RNA id: XM_043239362.1


Basic Information

Item Value
RNA id XM_043239362.1
length 2585
RNA type mRNA
GC content 0.49
exon number 1
gene id fzd9a
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24070279 ~ 24072863 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TAAGAGCACAACGAGGAGCGAACGGGAAGCGCGATGTCCCCGCGCGTGGAGCCGCGTAACATCGGAAGACGCTTTCAACCCGTCCTGCTCGTTACTGAACGTTTATTCTCGCGGACGTGAACGGGAACGGTCAACTGAGCGAAACTCTTCTGAAAAGAGCTTGCTGTGAAGGGCTTTAAAGTTTGAAATGCTATGCCGGCGCACGAGATGATAGTTCTGACATCTGTGATTGATTGTTCGGATTAATCGTCTTTGAAAGTTCTTCCTTCACTTCTAGACGTTTTGGATAGATATATTATAACCGAATCACAATGGATTTGCTGACAGTGACATGACAATGAAGATTtccaaactgaaatatttttcttctttaaaacaaCTGGACGTTCAGTGTCAGTTACTGTATGATGAAGCATGAATTGAGTTTCTGCTATAAACAAAACATCATCTGCATGGCATTGGACGTGCTAATCGTTTTAAGACTTTCTTGAGGTTATCACAATGGCCCGTCGCGTACAGATCGTGATTGTACTTTTCCAGCTGATGATGGCCGGATCTGCACTGGAGATTGGAGCGTATGATTTGGAGCGCGGCCGTCCGTCAAAATGTGAGCCCATCACCATTACCATGTGCCAGGGAATCGGCTACAACATGACACGGATGCCCAACTTCATGAATTATGAAAGCCAAGAGGAAGCTAGCGTTAAACTGAACGAATTCGCTCCTCTGGTGGAGTACGGATGTGATGTCCACTTGCGATTTTTCCTGTGCTCTTTGTACGTGCCAATGTGCGCCGATCAAGTGTCCGCCACTATCCCAGCGTGCCGCCCTATGTGCGAACAAGCAAGACAGAGGTGTTCACCCATAATGGAACAGTTCAGCTTCAGGTGGCCGGACTCACTGGATTGCTCAAAGCTGCCAACCAACAACGACCCGAACGCATTGTGCATCGAAGCTCCTGAAAATGACACTCAGCCTGAGACTAAGAAAGGCGAGGGAATGCTGCCAGTACTTCCGAGGTCCAGGGAACCCACAGCAGGGAGTGGACGTACCTCAAGCGGCCTGCGGTCCTGTGATAACCCGGAGAAGTTCCAGTACGTGGACAAGAGCGAGTCATGCGCGCCTCGTTGCACCCCTACGGTGGATGTCTACTGGTCTAGGCAAGATAAGGACTTTGCATTCATTTGGATGGTGGTGTGGTCAACGCTTTGCTTTGTTTCTACAGCATTCACAGTACTTACCTTCCTCCTGGACCCCCAGCGCTTCCAGTACCCCGAACGTCCCATCATCTTCCTCTCCATGTGCTACAACGTCTACTCGGTGGCCTTCATCATCCGTTCGGTGGCTGGGGCTGAGAATATTGCTTGCGATCGGGAAAACGGAGAGCTATACATCATCCGGGAGGGTTTGGAGAGCACAGGGTGTACCATAGTCTTCCTCATCCTCTATTACTTTGGCATGGCCAGCTCCATTTGGTGGGTCATCCTCACCCTCACTTGGTTCCTTGCAGCGGGACGAAAATGGGGCCACGAGGCTATCGAGGCACACAGTAGCTACTTCCATATGGCCGCCTGGGGCATTCCTGCGGTGAAGACCATAGTCATCCTCACTATGAGGAAGGTGGCCGGGGACGAGTTGACGGGATTGTGTTACGTGGGCAGCATGGACAGCAATGCTCTCACTTTCTTTGTCTTGATCCCTCTATCCTGTTATCTCATTGTTGGGACTTCTTTCATTCTCACGGGGTTCGTGGCGCTCTTTCACATCCGCAAAGTCATGAAAACCGGGGGCACAAACACCGAAAAACTGGAGAAGCTCATGGTTAAGATCGGAGTCTTTTCCATTCTCTACACGGTGCCTGCTACTATTGTTATCATATGCTATTTCTACGAAAGGCTCAACATGGAATACTGGAAGTTCCAAGCCCTGGAAAACAAGTGCATGTCCTTTCCCGGTCGCAGAAGCGAGGACTGCACCTTGGACTCGTCGGTTCCCACCGTGGCCGTGTTCATGCTCAAAATTTTCATGTCATTAGTGGTGGGCATCACTAGTGGGGTTTGGGTGTGGAGCTCAAAGACGCTTCAGACCTGGCAGGGGTTGTGCAACAGGAGGTTGGCCGTGCAAACAAACCGCAAGCCCTGCTCCAGTGTCAGCTGCAGCAGCTCCCACTGTCATTACAAAGCACCGGCTGTGACACTTCACATGAATAAAACAGACATGTACACAGACAGTCCCACGCACGTTTGAGACTAAAAGCCTCCTCTGTGAAGCCTTGCACAGACTTTTGAGGCCCGTATCGTGATGAAACGCTCAGGTTATACGAATGCAGATCGGTTGTACATTTGTCGGGGGTGGCATTTCGTTGACATAGCAGAGGTCACCTCAATAAAAACGAAAAGGTTTGTCGTACGGAATGAACGCAGCAAATTACagaatgctttatttattgtggATATTTAAGTATTGCTGGTTGTATAGTTTTGTACTGTATGTGCTGTACTGTATATAAGGaagagttttaaataattttacagtatgttatatttttctcaaaagaggaacaataaagcatttattataatgta

