtatttgagtttattttactGCTGATTACATAATGAAGAAATCAGGAGGAACGAGTATTCATACACTTTGGGAAAATGTGCAAACGTTTATATacattatcaaataaaattttcttGAATTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU53457 lncRNA downstream 3323 13642526 ~ 13643325 (-) False LOC122345175
XR_006250978.1 lncRNA downstream 3334 13619026 ~ 13643314 (-) True LOC122345175
TU53448 lncRNA downstream 9325 13633670 ~ 13637323 (-) True G36279
TU53376 lncRNA downstream 82750 13562654 ~ 13563898 (-) True G36218
TU53385 lncRNA downstream 199529 13446621 ~ 13447119 (-) True G36227
TU53382 lncRNA upstream 55050 13708100 ~ 13711959 (-) True G36224
TU53473 lncRNA upstream 59630 13712680 ~ 13713420 (-) True G36297
TU53531 lncRNA upstream 165198 13818248 ~ 13819334 (-) True G36337
TU53602 lncRNA upstream 322302 13975352 ~ 13977070 (-) False G36385
TU53605 lncRNA upstream 322302 13975352 ~ 13977070 (-) True G36385
XM_043239037.1 mRNA downstream 28291 13612661 ~ 13618357 (-) True ftr84
XM_043240104.1 mRNA downstream 64358 13579320 ~ 13582290 (-) False h3f3c
XM_043239657.1 mRNA downstream 78452 13565166 ~ 13568196 (-) True kptn
XM_043239503.1 mRNA downstream 125080 13517643 ~ 13521568 (-) True ckma
XM_043238693.1 mRNA downstream 234812 13409262 ~ 13411836 (-) True rhogc
XM_043239033.1 mRNA upstream 1244 13654294 ~ 13699216 (-) True lrch2
XM_043239036.1 mRNA upstream 1244 13654294 ~ 13699215 (-) False lrch2
XM_043239035.1 mRNA upstream 1244 13654294 ~ 13699215 (-) False lrch2
XM_043239034.1 mRNA upstream 1244 13654294 ~ 13699215 (-) False lrch2
XM_043238578.1 mRNA upstream 67731 13720781 ~ 13732483 (-) True wdr44
TU53374 other downstream 64407 13579061 ~ 13582241 (-) True h3f3c
unassigned_transcript_955 other downstream 270948 13375629 ~ 13375700 (-) True trnap-agg_13
TU53125 other downstream 591791 13053844 ~ 13054857 (-) True G36047
TU52956 other downstream 1140690 12501914 ~ 12505958 (-) True G35936
TU52745 other downstream 1326963 12317803 ~ 12319685 (-) True G35825
XR_006250976.1 other upstream 6027 13659077 ~ 13699226 (-) False lrch2
XR_006250977.1 other upstream 6924 13659974 ~ 13699226 (-) False lrch2
TU53475 other upstream 64074 13717124 ~ 13718543 (-) True G36298
TU53529 other upstream 164692 13817742 ~ 13818942 (-) True G36336
unassigned_transcript_956 other upstream 185840 13838890 ~ 13838962 (-) True trnam-cau_26

Expression Profile