RNA id: XM_043239075.1


Basic Information

Item Value
RNA id XM_043239075.1
length 3017
RNA type mRNA
GC content 0.40
exon number 6
gene id kiss1rb
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 27439081 ~ 27445470 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tttttttttttttttttttactctgcaATTTCTCAGCCATTTCTTTTCTGTTGAAGCATTTAAGGACTTGTCATAACTAGAAAACTGTATGTTCGTTATGGAAATGTCCTTGACTTCGATTTTATTGGTGTCTATGATATTGTTCAACACTGGTAGTACAGTTCTTACAGACTCCAGCTGAAGTGTTTATGATGAAGCTTTGAAGACTCGGACTGAATAACAGTCTTATAGAAAGATGCACGGTTGTTTTGTGAAGTAGCCTTAtctttattaattgaataaCTGAAGAATTATTTGCTGGCATCAATTCTACAATACCTACTACAAATTAGAACTTGTATCACAAAATCAGTAAGCAGTAGATGATTTCAAGTTAATGGAACTTCCATACTTGTTTTTCTGCTGGCTGTGATGTGCTGTAGTCTGGAGTCAGAACTATTTGCCCTTTTGGTTTATGCAGCagtttaacaaacaaaaatttactttttagaCATGTGTTGTTGTTCCAAAAATAGTTCCACATAAAATTGAACCGGAACATTTGCATGTCTCAGAACAGCAGTGCTAGGTTTCAGtcctgaatgaatctgtttttaaacaaatcatttgaattcagttatccactttttttttcacccagaGCTGCTAAATCTGGTTTAGGCTGAGAAGGAGAACTAGAGCAAAATAGGCTACATTTTGAGGCATAATTAAATCATCCATAAAATCTGTTGGTCAATCAGGACAGCATGGAAATCAAACGGATTGATTTTGGATGCAGTGTGTTCATGAAGAAATCAAACGTTAAAGCTTTCTCTGGTATGCGATACGAACCATTGCTAATTAAGTACCGCGCAAAGCAAGCAACCATGTGGTTGCAAAAGATCTCCTTCCCACAGTCCCATAACCTGTACATGATCACTGCCAACGTCTGAGCAGGCCTGGCTTAGAGAGGTCTTCAGCAAAGAAGGACCAGGTGAATTCACAAAACAAGTACAAGTTAATAATCAGGTGTCTCGCTCGACTTTTTGCACAGAATGCTTCACAATGATTTATGATTGTCTGCAGATTTTCAGCAACTCTTTTTGCAGATTAAACCTATATTTGATGACAAGCCTTTATGAGTAAGTCACTGAATTATTCACGCCataaatttattcaaaaatacagattctaaaagctgaattatttactcaaaaataGTTGTATAATTTGTGCTATATAAACTTGAATGCTTATTGGATTTAAGGCACATCAGGtgatgtgtatttatgtaatgaGGGAGGGTGTGGCCGAAGGAGATCGACACACTATATCAAGGTGTGCATAATTACTAAGGAGATTTATCTCCACAGGAAAAGTGGGccaaaaaagagatttaacTGACTCTGAAAGTCAGTTGTGTGATCACAGAACCATCAAACGTTTTGTAGCAATTAGTCCACAGGGTGGCAAGAAACATGTCGAGAAGAAAAGAGACGCAAAGTAACTGCCAGAGATTTGAGAAGAATCAAACGTGAAGCTACCAGGAACCCATTATCTCCAGTGCTGCCATATTCCACAACTGCAACCTACCTGGAGTGCCAAGAAGTACAAGGTGTTCAGTTCCTAGAGACGTGGCCAAGgttaTTATCAGCATGGTGACACATGCAAGTATAATGGCAGAAAGTAACAGGACCAGTAAGGTTGCTCAACTGATCTCGTGCAACAATGAAGCGAATATTCATGATTGCAATCAATCCGATCCCATGGGATATCAAAGCCCAGTCCCACTGACGGATGCCTGGCTGGTGCCAGTGTTTTTCACCCTCATTATGTTTGTAGGTTTGGTGGGTAACTCATTGGTCATCTATGTAGTCGTCAAAAACCAGCAGATGAAAACCGTTACAAACCTTTACATAGTTAATCTCGCCACCACAGACATCCTTTTCCTGGTCTGTTGTGTTCCTTTCACTGCCACTTTGTACAGTCTTCCTAGCTGGATATTTGGGGACTTCATGTGTCGACTGGTCAATTACCTGCAACAGGTAACTGCACAGGCAACCTGCATCACTTTGTCAGCAATGAGTGTGGATCGTTTTTACGTGACCGTCTATCCACTACAGTCCCTCCGTCATCGAACACCACAGATGGCTCTCTCCGTATGCACCACCATTTGGATATGTTCATTGCTTCTTTCAGTGCCGATAGCGTTGTATCAGCACACGGAGTCTTGGTTTTGGTTCGGTCCGCAGACATACTGCACCGAGGCATTTCCCTCGCTCATTCACAAGAGGGCTTACATTCTTTACTCCTTCTTGGCCGTTTACCTGCTGCCTCTGGTCACCATCTGTTTGTGCTACACTTTCATGTTGAAACGCATGGGTCAAGCCACAGTGGAACCCGTTCAAGGCTGTAACCAGCTGCAGACGTCAGCAGAACGGGTTGAAGCGGTGAGGACCAGAGTATCCAGAATGGTGGTTGTGATGGTGCTGCTGTTTCTGGTCTGCTGGGGTCCAATCCAGATACTGATTCTCTTACAAGCATTCTGTTCTGAAGACGTGAGTCACAGCTATACGCTCTACAAACTAAAGATCTGGGCTCACTGCATGTCCTATTCCAATTCCTCCATAAACCCCGTGATCTACGCCTTCATGGGAGCCAACTTCAGAAAGGCCTTCAGAAGTGTGTTCCCTTTGATCTTCAAAAGGAACGCAAGAACAACCGAGCCTCTCCCCACCTATAACAGAGAGATGAACTTTCTTTCATCCTGACCTATAGAGGACATTTGGACTGGTTAAAAATCACTAACATTTGATGAAGATGCACTCGGACTGAAGCAATTCAACTGGgaaactgatttgttttttgttttgtttttttattacgaAGGACTGAATGTTTGAAACTTCAGCATACTTTTAAAAGAGTGCTCCTTTGTAGAAAAAACTAACGTTTTCGTTGTATGCTAATtgaaattaagttaaaatgtattattgtttctcttttattaaatgcagttagtTGAATAAGTTCATAAA

