RNA id: XM_043239503.1


Basic Information

Item Value
RNA id XM_043239503.1
length 1657
RNA type mRNA
GC content 0.50
exon number 8
gene id ckma
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13517643 ~ 13521568 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attcagTGAGCTCTAAAATGGGCTAGCCAATGGCTGCAGGGGTTGGAGGTATATAAACCCAAATCAGACTCTTCTTGCTTGGGTGACCCCTATTTCGGCTTTGGTGAACAGGATCTGATCCCAAGGACTGTTACCACTTTTATTGTCTTGTGTGCAGTGTTAGAAACGCAACCATGCCTTTCGGAAACACCCACAACAACTTCAAGCTGAACTTCAAAGTTGAAGATGAGTATCCAGACCTTACCAAGCACAACAACCACATGGCCAAGGTGCTGACTAAGGAAATGTATGCCAAGCTTAGGGACAAGCAGACCCCCACTGGATTCACCCTGGATGATGCCATCCAGACTGGTGTTGACAACCCAGGTCACCCCTTCATCATGACTGTCGGCTGTGTTGCTGGTGATGAGGAGTCCTATGAAGTGTTTAAGGATCTCTTTGACCCTGTCATTTCCGACCGTCATGGTGGATACAAGGCAACAGACAAGCACAAGACCGACCTCAACTTCGAGAACCTGaagGGTGGAGATGACCTGGACCCCAACTATGTTCTCAGTAGCCGTGTGCGTACCGGCCGCAGCATTAGGGGATACGCCCTGCCCCCCCACAACAGCCGTGGAGAGCGCAGAGCTGTGGAGAAGCTGTCTGTTGAAGCTCTGAACAGCTTGGATGGAGAATTCAAGGGCAAATACTACCCCCTGAAATCCATGACTGATGCTGAGCAGGAGCAGCTGATCGCTGACCACTTCCTCTTTGACAAACCCGTCTCCCCCCTGCTGCTGGCTGCTGGTATGGCCCGCGACTGGCCCGATGCCAGAGGCATTTGGCACAATGAGAACAAGACCTTCCTGGTCTGGGTGAATGAGGAGGATCACCTGCGTGTCATTTCCATGCAGAAGGGTGGCAACATGAAGGAAGTGTTCAAACGCTTCTGCGTTGGTCTTCAGAAGATTGAGGATATTTTCAAGAAGCACAACCATGACTACATGTGGAACGAGCATCTTGGCTTCGTCCTGACCTGCCCCTCCAACCTGGGCACAGGCCTGCGTGGTGGTGTCCACGTCAAGCTGCCCAAGCTGAGCACACATGCCAAGTTTGAGGAGATCCTGACCAGACTGCGCCTGCAGAAGCGCGGCACAGGTGGTGTGGACACCGCTTCCGTCGGTGGAGTGTTTGACATTTCCAACGCTGATCGTATTGGCTCTTCAGAGGTTGAGCAAGTACAGTGTGTGGTTGATGGCGTCAAGCTGATGGTTGAGATGGAGAAGAAGCTGGAGAAGGGCGAGTCCATTGACAGCATGATCCCTGCCCAGAAGTAAAGCGGGAgcccttcctttttttttttctcgtcttgtctttttttttttttacagtccaTCGTGCAATCTGACATCAATGCAGAGGAAACTGCTGCTCAAAAAGACAGTCTCGCCTTTGCATCTGtcttgatttccttttttttcccttcttctttattttccatGTCACTTTGCCATCACTTTTTTCCACTTTTCTGTTCAGTTGGTAACATCTTGGGATCAGATTCCCGGCGCAGGAGTGAGCGCCTGTCGTCGAGGCTTCACCTAATTTCAGTCTTGGTTGTAAAAAGTGAATCAATCaagttgtatttaaataaaaataccccataaaacataaa

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K00933 E2.7.3.2; creatine kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU53385 lncRNA downstream 70524 13446621 ~ 13447119 (-) True G36227
TU53365 lncRNA downstream 79539 13380299 ~ 13438104 (-) True G36213
TU53391 lncRNA downstream 98681 13414876 ~ 13418962 (-) True G36229
TU53392 lncRNA downstream 103256 13412644 ~ 13414387 (-) True G36230
TU53349 lncRNA downstream 143888 13370210 ~ 13373755 (-) True G36200
TU53376 lncRNA upstream 41086 13562654 ~ 13563898 (-) True G36218
XR_006250978.1 lncRNA upstream 97458 13619026 ~ 13643314 (-) True LOC122345175
TU53448 lncRNA upstream 112102 13633670 ~ 13637323 (-) True G36279
TU53457 lncRNA upstream 120958 13642526 ~ 13643325 (-) False LOC122345175
TU53382 lncRNA upstream 186532 13708100 ~ 13711959 (-) True G36224
XM_043238693.1 mRNA downstream 105807 13409262 ~ 13411836 (-) True rhogc
XM_043239924.1 mRNA downstream 109696 13392656 ~ 13407947 (-) False taf1
XM_043239657.1 mRNA upstream 43598 13565166 ~ 13568196 (-) True kptn
XM_043240104.1 mRNA upstream 57752 13579320 ~ 13582290 (-) False h3f3c
XM_043239037.1 mRNA upstream 91093 13612661 ~ 13618357 (-) True ftr84
XM_043239038.1 mRNA upstream 125080 13646648 ~ 13653051 (-) True il13ra2
XM_043239040.1 mRNA upstream 125080 13646648 ~ 13653050 (-) False il13ra2
unassigned_transcript_955 other downstream 141943 13375629 ~ 13375700 (-) True trnap-agg_13
TU53125 other downstream 462786 13053844 ~ 13054857 (-) True G36047
TU52956 other downstream 1011685 12501914 ~ 12505958 (-) True G35936
TU52745 other downstream 1197958 12317803 ~ 12319685 (-) True G35825
TU52701 other downstream 1348316 12165410 ~ 12169327 (-) False sh2d1aa
TU53374 other upstream 57493 13579061 ~ 13582241 (-) True h3f3c
XR_006250976.1 other upstream 137509 13659077 ~ 13699226 (-) False lrch2
XR_006250977.1 other upstream 138406 13659974 ~ 13699226 (-) False lrch2
TU53475 other upstream 195556 13717124 ~ 13718543 (-) True G36298
TU53529 other upstream 296174 13817742 ~ 13818942 (-) True G36336

Expression Profile