Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043239200.1 |
| length | 1381 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | LOC122345250 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 9566515 ~ 9569294 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0006810 | transport | biological_process |
| GO:0005765 | lysosomal membrane | cellular_component |
| GO:0031902 | late endosome membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K16295 | CYB561A3, CYBASC3; lysosomal membrane ascorbate-dependent ferrireductase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51125 | lncRNA | downstream | 318474 | 9246920 ~ 9248041 (-) | True | G34704 |
| TU50983 | lncRNA | downstream | 505701 | 9013306 ~ 9060814 (-) | True | G34594 |
| TU50996 | lncRNA | downstream | 575202 | 8991101 ~ 8991313 (-) | True | G34607 |
| TU50995 | lncRNA | downstream | 575492 | 8988611 ~ 8991023 (-) | True | G34606 |
| TU50967 | lncRNA | downstream | 632376 | 8933911 ~ 8934139 (-) | True | G34583 |
| TU51339 | lncRNA | upstream | 194779 | 9764073 ~ 9764532 (-) | True | G34869 |
| TU51341 | lncRNA | upstream | 196974 | 9766268 ~ 9766607 (-) | True | G34871 |
| TU51347 | lncRNA | upstream | 208339 | 9777633 ~ 9778238 (-) | True | G34877 |
| TU51619 | lncRNA | upstream | 712115 | 10281409 ~ 10296141 (-) | True | G35035 |
| TU51637 | lncRNA | upstream | 768453 | 10337747 ~ 10341167 (-) | True | G35047 |
| XM_043239204.1 | mRNA | downstream | 583 | 9565479 ~ 9565932 (-) | True | zgc:153409 |
| XM_043239202.1 | mRNA | downstream | 3219 | 9561925 ~ 9563296 (-) | True | LOC122345251 |
| XM_043239198.1 | mRNA | downstream | 8144 | 9535533 ~ 9558371 (-) | False | loxl2b |
| XM_043239197.1 | mRNA | downstream | 8144 | 9535533 ~ 9558371 (-) | True | loxl2b |
| XM_043240462.1 | mRNA | downstream | 48002 | 9508637 ~ 9518513 (-) | True | sfrp1a |
| XM_043239838.1 | mRNA | upstream | 1908 | 9571202 ~ 9575807 (-) | True | hdr |
| XM_043239839.1 | mRNA | upstream | 1908 | 9571202 ~ 9575805 (-) | False | hdr |
| XM_043239837.1 | mRNA | upstream | 10194 | 9579488 ~ 9681801 (-) | True | unc5db |
| XM_043240507.1 | mRNA | upstream | 181358 | 9750652 ~ 9752957 (-) | True | tm2d2 |
| XM_043240165.1 | mRNA | upstream | 184740 | 9754034 ~ 9757833 (-) | False | tbx3b |
| TU51236 | other | downstream | 163892 | 9337828 ~ 9402623 (-) | True | G34789 |
| TU51091 | other | downstream | 346008 | 9215508 ~ 9220507 (-) | False | vamp5 |
| TU50964 | other | downstream | 636462 | 8929470 ~ 8930053 (-) | True | G34580 |
| TU50888 | other | downstream | 888797 | 8674549 ~ 8677718 (-) | False | LOC122345093 |
| TU50638 | other | downstream | 1134940 | 8429700 ~ 8431575 (-) | True | timm8b |
| XR_006251099.1 | other | upstream | 755821 | 10325115 ~ 10335342 (-) | False | si:dkey-96l17.6 |
| TU51745 | other | upstream | 891914 | 10461208 ~ 10461709 (-) | True | G35122 |
| TU52098 | other | upstream | 1299070 | 10868364 ~ 10874064 (-) | True | G35371 |
| TU52116 | other | upstream | 1354633 | 10923927 ~ 10926163 (-) | True | G35384 |
| TU52323 | other | upstream | 1850661 | 11419955 ~ 11467122 (-) | False | hmgn7 |
