RNA id: XM_043239297.1



Basic Information


Item Value
RNA id XM_043239297.1
length 1103
RNA type mRNA
GC content 0.45
exon number 2
gene id tmem203
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24615358 ~ 24616916 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGCTCATCTCAGCTAGCTTGTCTTCTTTACAGATGCTTATTCACCGCTGTCAACCCGCTCGTTCTTCACCgacctttaaaaaatgtagtttacgGTTAAATATCTGTCTTTAACATTACAGCGAACGATATCTGTGAGAGTCAGATGCATCAGAAGTCATAAGGTGGACCTGCTCCATCTCCAAAACAGCATGATGCTGCCAAAATAGTGAAATGCTCATCAGTGGAGGATTTTTCATAGACATTAACGCCCATTAAATGCTTCTTTTCACTCGCGGTTCCTGTGCTTTCACCTAGTAAGTCTCCTAGTAAGCAACACTCAGTAGTGTCCCATTAATAATGCTGTTCTCTCTGCGAGAGCTGGTGCAATGGCTGGGCTTCGCAACATTCGAGCTGTTCCTCCACTTGGGCGCGCTGCTGGTCTTCAGCGTGCTGGTGGCCATACACATGGACGTGGACAAGCAGACTCTTGAGATGAGCTGGTGGCTCGTCTTCTCACCCTTGTTTGCTGCCGACGGCCTCAGCACGTACTTCACAGCCATCGTCTCCATACGCCTCTATCAAGAAGGAGAGAAGCGGCTGGCCGTGCTGCGCTTGCTGTGGGTGCTGACTGTGCTCAGCCTCAAGCTGGTGTGCGAGGTGCTGCTGTGCCAGAAACTGGCCGAACAGAACCAGGCACCGAATGATTTGTGGTTTGGGCTTATCGTTTCCCCACTTTTCATCCTTCTGCAGCTGCTCATGATTCGTGCTTGTCGCGTCAATTAAAGGACAAACCATCTGCACGCATGCCAGTGGACTGGTGCGAATGAAAAGGACTCCTGCAGGAGGAGTCGGTCGTTGTAAACTGCAAAATCATTGTAAacgttattttaattattattattattattattattagttttttttttttgtattcaaatgGTTCAAGCATGTGAACATGGCATCATAAACAATGCTTCAAATAATGTgcaattttgattattattgtcCTTAAGTGCTATGAGAGATTGGTCTGGGGTTTTTTCTGAATCCTGTCCATGTTGCGTTATctgtgttaatgttttattgttgtttgtacaGTTGTAAATAAACCATCAACATTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU58194 lncRNA downstream 93337 24521562 ~ 24522021 (-) True G39298
TU58192 lncRNA downstream 94971 24519667 ~ 24520387 (-) True G39296
TU58148 lncRNA downstream 124566 24414900 ~ 24490792 (-) True G39274
XR_006250987.1 lncRNA upstream 6715 24623559 ~ 24624878 (-) True LOC122345299
TU58207 lncRNA upstream 7009 24623853 ~ 24624852 (-) False LOC122345299
TU58247 lncRNA upstream 113368 24730212 ~ 24730391 (-) True G39337
TU58251 lncRNA upstream 114795 24731639 ~ 24732075 (-) True G39341
TU58240 lncRNA upstream 129828 24746672 ~ 24748576 (-) True naa38
XM_043239195.1 mRNA downstream 1615 24597087 ~ 24613743 (-) False tprn
XM_043239194.1 mRNA downstream 1628 24597087 ~ 24613730 (-) True tprn
XM_043239193.1 mRNA downstream 21242 24587724 ~ 24594116 (-) True anapc2
XM_043238812.1 mRNA downstream 30223 24546148 ~ 24585135 (-) True npr2
XM_043240303.1 mRNA downstream 84395 24530408 ~ 24530963 (-) True pmchl
XM_043239291.1 mRNA upstream 16458 24633302 ~ 24652541 (-) False traf2b
XM_043239290.1 mRNA upstream 16458 24633302 ~ 24652180 (-) False traf2b
XM_043239289.1 mRNA upstream 16458 24633302 ~ 24649136 (-) False traf2b
XM_043239287.1 mRNA upstream 16458 24633302 ~ 24649136 (-) False traf2b
XM_043239292.1 mRNA upstream 16458 24633302 ~ 24649135 (-) True traf2b
XR_006250980.1 other downstream 21242 24588028 ~ 24594116 (-) False anapc2
TU57904 other downstream 414862 24197705 ~ 24200496 (-) True G39113
TU57720 other downstream 727678 23887303 ~ 23887680 (-) True G38973
TU57636 other downstream 858770 23751880 ~ 23756588 (-) True G38917
TU57575 other downstream 1010625 23602244 ~ 23604733 (-) False LOC122345364
unassigned_transcript_960 other upstream 300976 24917820 ~ 24917893 (-) True trnan-guu_1
unassigned_transcript_961 other upstream 301161 24918005 ~ 24918076 (-) True trnak-cuu_4
unassigned_transcript_962 other upstream 307304 24924148 ~ 24924220 (-) True trnak-cuu_5
unassigned_transcript_963 other upstream 310136 24926980 ~ 24927051 (-) True trnak-cuu_6
unassigned_transcript_964 other upstream 316062 24932906 ~ 24932978 (-) True trnak-cuu_7

Expression Profile