RNA id: XM_043239160.1


Basic Information

Item Value
RNA id XM_043239160.1
length 2917
RNA type mRNA
GC content 0.48
exon number 9
gene id slc39a14
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 3849493 ~ 3873889 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCGTTCCACGCTGCTGTCTCGTGAATGGGTcaagaccaaaaaaaacaaacccatccGGTCCCTCTGTTTTAAACGGGTCGCCACATACCCCTCCGTTCATTCTGGACAGTCAGGCAACGGACCCGCCACGCGCCCGACGGATCAAGAACTCTCAAATTCGCTCAACGTGTTGCTGGCAGAGTCATGACCCTGAGACCAGCCAATGGCTGCAGACAGCTGACCTTGACCTTTGGCCTGACCCTCGCTCTGGGCCTGCTGCAGTGGCCGATAGGAGATGTCCGCGGTCAGGATGGTGGTCCGTCTCCTGCGCTTGTCCTTCAGGAGCTGCTGGCACGCTACGGTGACAACACCAGTATCTCCGTCCCTCAGCTCCGAGCGCTCCTCACGCGCTTAAACGGAGACCATGACGCACAAACACAGCCTGCCAAAGCCAATGCATCTCAGTGCTTGGCTGCAGACACTCTGGCAGCGTACGGGATGAACGAAAAGTCCCGTATAGATGAACGAGGCCTGCAGGAAATCTGCCCTACCATGATACAGCAGCTGGACTCACAAGCTTGCAAGAGCCAACAGGACCAAGAGCCCGAGACCAGCCCCAGACCCACTGATGCTGAGGTGTGGGGCTATGGGTTCCTGTGTGTGACCGTGATCTCTCTGTGTTCACTGGTCGGGGCGAGCGTGGTTCCCTTCATGAGGAAAACCTTTTACAAGCGGTTGCTGCTGTACTTCATAGCCCTGGCCATTGGTACTCTGTACTCCAACGCACTCTTTCAACTAATCCCAGAGGCCTTCGGATTCGACCCCATGGAGGATTATTACGTGCCCAAGTCTGCTGTTGTGTTTGGAGGCTTTTACCTGTTCTTCTTTACAGAGAAAATCCTCAAGATGATCTTAAAGCCAAAGGAAAGGGGAGGGCATGGCCACAGTCACTTTCCCGCGGAGCGCTACGCCAGCTCTAATGGAGATCTGGAGGACGGCGTGATGGAGAAACTGCAGAATGGAGAGGCCGGAGGAGCGTCTTTACCCAGGCCGGAAGGAGACGCCAGAGGCCTTGCTGAAGACGACAAGATGCTCAACACTGGCCAGACGGTACAGGACTCTCAGAGCTCGGGCGGATGCTATTGGCTGAAGGGCAGGGCGTACTCTGACATCGGCACTCTGGCCTGGATGATCACGCTGAGCGACGGCCTGCACAACTTCATCGACGGTTTGGCCATCGGAGCCTCCTTCACCGCTTCTGTGTTTCAGGGCATCAGCACGTCGGTGGCCATTCTGTGCGAGGAGTTTCCACACGAGTTAGGGGATTTTGTAATCCTGCTCAACGCTGGCATGAGCATCCAGCAGGCGCTCTTCTTTAACTTCCTGTCAGCGTGCTGCTGTTATCTGGGCATGGGCTTCGGCATCCTGGCTGGGAACAACTTCTCTCCTAACTGGATCTTTGCTCTGGCCGGGGGCATGTTCCTCTACATTGCGCTGGCTGATATGTTTCCGGAGATGAATGAGGTGAGCCGTGAGGAAGAGGAGGCCGGAGGAAGTGGCTCTCTGGTAACGTTCGCCATCCAGAACGCAGGGCTGCTCACGGGCTTCGCCATCATGCTTATACTGACCATCTACTCTGGACAGATACAGCTTGGATAGCAGAGAACCTAACTCCGACGCTAAAAGACTATCTCAGCAACCCGGACCGAAACCCTGAGATGGACTTCAACGTGAGCCGGCTGTGCTGTGCTCGTTTTAAACCATTTGCCCAGCTGGACTAGGTCACGAcagaaatgactaaatgtttCGGCCGTAGTTTGGGCTCCAAATAAACCCCGGACCGTCGAGATAAGGCTAGAATTGACCGACCTGCGAACCTTTGCTTTAGATTCACCCGAAACCCGGGACTTACCGATGGATGAGCTGCCCTCCGGTTCTTCTGCCTCAAAGCTTTGGGACATTCCCATCATTTAATTCTCCCTCAAAGACGGGCCCGACGGACGGGACGCTTCCTACGCTTCACACCAAATGGTTTTATTCAAAAGAAAGATTCTCAATAATGCTAGTTGCCTAGGGACGAGATGTAGACGTAGACTAGTTAGATAGCCCTCATTATTCTACTAAAACCAATCTCACTTTAATCAAAGGTTGCACTGTTGCGTAAATAGATTGTAGTTTAGGCACAAAGCGGAGTCCGTTCAccaatatatctatttttttctcctcaaatGCATTCCTTCTTTTTCTCTTGATGGTTTTCGTTTAACgtcttcaacaaaaaaaaagcagagaccAGGCTTCTTCCAGAAAATGTTCCTTTAGCTTTTATCTTTCTGTTTATATGACCAGAAAAAGCGGCGTATGCTTTCGACAccctactttttcttttctttttctttattttttttaaacaccctACCGTAACATTGCATATTAAGTGATGCAGAAAATGATCACACCAGTTATAAAACTTATAAAACACTTATCACTAAACTCTAAATGCAGTACTCTtcgaaatgaaagaaataattgGGAAACGCAGCAAAGACGTGCGGTGCTGTAGTGTTTCTGCAATATGACCATTCCTTATAACCTTTGCTTTATTGCACTACATCCAACATTATTAGAGCTCTTTGCCAATCAAGCATCTAGACTGACAAATCGTTTTCGATATCGGTGGATTTTAAGCTGAATTTTGTCATTTCTGCGCCAACGGTTCAGTCAAACGCTGTTCGTTTTCCTTTTCCCGCTGTAGTGTTtcaatatttgaaatgttttttttttttaattcacagtgtttaaatttttgtgaaaaaacatCAACCAACAAATGGCTTGCCTTATAtctaacattatattaaattaagatGATATTATAAGCAAATTAAGAtgataaaaagttatatatatatatatatatatatatatatatatata

