RNA id: XM_043239301.1


Basic Information

Item Value
RNA id XM_043239301.1
length 1187
RNA type mRNA
GC content 0.48
exon number 9
gene id akr1a1a
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15472092 ~ 15477073 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGACCTTAGGGTATAAACGCTCAGTACCTGTGtcagtatgagtgtgtgtgtgctggagcGCTATCAGAGGAAAAAGGGTTCTAATTAAGCCATGGCAGCAACAATCACTCTCTCCAAGGCTCTGCAGATGCCAGCTGTGGGCTTGGGAACATGGAAAAGTGCTCCAGGACAGGTAAAGCAGGCTGTACTAGCAGCTTTAGACTGTGGCTACAGGCACATCGACTGCGCAGCAGCTTACAGCAATGAGCGAGAGGTCGGAGAGGCTCTGAGTGAGCGACTCGGAGAAGGAAAGCCTCTTAGACGAGAGGACATTTTTGTGACCTCCAAGTTGTGGAACACCAAGCACCATCCAGATGATGTGGAGGAGGCCTGCAGAAAGTCTTTGTCAGATCTGAAGCTCAGTTATCTGGACCTGTATCTCATGCACTGGCCAATGGCCTTTGAGAGAGGAGATGAACTGATGCCCCGACGGCCTGATGGCACAATTCGATATGATGACACTCATTATAGAGACACATGGGCAGCCATGGAGAAGCTGGTTGACCAGGGCCTGGTAAAAGCCATTGGCTTGTCGAACTTCAGCGCCAGACAGATTGATGACATTCTCAGTGTGGCCAAACACAAGCCAGTGGTCAACCAGGTGGAGTGCCATCCATACCTGGTTCAGACTCAGCTGGTGTGTCACTGCTGGAGTCGAGGGCTGGCGGTAACAGCCTACAGTCCTCTGGGTTCTCCTGATCGCCCGTGGGTTACACCTGGAGAAGCCCATCTGCTGGATGATCCGAGGGTGCTCGGACTGGCCAAGCGCTATAACAAGACCCCTGCTCAGGTTGTTATCAGATGGCACGTACAGAGAGGTGTTGTTTGCATCCCTAAAAGCGTCACTCCAACCAGGATCAAGCAGAACATCGAGGTGTTTGATTTTCAGTTATCTGATGAAGACATGAAAGTGATTGAGTCATTTAATAGGAATGAGAGGCTTATCATTCCAACTATAATGAAAGATGGAAAAAAGGTCTGGAGAGATGCAAATCACCCTCATTTTCCTTTCAGTGATTCATATTGATCAAATGCAGCAGAAAATGTGTAAACCTCTTAGAAATTTAATCGTAAaatgacatgcatttaaatgtgttcatgATTTTATGGTGAACCATTAAAGACAAGATTTAAACCAGAGCAAACTA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0008106 alcohol dehydrogenase (NADP+) activity molecular_function

KEGG:

id description
K00011 AKR1B; aldehyde reductase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54241 lncRNA downstream 302734 15169047 ~ 15169358 (-) True G36811
TU54112 lncRNA downstream 566471 14905385 ~ 14905621 (-) True G36714
TU54099 lncRNA downstream 591027 14880865 ~ 14881065 (-) True G36708
TU54076 lncRNA downstream 773139 14698736 ~ 14698953 (-) True G36696
TU54002 lncRNA downstream 819699 14652095 ~ 14652393 (-) True G36631
TU54472 lncRNA upstream 84649 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 85075 15562148 ~ 15562363 (-) True G36968
TU54475 lncRNA upstream 87025 15564098 ~ 15565262 (-) True G36969
TU54502 lncRNA upstream 226679 15703752 ~ 15709388 (-) False cenpv
TU54544 lncRNA upstream 236602 15713675 ~ 15713975 (-) True G36986
XM_043238413.1 mRNA downstream 14721 15451024 ~ 15457371 (-) True eef2l2
XM_043240656.1 mRNA downstream 104679 15350016 ~ 15367413 (-) False npr3
XM_043240654.1 mRNA downstream 104679 15350016 ~ 15367413 (-) True npr3
XM_043238862.1 mRNA downstream 163652 15293856 ~ 15308440 (-) True zfr
XM_043239960.1 mRNA downstream 179210 15280214 ~ 15292882 (-) True mtmr12
XM_043240356.1 mRNA upstream 3107 15480180 ~ 15493670 (-) False dnajb5
XM_043240355.1 mRNA upstream 3107 15480180 ~ 15493594 (-) False dnajb5
XM_043240354.1 mRNA upstream 3107 15480180 ~ 15493024 (-) True dnajb5
XM_043239504.1 mRNA upstream 28893 15505966 ~ 15529346 (-) True epg5
XM_043238806.1 mRNA upstream 53001 15530074 ~ 15534492 (-) True riok2
XR_006251075.1 other downstream 104679 15350016 ~ 15367413 (-) False npr3
XR_006250970.1 other downstream 163652 15296018 ~ 15308440 (-) False zfr
XR_006251010.1 other downstream 207147 15205951 ~ 15264945 (-) False pdzd2
TU53907 other downstream 1169711 14292063 ~ 14302381 (-) True LOC122345141
XR_006250967.1 other downstream 1415387 14045477 ~ 14056705 (-) True rnf214
TU54482 other upstream 96038 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 96185 15573258 ~ 15574817 (-) False alkbh2
TU54499 other upstream 226679 15703752 ~ 15709388 (-) True cenpv
TU54667 other upstream 247954 15725027 ~ 15727910 (-) True emc6
TU54666 other upstream 249709 15726782 ~ 15727910 (-) False emc6

Expression Profile