RNA id: XM_043239070.1


Basic Information

Item Value
RNA id XM_043239070.1
length 3076
RNA type mRNA
GC content 0.45
exon number 14
gene id mapkapk5
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 27445539 ~ 27457103 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAGACTCAGCCTACGTTGCTTCCCTTGCTCAAGTAAACTGATTAAAGAATCTTTAAACATCTGAACAGGCAAAAACACCGACGAAGAACATCACTACTTTGCAGTGCGATAAGAAGGTACTGTAAAATCGGTCTTTGTAAAAGTCTTTTTGAAATAATCTGTGGATCAAAATCAGTTCATCTGAAATTACGAAACGATTCCAACCTCACGCTGCTATAGTGAAGACACGACAAAAGACGACCGCTCGGATTGCGATAATGACATTTCTGACTGAAGATCTCATGAATTGCTTTTACATACGGAACGACTCGAGACTCGAAACGGACCCCGCATTATTTTCTGCAGCGGTCGGTCAGACCGAGCTCCTCTGCATTAGGTGGCGGAATGCGCCCGCGTCGCAGAATGTGGCGTATAATAAAGAAGAGCTATCTTCCCCAGCCTCGGATCAAAGGTAGCGCTAGCGCCTTAGCAAACAAACCCAGGACGGTATTTGGTCTCTATGGTGCTTTTCAAAACACCGTTAACCGCTTAACGCTGGATAGTCGAACGGAAATCGGTGGAATCGAGGCGCTCGTGCGCTCGCGTAACGCAATAAGCGCGAGATTTAGCATCTGAGGTAAACGCGAGCTTCAAAGCTAACTGCTGCTGCCGCTGATAACGGGCAGCCGACGGGGTATTACCGCTTTTGTTGTCCGTCGGTTTCGTCGCTCTCTTGTCAAGAACGGCGGATAGCGGCCGGGGGGACGGTAACGTGAACGGCGGCCGGTCTGAGCCGCTTTTCCTGCGAAATGCGCGCGTGAGATGTTAGCCGAGCACGTAACGTTATAGTCTCAGAAACTTGCGTCTCTATCGCTTCCCTACCGTCTTTCAGAAGTTTGACGGCGTATCGCGTTTAATGCCAGTTACGCATTCAACGAGGAAAGGCGCTGGTGTTCCAAAGTTCATCGGACAGCATGGAAATTGCACATAAGAAGGCATCTTAGCGCTCGAGACCTCGTCCAACGCCAACATTAGGTAAGATCGCACCTGTACGAGCCTGTTGAAGCCAAAGAGTGAAGATCGGCGAGTGCCACAGTCAACACCATGTCTGAGGACTCCAGCGTGGACAGATTCATAAAGGAGACATCGATCCTGGAAGAGTATAACATCAATTGGACACAGAAGCTGGGAGCTGGGATCAGTGGTCCTGTGAGGGTTTGTGTGAAGAAGTCAACACAAGAAAGATTTGCCCTGAAGATCTTGATTGACAGACCCAAAGCCCGCAATGAGGTTAGGCTTCACATGATGTGCGCCTCTCACCCCAACATTGTGAAAATAATGGAGGTGTACGCCAACAGTGTTCAGTTTCCCCATGAATCCAGTCCGAGGGCAAGGTTACTGATTGTCATGGAAATGATGGAAGGTGGCGAGTTGTTCCACAGAATCAGTCAGCACAAGCACTTTACAGAGAAGATGGCCAGCCAGGTCACTAAACAGaTAAGCCTTGCATTACAACACTGTCATTCATTAAATATTGCACATCGAGACCTGAAACCAGAGAACCTGCTCTTCAAGGACAATTCACtgGATGCTCCTGTAAAACTGTGTGATTTTGGCTTTGCCAAAATTGACCAAGGTGATTTAATGACCCCACAGTTCACTCCGTACTATGTAGCACCGCAGGTGCTGGAGGCACAGAGGCGCCACCAGAAAGAAAAGTCTGGAATTATACCTACCTCACCCACTCCTTACACATACAACAAGAGCTGTGACCTGTGGTCCTTAGGGGTGATCGTCTATGTAATGCTCTGCGGATATCCTCCGTTTTACTCCAAACACCACAGCCGTACCATCCCAAAAGATATGCGCAAAAAAATCATGACTGGTAGCTTTGACTTCCCAGAGGAGGAGTGGAGTCAAATATCTGAAATGGCCAAGGACATTGTCCGCAAGTTACTTAAAGTGAAGCCCGAAGAGAGACTAACCATAGAGGGAGTGTTGGCCCATCCCTGGCTCAACTGCACTGAAGCGCTAGACAATGTGCTTCCTTCTGCTCAAATGATGATGGACAAGGCAGTTGTGGCTGGAATTCAACAGGCTCATGCTGAACAGCTGGCCAACATGAGAATACAGGACCTGAATCTCAGTCTAAAGCCACTCAACTCGGTCAACAACCCCAttttgagaaagagaaagctACTTGGCACCAAACCTAACGATGAACTTTTCATCAACGATCCTGAGAATGAGGCGGAGGACACCAACGTGGCTCTGGAAAAATTACGAGACGTAGTCGCACAGTGCATCTTACCACAGGCTGGTGACAATGAGGATGAGAAGCTAAATGAAGTTATGCATGAAGCATGGCGATTCAATCGAGATTGTAAACTACTAAGAGATGGATTGCAAGGGTTAAGTTGGGATgGAAGATCCTTTTCAGACAAAGTAGACCGCTTGAAGCTGGCTGAAATCGTCAAACAGGCCATCGAAGAAAAGACAAATTTACAGGACTCCCAATAGCAAGTGCTGATTTTAATCCCTTTTGTACTGTTAATTATAATTGTCATTAGGCATATGAttgcaaaacatgtttttgtattaaattgcaGACCTGTTTCCACGGTCATGCTGTAGTCTGTTGTAAATCTCTAGCCGAAACCAAGTTGTTGTTGGTATGATTTGTTTTCACTACAGACTGCagtaaagaaatgtgttttaaagaaattgcactcttttcatttctgcttttcatAATGAAAAATAGGGGGAAACTATCTATATtagataacattttataattcacCAGCTCAGTTAAATTAACTGAATCAAAACATGTTGTCACTAATTGAAAAGAAGATAATGTAATACAATTGTAGTACACTATGAAATATTGCATTCCAATTTAAAGATGGAGAAGTTAATTTGAGAGCTCATTCGtcataaaatgtttatctttTGACTATTAGCTGGCACTGTTAGCAAACTTATGTTGTATTATCAGGGGATGCTTACAGTGGCACATACGACATCTGTCGGGTCAGTGAAGATCCGATGAATGCTgcaggaataaaaataaattttgtcaTTCTGAAGATTC

