RNA id: XM_043239489.1


Basic Information

Item Value
RNA id XM_043239489.1
length 5889
RNA type mRNA
GC content 0.48
exon number 29
gene id gak
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 487044 ~ 511879 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCCCCACGTCAGCACCTTGCGGAAATACCGCTGAGGGAGAGCAGGTCGATCGGAACCAGCGCTCGGGATGTTTTCATCCTAGAAAAGCGAGTTTCTAATCCAAATTAACGCTCTGGTATCTAGCTACGCCATTAGTCGAGTGAGCGCGCTTGTTCTCCCATCCGGTGCCGGTTCCGGTAAATAGGCGCAACAGTAAAAGAGGGACAAGATGTCCCTGTTCCAGTCAGCGCTCGATTTCCTGGCCGGGCCCGGCGGATCCGCCGCCGCCAGCCGGGATCAGAACGACTTCGTCGGGCAGGTAGTGGAGCTCGGAGAGCTGAAGCTCCGGATCAAACGAGTCATCGCTGAAGGTGGCTTTGCGTTTGTGTATGAAGCCCAGGATTTGGGTAGCAGTAAGGACTATGCGCTCAAGAGACTTCTCTCCAATGAAGAGGAGAAGAACAAAGCCATCATTCAGGAAGTCTGCTTCATGAAAAAGCTGTCTGGTCACCCCAATATTGTGCAGTTCTGCTCGGCTGCGTCTATCAGTAAGGAAGAGTCGGACACGGGCCAGGCTGAGTTCCTCATCCTCACAGAGCTGTGTAGAGGCCAGCTGGTTGATTTTGTGAAGAAGGTGGAGCAGAGAGGACCCATGTCATGTGACACAGTGCTGAAGATCTTTTACCAGTCATGTCGCGCTGTGCAGCACATGCACAAACAGTCTCCACCAGTCATACACCGCGACCTGAAGATTGAGAATTTATTGATCAGTCATCAGGGCACTATAAAGCTGTGTGACTTCGGCAGCTCCACCACCGTGGCACATTACCCAGACTACAGCTGGTCTGCTCACAAGAGATCTATGGTGGAAGacgagATTACTAGAAACACGACTCCAGCGTACCGGACACCAGAGATGATTGACCTCTATTCCAACTACCCaataaatgagaaacaagacaTATGGGCTCTCGGCTGCATCCTGTACCTGCTCTGTTTTAAGCAGCATCCATTTGAAGAAGGAGCCAAACTCCAGATAGTAAATGGCAAATACAACATTCCCCAGAATGACACCAAGTACACAGTCTTTCACCAACTCATCCGATCGATGTTGAAAATCAACCCGGATGAGCGACTGTCAATCAACGAGCTTGTTAGTCAGCTGCAGGAGATCGCTGCGGCCAGGAACGTCAACCCAAAATCCCCCATTACCGAGCTCCTGGAGCAGAACGGAGGGTTCGGGAACAACAGCGCTCAGCTTCCCTCGCAGATCAACAACATACACAATGCTGgtgTGTATGAAACAGACCCGGCCATGGGCGGAGGCTTCCTGGATATTCTTAAAGGCGGAACCGAAAGATTCCTCACCAACATCAAAGACACTTCCTCCAAAGTCATCCAGTCGGTGGCCAGCTCCAGTTATGCTAAAGGAGACCTGGACCTGTCCTACATCACCTCCAGAGTAGCAGtCATGTCTTTCCCAGCCGAAGGTGTCGAATCTGCCATTAAGAATAACATTGAGGACGTGCGTCTGTTCCTGGATTCTCGACACGCTGGTCATTACGCAGTTTACAACCTCTCCAAACGCTCCTACAGACCGGCCAGGTTTCACAACAGGGTATCAGAGTGTGGCTGGCAACCGAGACGAGCTCCTACACTGAAAAACCTGTACAGTATCTGTAAAAACATGCACCAGTGGCTCAAACAGGACCAGAGGAACATCTGCATCGTACATTGTCTGGATGGTCGGGCAGCGTCAGCTGTGGTGGTTTGTGCCTTCCTCTGTTTCTGCCGTCTGTTCTCGACAGCTGAGGCTGCAGTTTACATGTTCAGTATGAAGCGATGCCCACCAGGCATCTCAGCCTCGCACAAACGgtATATTGAGTACATGTGTGATATGATGGCAGAAGAGCCTATAATTCCCCACAGCAAGCCCATAACCATCCGCTCCGTCGCCATGACTCCCGTACCGCTCTTTAATAAGCAGAGAAATGGCTGTCGGCCGTTCTGTGAGGTTTACGTCGGTGACGAGCGCGTGGCAACCACTTCACAGGAATATGACAGAATGAAGGATTTTAAGATGGAGGACGGGCGAGCGGAGATTCCTCTGAATATAACTGTGCAGGGAGACGTGCTGATAGTGATTTATCACGCACGCTCAACGCTGGGCGGACGTCTGCAGGCCAAAATGGCTTCCATGAAGATGTTTCAGATTCAGTTCCATACTGGGTTTGTGCCCAGAAACGCCTCCACTGTCAAATTTGCAAAGTATGATCTCGACGCGTGCGACATCCAGGAGAAATACCCTGACCTCTTCCAGGTGCATGTAAATGTGGAGGTGGAGCCTCAGGATCGTCCTAGCAACAAGACTCCGCCTTGGGAAAACTTTGCCACCAAAGGACTCAATCCCAAAATCCTTTTCTCCAGCCGAGATGAACAGCAAGAGATCCTGACAAAATTTGGTAAACCAGAGCTCCCACGTCAGCCTGGTTCCACGGCGTGTTACACCTCTGAACCGGCCCAGCCGGAGCGTTCCCCTGAAGGGCCACCGACGGACCCGGATTCCCCTTCTCCTCAAAGCACCGACTCCAACGCCAACAACTTCTTCCAGACGCTCGACTGGGATGATGGCAGTCGGCAGTTCGATCGTTCTGACAGCCAGTTGGAGGACCAGGATGATTTGAGCGGCGGCTCTGAGGAGGAATCGGTGTCTTACTCCGCCCCCGTCGACGGGACTCTGTCACGTGACACTAGTGAACCACTCTTCGAGGCAGACTTCACAAACACACCACCTGACCCTCAGCCCGATACGGAGGACCTGCTCGGCCTGAACTCTGACCCCTGTCCTCCAGCCGCCAATACTCAGCCAGGCGCTGTTAATGAGACGGGTTTGAAAAGTTCTGCCAGTAACAGCGATTTACTGAACGACCTGTTTGCTCCTCCACCCAATGCTGTGCCTTCAGCTAATGCAGAAGACCTGATGGGAGAAAGCACGGGAGAAGATCTCTTCTTCTCCAACACATCCAGCCAACAGGCTCCAACCGCTAATAAAGACTTCTTTGACCCCTTCGGTGTGGGGTCAGCCTCTTCAGGCTCCGATCTGTTTGGTGACCTCCTGGGGTCAGACGGCGCGAGCAGCGGCTTCAAAGCTCCGGCTCCTGCGTCCAACTCCAGCCTCTTCAACCTCAATAAGTTAGCAAGCGAGACTCCTAAGATGACATCGTCAGCGAGTCAGCCTGATCTGTTAGGAGGCTGGGAAAACTGGAGCGCAGGAGGATCCAGCACGACTCCTAACATGACCGCTGCGGCCAGCAAACCCACTATGAGTGCCTCAGGAGTCTCATCTTTCTCCAAAGCCAAATCTCAAAGCTTTGACCCCTTCGCAGACCTGGGCAACCTGGGCTCAACACTACCTGGTTCGTCCAGTGCTGGTTTCTCTGGCTCAGGTTTTAAAACGGCGCCCTCCACGGGAATCTCTAAGAACTCAGGTCAGCAGTGGCAGCAGACTCCTCGGCCGTCCTCTGGCCCCAGCAAACCCTGGATGCCTCCGAACTCAGCGACTAGGCAGCAAACCCAGCCCTCCCAACCGGCTAAACCAAACTACAACCCTAGTTTCAGCGTGATCGGTGGACGAGAAGAGAGGGGCATCCGTGGGCCAGGCTTTGGTCCAAAGCCCAAAGTGAAACTAGATGACTTTGAGGATCTGTTATCAACGCAGGGTTTTGGCTCCAGACCGGACAAGAAGATGCCCAGAACTATTGCTGAGATGAGGAAGCAGGAGCTGTCTAAAGACATGGACCCTCTCAAACTTCAGATCTTAGACTGGATCGAGGGGAAGGAGAGGAACATCCGAGCGCTGCTCTCCACGCTTCACACGGTCCTGTGGGAGGGAGAGACCCGCTGGAAACCCGTCAACATGGCAGATCTGGTCACACCTGATCAGGTGAAGAGGGTCTACAGGAAGGCTGTGCTTGTTGTGCACCCAGACAAGGCTACAGGTCAGCCGTACGAGCAGTACGCTAAAATGATCTTCATGGAGCTGAGCGATGCCTGGTCCGAGTTCGAGAACCAAGGAGCCAAAGCCCTGTTCTGAGCGTGCTCAGCGAGCGTCTGCCAGGAGCGGCGGGCCCCCTACAGGCAGCCTGAGGCACAGCGCTCTCtccatacacacagacacacgtcTCTGAGAGAGTCTGACAGTCAGACAGAACAATCAGAGAAGGAAAACGGACCTCTTTCTGCTCGAGGAACAGTCTAATCTCTTCCTGAACTCTGGAGTGAAATGTGTGGCGCTGGATCTCTCCTCCTTCAAAAGGGGAACATGCTAGCATCCTTTCGGCATTTGTAGATGAATAAAAACcatgcgcgcgcacacacaccccAACACCCGAGACTACAGTCTGTGTCTTGCACTTCAAAAGAGCTCCAAAACAGATGGTTTCTGGGATGACGACGAAAGGATTCTTTTTCATCTCATTCTGTGCATCGCTATTGTTTTCACTTTTAGTTTTTCAATCAGTGTGGTTTGTCATTTACTGATGTAAATAATCACTcgactcgtgtgtgtgtgtgtgtgtgcttgtgtgtccAGGGGTGGATCATGTTCATATGAAGCTAAAGCAGATGTTTTGACTTCTGTTTTTCCACGGTGTGAAGGCTTTTGATCACTTTCACTTCATTTTCGTCATGTTTTCACAGATCTCTAGTGTTAATTCTCTCCAGGCACCTTGTGGGAAGGCGCGTTGGCGTATTTGTGGGTTCAGGGCTCCATTTCCACAGTCCAAAGGGTATTTCAGTGACCGAAAACAAACTTAACATCAACAAAAGTGTGAGCTTtccatatataatttttttttttttttttaaatctcaaggACCAATCAGAAACGTCTGTCTTATTTATTGTTCTGAAAGCTGTACATGACTAATTgatggaaataaaaaaggacTAAAATAACGGATTTATTGTAAACGATGGAACAAACAAGCTAAGCATTTTGCAGAACTAAATCATTCCAAAGCATCCACTAATATGAATGTGCTTTTTAAGATTATTGCTGGAATgtaacttttgtttgtttttttttgtaccatttatcatattttccacaatattttatttttgtttccgtGATCTCTTAATTAATGACACTAGAAAGTTTGCACCGATCCCTCAGGACATCACGCCAAATTCAGTGTCcgattgtacaaaaaaaataaattaaaaaaagacaatgacGTGAGGGTGGAAATCAGTGCTGTTTTTATACGTAGACCAATAGTTTGAAATATTtcatcttattaaaaaaaaaaataaaaatcaaggaCTGGAAGGAAATGCTGATTCGTGAAGACTTTATTGCCATTATTCTTGTATTATGCTCGGAGATGACTAGACAAAACCAAATCCCTTATCtagttttgagaaaaaaacattcgCGGTTAAAGGTTCAGTGTTTGGAGAGGTTTTGGAAATCTTTTGGCTTATTCACCTTCCGCCAAagtcataaatgttttaaactggATTGTGGTGTTTGTGTTCAAAATCTTTATTGGTTGCATAATTAGTGATGTCGAATGGGCTCTGATTGAAATGAATGACATAATTTAgtctataaataaatgttcttattctgtgaatatatacatatctatataatatacactTATCCCCAAGAAACGAACAGTGCTGCTGCATTTCGGTGGAGAGATATTAGAACACCTCCTGATAAGACACTTTTTCACTCTTTTCGTCCACTCAGCTTTCCTTTGGATGTCAAACTAGTGTTTTTCACCAGCTGTCTCCCGCAGTGGAGAACAAAATCATAACACCActgtcttaaatatatttttgtcatattttcttttgtcaGATTTTGACCAATAAACCATAATCATGGTTCGGGTTTA

