RNA id: XM_043239109.1


Basic Information

Item Value
RNA id XM_043239109.1
length 5493
RNA type mRNA
GC content 0.43
exon number 26
gene id parp8
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15174388 ~ 15199837 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGAAATGCAAAACCTGGAGTGGAGCTTCAGACTGATCACAACAGGCTGCTTCATTTACACCGACATACAGTCTGAACTCTGAAGCGCAAGTTccttgattttattcgcttttCGTTTAGCTTGCACGTCGCCGTTGTTCTAAATATCAGCACACCCGTCCTTGTACAAAATCGCGTGACGCcgcttaaataaaaacctatGTTTCTGAGTAAACGAATCGCTTTTTATTCCGTAACGGTCAGAGGCCAGCGATACTGAGCGGGTCCAGCAGCAGAGAGGGCGCGTGGGGAGAAAAACACGTCCATGACATCATCCGCCTTGTTGTGATTCCCGTTTCCACCGGGTTCATCTCGTGGATGCTATCACAGGATTCCCACACTGATTTCCCCCGTGTGCAACTTCAGCTCCTCCGTCACGGTCTGAAGCTCACGCCCGCCTTGGCTTTACTTGcggtatcttttttttttctcgctccGCGGTTTAGCTTTCGATTTCGCCATTGTTAGGTTCAGCAGAAGAGTTATGAGGACGACTGAGAGATGCTTCCGGTGTAAAAGTGATATCTTCATGAAAGCTGTCGCGAGGAAGAGCTCTCCGCTGTGCTCATGCGATCGAGGCTATTGTTAGAGGAGATGAAACGGTGTCGGTTGGCGTGACACACCTGGGATTGTTACAGCAGACCTCCAAGCACGTATTTCTACTGTTCCCCACATCCATCGTGCCTGCAAGCGGAAAAGATTCGTTCGTTTCGCCGAATATTAGTTAGAGAAGCCATTCTAGTGTGTGTTATTTCATGGGGATGTGTTCAAGGCAAGAGAGGATTCAAAAAGACGTCGACATCGTAATTCAAAGGTGTAAGGCAGAGAAAGACTGCCTGTTTTCTGACTTTCGATTCTCAGACTCCACGTTCACGTTCACCTACTCAAAAGGACCTAAAAGggtgtcCTACTCTGTTCATGTCTCTGATGATTATCCAGATAACACATACGTGTCTAACTCTGAAAACAATGATGAAGTGTTAGTCACCAGGGATCCAATACCAGTGATTTTCCACAGAATTGCAACAGAAATACGCATAAATAACGATGCCACCAGCTGTCTGTCTATTAGATCAAAACTTCAAACCGACAAAAATGCGTGCCATTATGCTATAGAGGAGGATTCAGAGGGGGACAATGATTCAGAGGAGTTCTACTATGTTGGACAGGTAAATTATGATGGAGAGCTTCACAAACACCCCCAGCTGGAGGCTGATTTGGCAGCCGTGAGGGACTTATATGGCCATCATGCAGTATCTCTCAGGGAATATGGTGCCATTGATGATGTGGACATCGACCTACACATTGATGTCACTTTCCTAGATGAGGAGATAGCACTTGCCTGGGATGTGATCCGGAGTGAACCTGTTATTGTGCGGCTTCACTGCTCCCTCACGCAGTATCTCAATGGACCAGTTCCCACTGTTGATGTGTTCCAAGTGTCTACAAAAGACAGATTTGGACTTGGACATCAGTTGAAAAAGGTAATGCAAACCTTTGTCACACAGCAGTGGAAGTGTCAGAGCAAAGATAAACTCATCAGCCCACACAGCAAAAAGCAAAACGAGAAGAAAGTGAAGTCTCCCCTGCACATTTTTTCAACTCTACGCAGATCCCCCAGCTACCCTCCTCCTGGCTGTGTGAAGAGCAAAAAGAAGCTCAAACCTGAGCAGGATGGCATGTCGAAATCCCACCGTCTGTTGCGGCGAACATGCTCCAGCACGGTGAAGCCAGAAATGGACGGCTGCGTCGGCAAGTCGCACAAGCTCCTCGGCCATTCCCTCTCCAGTGACCCTCGGATGGAGCAACATCAGCCCCTCAAGCAGCCCCACCGGCTGCTGCCGAGGCCCTGCTCAACCACAGTTAAACCGGAGGACTGCCCGCCGCTGCGGCCTCATAAACTGTCGCCGCGGTCGAGCGCGGCAGAGCCTCGCTGTGAACACGCTGCTGGCAGTAGCGATGGCGGTGCTTTAAAGCCCCACCGGCTCCTGGGCCGCTCCTGCTCGGGCAGCGTGCGGACTGAAGAGCTGGATGGCCTGAAGCACCACCATCGTCTGCTCAGCAGGTCCTACTCCAGCAGCACCAAGATGGGCAAAAACGACATCTTTAAAGAGCCTGTCACAGAGAGCAGACGCCTCTCCCTTACCTCAGGGCTAATTGGCATCCTGGCCCCATCACTCTCTTCCACACCTCAGCCAAACATTGGCGCCAAATCCATTCCAATCAGAGACAGAGGCTTCCTtgttcagACTATGGAGTATGCAGAGCAGCGTATCCCTGTCCTGAACGAGTTCTGTGTGGTCTGCGATGAACCTCACGTGTTCCAAAATGGACCAATGCTCAGACCcacagtgtgtgagagagagttatGTGTATTCGCCTTCCAGACGTTAGGGGTCATGAATGAGGCTGCTGACGAGATTGCCACTGGTGCTCAgGTAGTAGACCTACTGGTCTCTATGTGTCGATCTGCACTAGAGTCTCCGAGGAAAGTTGTCATTTTTGAGCCATATCCCTCTGTGGTGGATCCCAATGACTCACAAGCACTTGCCTTCAACCCCAGGAAAAAGGACTATGACCGAGTGATGAGAGCACTTGACAGTATCGCGTCTATCAGAGAAATGACCCAGGCTCCATATCTGgagataaagaaacaaatggACAAGCATGATCCCCTGGCTCACCCACTGCTGCAGTGGGTGATTTCCAGTAACAGATCACACATAGTGAAGCTTCCTGTTACTAGACAACTGAAGTTCATGCACACACCCCATCAGTTCCTCCTGCTCAGCAGTCCGCCAGCCAAAGAATCCAACTTCAGAGCTGCCAAAGGCCTCTTTGGGAGTACCTTTGCTTTCCATGGATCACACATAGAAAACTGGCACTCCATTTTGAGGAATGGTTTGGTTGTGGCATCAAACACAAGGCTTCAGCTCCATGGCGCTATCTATGGGAGTGGAATCTATCTCAGTCCATTATCAAGCATATCCTTTGGCTACTCAGGgatgaataaaaaacagcagaaaGTTGCTTCAAAAGATGAAACTGCTGCCAACAAGTCCAATATTCATTTgcagTCACAGAAGAAAGGGCAGAACCCGCAGTTTCTGCAGAGCCGCAATCTGAAATGCATAGCCTTATGTGAAGTTATTACATCTCCAGACCTGCACAAGCATGGGGACATCTGGGTGGTTCCAAATACAGATCATGTCTGCACACgctttttctttgtttatgaagacGGACAGGTAGGTGACACAAGTATAAACACACAGGACCCTGGCATTCACAGGGAGATCCTGCGAGTCATCGGCAATCAAACGGCTACTGGATGAAAGAGTTTGAACACAATACCGCTGCCTTGACCTCTTTCCCAAAGCTGGACATTTGAGCGTAGGAGGCCAATACCACATGTATTTTTGGTaaccacaaatacacacacacacaaaaaacaacaacaagtaTATTCGCAATCTTCAGAATACACTATTTCTACTGTTCCCCTGGgatacatgcatatttacacTGGCTATTCAAACTATTACCATTTTGCTAAGTTTATAAATACAAGGTACATTTTGAAAGAGCATGGTATGTCTCTCAGCTCAGCTGATAGACtacttattttttgtaaagaatacaaaaaatgaAACTCTTTGAAGAATACAGTATTTTGAGACTTTCCTGGAGAAAATACAATATTCCTGTGAGGATATGCGCCATCTGACCTTGTTTACTAAGAGTTGTACTTGTTAAAGTACATTAATTTGTGTATACAAAAGGTGTCTACTGtatatgcactttattttttttaatgtatgataGCTGTTTCAAACTTCCATATAATCTTAAATGCCTTTTGAGAGACGgacatatttattgtttgacagTGCTGAACACAAGCAAGCAACTCCTGATGTTGACTGCATTTACAGCTGATGGAGAGCTTCGACAAGTggagttttaaaaacaaaatccctGTGCTACAGCTAATATTTTCTGCTACTTAAAAAAGTAGCCGTCGGTTTACAATTTCTAAAGGCCTCAGTTTAGAATTTGCCCAGATGTACCGAACCTGCCACTTCATTAACACCGTCATTTTAAACGGACAGTATCGCTGTTACGTTTTCATTTATGAGTGACTATACcaactatgaaaaaaaaaaacacgatttaaaaatacaaaaaaaccctaaaagaCTTTATATATTCGGCAGCGACAACTAAACATAAGATGCATGCTGCTTTCCTCACGTTTTCAGATATTTTGATAATGGACAAAAATCGGCACCCAATTGTAAAATGTCTTTGAATACTTCAGTATAAATCTTTTTTGTAAGGTGATTTTAAGGCAGAATAAGTGTTTGCTGCTTGTTGTTTATACATTGTAATGTATtaacagaaagttcaaatgtGTGAGTTTTCTGTTCAATTTTTGGAATTCTTTATAGTGATGTTTAGACACCTGTGTGGTTGTTAACTTTACTTTCGAAACATTAAATTGTTCGATCATTGAAATCactaaatcttttttgtttgagaATGATCACCCAATATAGGTATTAGGAATATGTGCATAAAGGTAACACGtttggttaaaattaaattgtataaaaaaaatactatgtcTAAAAGCAACTTTTAAGTCAAGATGTAGCACCGCaacgttttttttctcacttatGGGCCGAATTAtgggttttattaaaatatgggCACATTAAATATGTGGTATTGATTATTTTGTGTGCAgaaaagtattttgtatttttccatgGGGCTCTGAAATACTGGTAAATTCACATAATGTTCACCTGCAATATATTCCATTTGACCATTGACATTATAGTTTGAATTGAATGGCAACAgcttattacattaaatttaaagtttaCATAATCATTATGCATtgtcaattctgtcattactaAAAAATGTGGTAATCAGATTAATTATATTGATTATTCTTTCAAGTCTACAATCagttaataaattgtttaaatatctttcaaagatatttttcaaatatcttttAAGATGGGGTAGTTCCTACATGCATGTACACTCATAACTGTTGCAACTAACAgcagcttatttttatttgtttatatttttccattGTGATGGACAATGTTCATATGTGATAGGTCTATTTGTatagttttgtacattttccgcacaatttggtaaaaaaaaaaaggatcatgCTACTTAGCATTTGGTGCCTTATCGATAAGGATTTAATGGCAAACATGACAGTACTGTCATATatgaaaatactgtatatagtgTAAATAATGCCACAGCAACATGGAGGCCAAATATTTTCTGtagtacatttttactttttccttaTTTTGCGAACGGATCAAGGTTTTGGCTTTTTACAAGTTATGGAAATAGTAGCTTATGTATCTGTTTATGTTCattaaattcagatttgccaataattca