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04442 MAPKAPK5, PRAK; mitogen-activated protein kinase-activated protein kinase 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59046 lncRNA downstream 159345 27285182 ~ 27286194 (-) True G39893
TU59040 lncRNA downstream 178310 27265289 ~ 27267229 (-) True G39888
TU59023 lncRNA downstream 211377 27232658 ~ 27234162 (-) True G39872
TU59020 lncRNA downstream 219977 27224887 ~ 27225562 (-) True G39870
TU59004 lncRNA downstream 256317 27188850 ~ 27189222 (-) True G39857
TU59120 lncRNA upstream 81391 27538488 ~ 27538861 (-) True G39935
TU59121 lncRNA upstream 81843 27538940 ~ 27539327 (-) True G39936
TU59154 lncRNA upstream 193353 27650450 ~ 27650827 (-) True G39951
TU59171 lncRNA upstream 291363 27748460 ~ 27789829 (-) True G39964
TU59253 lncRNA upstream 438546 27895643 ~ 27895961 (-) True G40021
XM_043239076.1 mRNA downstream 69 27439081 ~ 27445470 (-) False kiss1rb
XM_043239075.1 mRNA downstream 69 27439081 ~ 27445470 (-) True kiss1rb
XM_043239073.1 mRNA downstream 1700 27439081 ~ 27443839 (-) False kiss1rb
XM_043239077.1 mRNA downstream 9089 27434577 ~ 27436450 (-) True zgc:153044
XM_043240205.1 mRNA downstream 13923 27421756 ~ 27431616 (-) True tmem116
XM_043239578.1 mRNA upstream 693 27457790 ~ 27467414 (-) True LOC122345447
XM_043240888.1 mRNA upstream 53776 27510873 ~ 27514550 (-) False eif2b1
XM_043240887.1 mRNA upstream 53776 27510873 ~ 27514246 (-) True eif2b1
XM_043240896.1 mRNA upstream 61668 27518765 ~ 27522039 (-) False dguok
XM_043240895.1 mRNA upstream 61668 27518765 ~ 27522039 (-) False dguok
TU59072 other downstream 46819 27382921 ~ 27398720 (-) True isca1
unassigned_transcript_1081 other downstream 1334137 26111332 ~ 26111402 (-) True trnag-gcc_64
unassigned_transcript_1080 other downstream 1335969 26109500 ~ 26109570 (-) True trnag-gcc_63
unassigned_transcript_1079 other downstream 1344130 26101339 ~ 26101409 (-) True trnag-gcc_62
unassigned_transcript_1078 other downstream 1353543 26091926 ~ 26091996 (-) True trnag-gcc_61
TU59237 other upstream 432026 27889123 ~ 27895454 (-) True LOC122344874
TU59335 other upstream 798731 28255828 ~ 28264704 (-) True G40080
TU59455 other upstream 2003488 29460585 ~ 29490204 (-) True G40182
XR_006251000.1 other upstream 2159902 29616999 ~ 29655061 (-) False eng
TU59650 other upstream 2469288 29926385 ~ 29926833 (-) False LOC122344966

Expression Profile