Function

GO: NA

KEGG:

id description
K08855 GAK; cyclin G-associated kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47495 lncRNA downstream 1274 484962 ~ 485770 (-) True G32201
TU47485 lncRNA downstream 3635 477761 ~ 483409 (-) True G32193
TU47477 lncRNA downstream 7163 464014 ~ 479881 (-) True G32187
TU47504 lncRNA upstream 61456 573335 ~ 583065 (-) False ddr2l
TU47514 lncRNA upstream 110845 622724 ~ 625747 (-) False wdr31
TU47535 lncRNA upstream 179539 691418 ~ 691700 (-) True G32230
TU47544 lncRNA upstream 192355 704234 ~ 704604 (-) True G32239
TU47550 lncRNA upstream 206258 718137 ~ 718410 (-) True G32245
XM_043240768.1 mRNA downstream 75951 399992 ~ 411093 (-) False lrp13
XM_043240767.1 mRNA downstream 75951 399992 ~ 411093 (-) True lrp13
XM_043240769.1 mRNA downstream 87361 398419 ~ 399683 (-) True si:ch211-12e13.10
XM_043240378.1 mRNA downstream 99166 382845 ~ 387878 (-) True kcnv2b
XM_043240376.1 mRNA downstream 114226 371671 ~ 372818 (-) True LOC122345880
XM_043239576.1 mRNA upstream 1553 513432 ~ 549044 (-) True sh2b3
XM_043240366.1 mRNA upstream 37922 549801 ~ 555622 (-) True pheta1
XM_043239731.1 mRNA upstream 44775 556654 ~ 583095 (-) True ddr2l
XM_043239732.1 mRNA upstream 44775 556654 ~ 581186 (-) False ddr2l
XM_043239733.1 mRNA upstream 44775 556654 ~ 575965 (-) False ddr2l
TU47390 other downstream 237289 246943 ~ 249755 (-) False rictora
TU47359 other downstream 450696 35777 ~ 36348 (-) True G32104
TU47358 other downstream 452327 33779 ~ 34717 (-) True G32103
TU47356 other downstream 463095 20139 ~ 23949 (-) True G32101
XR_006251108.1 other upstream 800725 1312604 ~ 1336184 (-) True castor1
XR_006251110.1 other upstream 800727 1312606 ~ 1336184 (-) False castor1
XR_006251109.1 other upstream 800727 1312606 ~ 1336184 (-) False castor1
XR_006251111.1 other upstream 810417 1322296 ~ 1336187 (-) False castor1
XR_006250937.1 other upstream 830727 1342606 ~ 1354414 (-) False lrrc74b

Expression Profile