Function

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008188 neuropeptide receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59046 lncRNA downstream 152887 27285182 ~ 27286194 (-) True G39893
TU59040 lncRNA downstream 171852 27265289 ~ 27267229 (-) True G39888
TU59023 lncRNA downstream 204919 27232658 ~ 27234162 (-) True G39872
TU59020 lncRNA downstream 213519 27224887 ~ 27225562 (-) True G39870
TU59004 lncRNA downstream 249859 27188850 ~ 27189222 (-) True G39857
TU59120 lncRNA upstream 93018 27538488 ~ 27538861 (-) True G39935
TU59121 lncRNA upstream 93470 27538940 ~ 27539327 (-) True G39936
TU59154 lncRNA upstream 204980 27650450 ~ 27650827 (-) True G39951
TU59171 lncRNA upstream 302990 27748460 ~ 27789829 (-) True G39964
TU59253 lncRNA upstream 450173 27895643 ~ 27895961 (-) True G40021
XM_043239077.1 mRNA downstream 2631 27434577 ~ 27436450 (-) True zgc:153044
XM_043240205.1 mRNA downstream 7465 27421756 ~ 27431616 (-) True tmem116
XM_043240204.1 mRNA downstream 7466 27421756 ~ 27431615 (-) False tmem116
XM_043240203.1 mRNA downstream 18077 27415308 ~ 27421004 (-) True psat1
XM_043239916.1 mRNA downstream 24248 27399413 ~ 27414833 (-) True tut7
XM_043239071.1 mRNA upstream 69 27445539 ~ 27457103 (-) False mapkapk5
XM_043239070.1 mRNA upstream 69 27445539 ~ 27457097 (-) True mapkapk5
XM_043239072.1 mRNA upstream 69 27445539 ~ 27453385 (-) False mapkapk5
XM_043239578.1 mRNA upstream 12320 27457790 ~ 27467414 (-) True LOC122345447
XM_043240888.1 mRNA upstream 65403 27510873 ~ 27514550 (-) False eif2b1
TU59072 other downstream 40361 27382921 ~ 27398720 (-) True isca1
unassigned_transcript_1081 other downstream 1327679 26111332 ~ 26111402 (-) True trnag-gcc_64
unassigned_transcript_1080 other downstream 1329511 26109500 ~ 26109570 (-) True trnag-gcc_63
unassigned_transcript_1079 other downstream 1337672 26101339 ~ 26101409 (-) True trnag-gcc_62
unassigned_transcript_1078 other downstream 1347085 26091926 ~ 26091996 (-) True trnag-gcc_61
TU59237 other upstream 443653 27889123 ~ 27895454 (-) True LOC122344874
TU59335 other upstream 810358 28255828 ~ 28264704 (-) True G40080
TU59455 other upstream 2015115 29460585 ~ 29490204 (-) True G40182
XR_006251000.1 other upstream 2171529 29616999 ~ 29655061 (-) False eng
TU59650 other upstream 2480915 29926385 ~ 29926833 (-) False LOC122344966

Expression Profile