Function

GO: NA

KEGG:

id description
K02842 FZD9_10, CD349_50; frizzled 9/10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU57811 lncRNA downstream 365 24068630 ~ 24069914 (-) True G39050
TU57774 lncRNA downstream 72540 23979664 ~ 23997739 (-) False aatf
TU57791 lncRNA downstream 91752 23977176 ~ 23978527 (-) True G39034
TU57729 lncRNA downstream 167381 23902619 ~ 23902898 (-) True G38982
TU57600 lncRNA downstream 400410 23666841 ~ 23669869 (-) True G38892
TU57825 lncRNA upstream 15017 24087880 ~ 24088812 (-) True G39057
TU57828 lncRNA upstream 28978 24101841 ~ 24107022 (-) False G39059
TU57829 lncRNA upstream 28978 24101841 ~ 24107263 (-) True G39059
TU57919 lncRNA upstream 139579 24212442 ~ 24212759 (-) True G39120
TU57920 lncRNA upstream 141663 24214526 ~ 24215160 (-) True G39121
XM_043239404.1 mRNA downstream 27542 24039706 ~ 24042737 (-) True mrm1
XM_043239401.1 mRNA downstream 74003 23991291 ~ 23996276 (-) True lhx1b
XM_043239366.1 mRNA downstream 79779 23980749 ~ 23990500 (-) False aatf
XM_043239365.1 mRNA downstream 79779 23980749 ~ 23990500 (-) True aatf
XM_043239359.1 mRNA downstream 329883 23733743 ~ 23740396 (-) True tmem232
XM_043239415.1 mRNA upstream 9583 24082446 ~ 24086504 (-) False fkbp6
XM_043239414.1 mRNA upstream 9583 24082446 ~ 24086498 (-) True fkbp6
XM_043239416.1 mRNA upstream 9583 24082446 ~ 24086497 (-) False fkbp6
XM_043239433.1 mRNA upstream 19517 24092380 ~ 24098174 (-) True tmem150ab
XM_043239432.1 mRNA upstream 19517 24092380 ~ 24098112 (-) False tmem150ab
TU57720 other downstream 182599 23887303 ~ 23887680 (-) True G38973
TU57636 other downstream 313691 23751880 ~ 23756588 (-) True G38917
TU57575 other downstream 465546 23602244 ~ 23604733 (-) False LOC122345364
XR_006251119.1 other downstream 2030245 22039901 ~ 22040034 (-) True LOC122346224
XR_006251116.1 other downstream 2110395 21959785 ~ 21959884 (-) True LOC122346220
TU57904 other upstream 124842 24197705 ~ 24200496 (-) True G39113
XR_006250980.1 other upstream 515165 24588028 ~ 24594116 (-) False anapc2
unassigned_transcript_960 other upstream 844957 24917820 ~ 24917893 (-) True trnan-guu_1
unassigned_transcript_961 other upstream 845142 24918005 ~ 24918076 (-) True trnak-cuu_4
unassigned_transcript_962 other upstream 851285 24924148 ~ 24924220 (-) True trnak-cuu_5

Expression Profile