Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043239187.1 |
| length | 1149 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | LOC122345240 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 1878085 ~ 1880008 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07887 | RAB5A; Ras-related protein Rab-5A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47971 | lncRNA | upstream | 92443 | 1785401 ~ 1785642 (+) | True | G32552 |
| TU47959 | lncRNA | upstream | 111195 | 1766596 ~ 1766890 (+) | True | G32542 |
| XR_006251105.1 | lncRNA | upstream | 112678 | 1762921 ~ 1765407 (+) | True | LOC122346170 |
| TU47957 | lncRNA | upstream | 115803 | 1762005 ~ 1762282 (+) | True | G32540 |
| TU47956 | lncRNA | upstream | 116114 | 1761564 ~ 1761971 (+) | True | G32539 |
| TU48082 | lncRNA | downstream | 21450 | 1901458 ~ 1905499 (+) | True | LOC122346050 |
| TU48091 | lncRNA | downstream | 78110 | 1958118 ~ 1958584 (+) | True | G32643 |
| TU48092 | lncRNA | downstream | 86171 | 1966179 ~ 1966378 (+) | True | G32644 |
| TU48094 | lncRNA | downstream | 111541 | 1991549 ~ 1993168 (+) | True | G32646 |
| TU48090 | lncRNA | downstream | 116012 | 1996020 ~ 1997056 (+) | True | G32642 |
| XM_043240700.1 | mRNA | upstream | 2037 | 1865595 ~ 1876048 (+) | True | LOC122346048 |
| XM_043240698.1 | mRNA | upstream | 13379 | 1851607 ~ 1864706 (+) | True | LOC122346045 |
| XM_043240563.1 | mRNA | upstream | 57528 | 1806950 ~ 1820557 (+) | True | sec14l8 |
| XM_043240564.1 | mRNA | upstream | 57528 | 1807397 ~ 1820557 (+) | False | sec14l8 |
| XM_043240534.1 | mRNA | upstream | 72044 | 1796834 ~ 1806041 (+) | True | tctn2 |
| XM_043239188.1 | mRNA | downstream | 2007 | 1882015 ~ 1892104 (+) | True | LOC122345241 |
| XM_043240712.1 | mRNA | downstream | 19587 | 1899595 ~ 1900425 (+) | False | LOC122346055 |
| XM_043240710.1 | mRNA | downstream | 19593 | 1899601 ~ 1900425 (+) | True | LOC122346055 |
| XM_043240703.1 | mRNA | downstream | 20619 | 1900627 ~ 1905282 (+) | False | LOC122346050 |
| XM_043240708.1 | mRNA | downstream | 26919 | 1906927 ~ 1917452 (+) | True | LOC122346053 |
| TU48056 | other | upstream | 35072 | 1835148 ~ 1843013 (+) | True | G32620 |
| TU48046 | other | upstream | 51971 | 1822654 ~ 1826114 (+) | True | G32611 |
| TU47965 | other | upstream | 84842 | 1791860 ~ 1793243 (+) | False | ccl19a.2 |
| TU47619 | other | upstream | 762680 | 1112496 ~ 1115405 (+) | False | selenoe |
| TU47584 | other | upstream | 820932 | 1055193 ~ 1057153 (+) | True | G32277 |
| TU48080 | other | downstream | 21450 | 1901458 ~ 1905288 (+) | False | LOC122346050 |
| TU48087 | other | downstream | 130403 | 2010411 ~ 2018459 (+) | False | LOC122345711 |
| TU48185 | other | downstream | 385137 | 2265145 ~ 2268194 (+) | True | G32706 |
| TU48610 | other | downstream | 1725178 | 3605186 ~ 4144396 (+) | False | G33015 |
| TU48613 | other | downstream | 1725178 | 3605186 ~ 4144396 (+) | True | G33015 |