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU48785 lncRNA downstream 100477 3744675 ~ 3749016 (-) True coq5
TU48784 lncRNA downstream 100477 3747616 ~ 3749016 (-) False coq5
TU48777 lncRNA downstream 196605 3648466 ~ 3652888 (-) True G33124
TU48765 lncRNA downstream 230439 3617937 ~ 3619054 (-) True G33114
TU48594 lncRNA downstream 459114 3388284 ~ 3390379 (-) True G33008
TU48808 lncRNA upstream 24703 3898591 ~ 3904546 (-) True G33140
XR_006250999.1 lncRNA upstream 93968 3967856 ~ 3968964 (-) True LOC122345413
XR_006250997.1 lncRNA upstream 176894 4050782 ~ 4051472 (-) False LOC122345411
TU48810 lncRNA upstream 177027 4050915 ~ 4051469 (-) True LOC122345411
TU49028 lncRNA upstream 986111 4859999 ~ 4902402 (-) True G33300
XM_043238280.1 mRNA downstream 2323 3822118 ~ 3847170 (-) True susd2
XM_043240848.1 mRNA downstream 39797 3753979 ~ 3809696 (-) False kremen1
XM_043240847.1 mRNA downstream 39799 3753979 ~ 3809694 (-) True kremen1
XM_043239950.1 mRNA downstream 96729 3747873 ~ 3752764 (-) False coq5
XM_043240173.1 mRNA downstream 186583 3659704 ~ 3662910 (-) True xbp1
XM_043240840.1 mRNA upstream 4762 3878650 ~ 3898578 (-) True piwil2
XM_043239522.1 mRNA upstream 263643 4137531 ~ 4141903 (-) True LOC122345410
XM_043240860.1 mRNA upstream 270968 4144856 ~ 4192823 (-) False LOC122346168
XM_043239521.1 mRNA upstream 413911 4287799 ~ 4319735 (-) True LOC122345409
XM_043240871.1 mRNA upstream 476339 4350227 ~ 4370478 (-) True LOC122346182
TU48454 other downstream 836674 2935743 ~ 3012819 (-) False LOC122344624
TU48464 other downstream 889316 2951462 ~ 2960177 (-) True G32908
XR_006250982.1 other downstream 1243578 2587553 ~ 2605915 (-) False add2
TU48396 other downstream 1264067 2580548 ~ 2585426 (-) False snrnp27
TU48378 other downstream 1295347 2496504 ~ 2554146 (-) True G32857
TU48805 other upstream 11537 3885425 ~ 3894475 (-) False piwil2
TU48804 other upstream 11662 3885550 ~ 3894475 (-) False piwil2
TU48820 other upstream 271039 4144927 ~ 4193081 (-) True LOC122346168
TU48822 other upstream 271039 4144927 ~ 4193081 (-) False LOC122346168
TU48823 other upstream 271039 4144927 ~ 4193081 (-) False LOC122346168

Expression Profile