Function

GO:

id name namespace
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG:

id description
K15258 PARP6_8; poly [ADP-ribose] polymerase 6/8

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54241 lncRNA downstream 5030 15169047 ~ 15169358 (-) True G36811
TU54112 lncRNA downstream 268767 14905385 ~ 14905621 (-) True G36714
TU54099 lncRNA downstream 293323 14880865 ~ 14881065 (-) True G36708
TU54076 lncRNA downstream 475435 14698736 ~ 14698953 (-) True G36696
TU54002 lncRNA downstream 521995 14652095 ~ 14652393 (-) True G36631
TU54472 lncRNA upstream 361885 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 362311 15562148 ~ 15562363 (-) True G36968
TU54475 lncRNA upstream 364261 15564098 ~ 15565262 (-) True G36969
TU54502 lncRNA upstream 503915 15703752 ~ 15709388 (-) False cenpv
TU54544 lncRNA upstream 513838 15713675 ~ 15713975 (-) True G36986
XM_043238533.1 mRNA downstream 46216 15121996 ~ 15128172 (-) True isl1a
XM_043238532.1 mRNA downstream 46216 15122000 ~ 15128172 (-) False isl1a
XM_043240362.1 mRNA downstream 150932 15016899 ~ 15023456 (-) False fsta
XM_043240363.1 mRNA downstream 150932 15016899 ~ 15023456 (-) True fsta
XM_043239467.1 mRNA downstream 254449 14918926 ~ 14919939 (-) True hspb3
XM_043239713.1 mRNA upstream 6114 15205951 ~ 15264945 (-) True pdzd2
XM_043239714.1 mRNA upstream 6114 15205951 ~ 15245898 (-) False pdzd2
XM_043239676.1 mRNA upstream 68839 15268676 ~ 15279272 (-) True golph3a
XM_043239960.1 mRNA upstream 80377 15280214 ~ 15292882 (-) True mtmr12
XM_043238862.1 mRNA upstream 94019 15293856 ~ 15308440 (-) True zfr
TU53907 other downstream 872007 14292063 ~ 14302381 (-) True LOC122345141
XR_006250968.1 other downstream 1117683 14045477 ~ 14056705 (-) False rnf214
XR_006250967.1 other downstream 1117683 14045477 ~ 14056705 (-) True rnf214
XR_006251003.1 other downstream 1164852 14001934 ~ 14009536 (-) False tmprss13b
XR_006251010.1 other upstream 6114 15205951 ~ 15264945 (-) False pdzd2
XR_006250970.1 other upstream 96181 15296018 ~ 15308440 (-) False zfr
XR_006251075.1 other upstream 150179 15350016 ~ 15367413 (-) False npr3
TU54482 other upstream 373274 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 373421 15573258 ~ 15574817 (-) False alkbh2

Expression Profile