RNA id: XM_043239414.1


Basic Information

Item Value
RNA id XM_043239414.1
length 1886
RNA type mRNA
GC content 0.42
exon number 8
gene id fkbp6
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24082446 ~ 24086504 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tctttctatctttttaatgtttcgttttttattttaatgttgttttcttgacaacactttttttttttttacgtaaaaGGTAGGTTTGCGCGACACGGTCGTAAAACGTCGTGAAGTCGATTCTGGAATCCATTTTGAACACGTCATTCCGTAACCGCCGCGTCACGTGGTTTCAGAAAAGCGTGTCGTTTTTAcgatatattttgcatattttacattaagcAAAAACAATTCCGTTTCATATGCACATAGATTACGTtgaatttgtcatatttttttatttatttaattaaacgttAATTTCAACATCACAGTGCCGGTCTCTAGTTGGCGCAGGTGTGGCGCACGCTGGTGGTGACGTGCTGCATGAGTCCAGTCCGCTCTTGCAGATTGACTTCTTTAGAAAGTGTTTTGATCTAAATACACATGCACGATGTCAACAAACGGCAAGACCTCGAGAATATTGCAGTTCATGGCCCCTGGTGAGCGCCGTCAGTTTGGAATCGAGACTCCATTCCAGCGTCTGGCTTGGCAAATGCAAGACATATTAGGAGACAGAGGGATTCTCAAAGAGGTGGTTCATGCAGGAGAAGGTCCACCTGTACCCAGACATGCCTCTGTGTCAATTCATTTCTCTGGATTCATTGAGTACTCTGATGCACCATTTGAGACAACCAGCCACCTTAAATATCCACGAATGATGAAGCTCGGTAGAGATGTTACTTTGTACGGCCTAGAGCTTGGTCTGCTCACTATGAAGAAAGGCGAGTTTTCCCGTTTTCTTTTCAACCCCAAATATGCCTATGGGATCCTCGGATGCCCCCCACACATACCTCCATTAGCCACAGTCCTCTATGAAGTGCAAGTCCTCGATTTTCTGGACTCTGCACAAGTGGATGAATTCATGGATTTGAGTATGGAAGAGCAGAACAATGTTCCTCTGTCCACATTTCTGAATATACTGGACACGCAGCGGAGCTTCGGCAACCTCTGCTTCAATAAGAAGCGCTATGAAGATGCTCGAGAGCGATACAAACAGGCCATGACACTTTTGCAGAATCGTGAGCTGGTggagaaagaagagaagaagcGTGTTGACGAAATGAAACTGCCTCTTCTGCTCAACCTCTCACTCACGTACCTCAAACTGGAGAAACCCCAGAAGGCCCTCTGCTACGGTCAGAAAGCGCTGGACATCAGCCCTCAGAACACTAAAGCTCTCTTCCGCTGCGGACAGGCCTGTTTGGAGATGACTGAATACGAGAAGGCACAAGATTACCTTACGCTCGCTCAGAAGAAAAAGCCATTTGACCCTGACATCAACGCCTTGCTGAAAAAGCTCGCTATCTGCTACAAGGACTATCtggacaaagagagagacatgtGCTCCAAGATGTTCCCGGGTTTTAAAGGAATGAAAAAGTGAAGCGCTTTTACCATTTCTCAAACCCTCCAGATGGACCACAAGTCGGCAGTATAAACCCaacaaattgtaattttggtGTGAGCTGTCAACATGGCCTAAAATCTTGTCCTACTTTTAATTGCTCGTAGctcacttttattttgcattcattcGTGCACGTATTTTGTAACATATTATGTTCTCTATGTTATTGTAAGATAAGCTTTATCATGACAGACGGTCAGGGTTTTCAATACTCTATATGGAGCATCAGGATGCCTTCCAAGTGTGGAGCTGGATTGTCAGAAGttgcttttacttttatgttCAATTTTGAAGTTAGCTTGAAAACAATAAGTTGTTACGCCTTGCTCATAGTTTCGAAATTGCTTTAGATTTGCGTGGAGTTTAATAATACTGtataagataaaatatacacgtgctttaattttgtttactgtaataaaaaccaaaaaacgtC

Function

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0016020 membrane cellular_component
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09572 FKBP6; FK506-binding protein 6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU57811 lncRNA downstream 12532 24068630 ~ 24069914 (-) True G39050
TU57774 lncRNA downstream 84707 23979664 ~ 23997739 (-) False aatf
TU57791 lncRNA downstream 103919 23977176 ~ 23978527 (-) True G39034
TU57729 lncRNA downstream 179548 23902619 ~ 23902898 (-) True G38982
TU57600 lncRNA downstream 412577 23666841 ~ 23669869 (-) True G38892
TU57825 lncRNA upstream 1382 24087880 ~ 24088812 (-) True G39057
TU57828 lncRNA upstream 15343 24101841 ~ 24107022 (-) False G39059
TU57829 lncRNA upstream 15343 24101841 ~ 24107263 (-) True G39059
TU57919 lncRNA upstream 125944 24212442 ~ 24212759 (-) True G39120
TU57920 lncRNA upstream 128028 24214526 ~ 24215160 (-) True G39121
XM_043239362.1 mRNA downstream 9583 24070279 ~ 24072863 (-) True fzd9a
XM_043239404.1 mRNA downstream 39709 24039706 ~ 24042737 (-) True mrm1
XM_043239401.1 mRNA downstream 86170 23991291 ~ 23996276 (-) True lhx1b
XM_043239366.1 mRNA downstream 91946 23980749 ~ 23990500 (-) False aatf
XM_043239433.1 mRNA upstream 5882 24092380 ~ 24098174 (-) True tmem150ab
XM_043239432.1 mRNA upstream 5882 24092380 ~ 24098112 (-) False tmem150ab
XM_043239434.1 mRNA upstream 5882 24092380 ~ 24098012 (-) False tmem150ab
XM_043239342.1 mRNA upstream 79710 24166208 ~ 24187485 (-) True ntrk2b
XM_043239461.1 mRNA upstream 143848 24230346 ~ 24252631 (-) True pcsk5a
TU57720 other downstream 194766 23887303 ~ 23887680 (-) True G38973
TU57636 other downstream 325858 23751880 ~ 23756588 (-) True G38917
TU57575 other downstream 477713 23602244 ~ 23604733 (-) False LOC122345364
XR_006251119.1 other downstream 2042412 22039901 ~ 22040034 (-) True LOC122346224
XR_006251116.1 other downstream 2122562 21959785 ~ 21959884 (-) True LOC122346220
TU57904 other upstream 111207 24197705 ~ 24200496 (-) True G39113
XR_006250980.1 other upstream 501530 24588028 ~ 24594116 (-) False anapc2
unassigned_transcript_960 other upstream 831322 24917820 ~ 24917893 (-) True trnan-guu_1
unassigned_transcript_961 other upstream 831507 24918005 ~ 24918076 (-) True trnak-cuu_4
unassigned_transcript_962 other upstream 837650 24924148 ~ 24924220 (-) True trnak-cuu_5

Expression Profile