RNA id: XM_043239435.1



Basic Information


Item Value
RNA id XM_043239435.1
length 1175
RNA type mRNA
GC content 0.42
exon number 4
gene id btg4
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23446697 ~ 23448138 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACACCTTGAATATATTTGTTGTGGTGCCTTAAGATGGTTTTGTGTAGCTGAAGCAGAACAATAGCTTGAGATTTACTTAAGCAGCTGTGTTAATGAGCAAGTTGTTTGCTTCTTTGagtgtgattttatatttttaacttattttaaaaaacaaaaaaatccgtCCGCTTGGTCTGTCGGCTGCTgatcttaatatttaaaaatgaaggaaGAGATTGCAGCAACAGTGTTCTTCGTTGCAAGACTAgcaaaaaaacatggcaaaCTGGATCGTGTCAGGAGGGAGAAGTTTGCTGTGGAGCTGACCTCTGTGCTCTTTGAAAACTACAAGAGTCACTGGTACCCAGAAAACCCAACTAAAGGACAAGCTTTCAGatgtTTAAGGATGAACAAAGCTCAAACGAGAGACCCGGTTATTGAACGTGCCTGTCGCCAGAGTGACGTTGTTTATGACAGTCTTGGCTTACCAAAGGAAATGACCATTTGGGTCGATCCGGGAGAGGTGTCATGTCGGTATGGTGAGAAGTCAACCCCATTTTGTGTTACTCAGTTGGAGGGTCAAAAGAGAGATGGGGAATTCTCTCGTAGGATAAACAATGCAGTGGAAAGGGCTTCATCGGACTATCATTCTGGAACCTCCTCGGACGAGGAGGGAGGAAACACCAGCATGAGCAGCAGCATAAGTAGCAACTACAGCAGTAATAGCAGCAGCATTTCTGTTCCGGAGCCTAAATGCATCCCAACGGTCTCCAACCCGAACAGCGTCTACCAGTTCAGTGAGTTCGGGCAGCCCCCACCTATGCAGAACTGGGGCACTTACCCTAAAAGAAAACCATATGAGGGCTACCAGCAGCATTCCTCAAGTGGACCATACCCACCTCATAAGAGTTTCAAGGGCTACAGGCCCTCCTATGCATTCTCTGGTCCAAGGGTGGACCGATATCATTGGGTCAGCAAGAACCGTTcctagaggtttttttttttttttttttttttaaaccagtgtATTGTTTTGCTGCGCAGCTATGCAGGCATAtgtgaatttatataaatttctaTGTGgaactttaaattatttatggaATTATGGCAATTCCACAAGTactttttaagagttttaatgatttatttgtggagtggaaaagactttctaaataaaatctcttttaaTAAAA

Function


GO: NA

KEGG:

id description
K14443 TOB; protein Tob/BTG

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU57397 lncRNA downstream 88550 23357574 ~ 23358147 (-) True G38769
TU57395 lncRNA downstream 100900 23345589 ~ 23345797 (-) True G38767
TU57383 lncRNA downstream 314698 23127219 ~ 23131999 (-) False nrgna
TU57350 lncRNA downstream 409227 23036457 ~ 23037470 (-) True G38747
TU57216 lncRNA downstream 570260 22873971 ~ 22876437 (-) True G38658
XR_006250995.1 lncRNA upstream 154098 23602236 ~ 23605748 (-) True LOC122345364
TU57600 lncRNA upstream 218703 23666841 ~ 23669869 (-) True G38892
TU57729 lncRNA upstream 454481 23902619 ~ 23902898 (-) True G38982
TU57791 lncRNA upstream 529038 23977176 ~ 23978527 (-) True G39034
TU57774 lncRNA upstream 531526 23979664 ~ 23997739 (-) False aatf
XM_043239346.1 mRNA downstream 35545 23394164 ~ 23411152 (-) True LOC122345314
XM_043239344.1 mRNA downstream 35545 23397430 ~ 23411152 (-) False LOC122345314
XM_043239345.1 mRNA downstream 35546 23394164 ~ 23411151 (-) False LOC122345314
XM_043240775.1 mRNA downstream 314689 23127212 ~ 23132008 (-) True nrgna
XM_043238281.1 mRNA downstream 327553 23105929 ~ 23119144 (-) True hepacamb
XM_043239361.1 mRNA upstream 47000 23495138 ~ 23505743 (-) True ppp2r1ba
XM_043239354.1 mRNA upstream 62040 23510178 ~ 23518148 (-) True alg9
XM_043239355.1 mRNA upstream 62040 23510178 ~ 23518147 (-) False alg9
XM_043239403.1 mRNA upstream 71122 23519260 ~ 23523750 (-) True fdxacb1
XM_043239440.1 mRNA upstream 78440 23526578 ~ 23528254 (-) True ufc1
XR_006251119.1 other downstream 1406663 22039901 ~ 22040034 (-) True LOC122346224
XR_006251116.1 other downstream 1486813 21959785 ~ 21959884 (-) True LOC122346220
XR_006250934.1 other downstream 1562675 21878156 ~ 21884022 (-) False LOC122344823
XR_006250933.1 other downstream 1562675 21878156 ~ 21884022 (-) False LOC122344823
XR_006251046.1 other downstream 1620592 21809013 ~ 21826105 (-) False akap10
TU57575 other upstream 154106 23602244 ~ 23604733 (-) False LOC122345364
TU57636 other upstream 303742 23751880 ~ 23756588 (-) True G38917
TU57720 other upstream 439165 23887303 ~ 23887680 (-) True G38973
TU57904 other upstream 749567 24197705 ~ 24200496 (-) True G39113
XR_006250980.1 other upstream 1139890 24588028 ~ 24594116 (-) False anapc2

Expression Profile