RNA id: XM_043239504.1


Basic Information

Item Value
RNA id XM_043239504.1
length 9428
RNA type mRNA
GC content 0.47
exon number 45
gene id epg5
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15505966 ~ 15529346 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGGGACACGTGACCTGCATTGCGATAGCGTCCAGGAACAAAACAAACCCTCAAGAACTGACAGCTCTACTAAAGCTTCATGGCTGACTGACAGCTActgtttaaaagactaatataACGTAATATCTTTTAGGACTCTGTGTGGATCTAGGGAAATGGAGTAATTTTATAACAGTAATGTGGATACCTGTTTGGAAATGGAAGCTGTAAGACCAAAAAAGTCAAAGTCCAAATCCAGTGGGAAGCCACAGGTCAAAAAGGAGAGACAGGCAGAGAGTGTTAAACAGCCTACAGGACCTTCAACACCAGTTAATGAGCCAGCGCCAGCTTCTGAGTTCACTGATGTCCCCCTTAGCCTTTCTTATGTGCCTCCAGCTCCTGATCTGAAACCACCCACCATTCAGACCTCACTAGACCATAATGACAAAGCTGAAAAGGAGCAAGACCAAGTTCTCTTGTCAAATACGACTGAAATAGTGAAGAAACCATCTTGCAATGAAGAGAAAGAGCATAAAACGGCATCACAAGAAACAGCACCTCAGGTGGACCGTGCTTTTGCACCCGTTCAGTCCTTTCAAAGTGATCCCAAACCTCTTAGTGCAACACTTGAGCCATTTAGTGTCCCTTCTATATATCCATCTATCCCAGCTGCCTGCTCTGAGGCTCAGCTTTCAGAAGACTCGTATTCTATCACCTATGGACTGTTAGATGCGTCTTGTATGACAGTGGCTTCTGAGGGACAAGTAGCTCCGGCTGTTCTTCCTCTGGCTAACCAGGAATCCTCCCCACCCAGCTTGGTCCCCGTGGAGGTCGCTGACGTGGAGAGACCCAGGGAGAGGCTTTACCCAGAGCTGCCCAGGACCTGCCAGTCTGTGAAGCCTTTCACTAGCGAGCAGCTACGTACGTGGGAGCCTGGTTCTTGGTTGGAAAACGTGGAGATTCATGAAGCAGAGTTCCAGAGTCTGGCCCACCAAGAAGGACATGAGCTGTACGAGCTGCTGCTGAGCTACTGGAGGTGCCGTAAACAGCTGACACAGGCCCAGACCGAACTGCAGGCTGCTAATTCAGACTGCAAAAATGTGCAGAATCGCCTGTGGAGCTTCAAGGATGAAAGGCTTTCGTTGCAGGGTGTGTGTGCGGATCAGACCAAGGTATTTGGCTATCACTGCTACCAGCAGGTGACAATAAATGAGGCTGCATTAGCTGAGCTGAAGCATCTGTTTTCTGCGAAAGCCGAAATTCTCCATCAGACAGTGGCCCTGCACTCCTACACCTCCATCCTGTCCCGTCTACAAGTGGAGTCTTATCTCTACCGCTTGCTCAGCAGTAACCCCACCACCAAGAGTGTGGCAGTGCAAGATACAAGCACAGTTAGTCCAAAGTCTCAGCCCTCTTCTTTGCAACCACTGAAGGAAAGCATCAGTGTGCTGTTCATTTTCACCCGACGGGTCCTTGATGATTCTCAGTTTCAGGCTGACATACATCTGTGGCTTCAGATGCTGGTGTCTGTGCTTCATCAGGTTGGTTCTACAGGAGATCATCTGTTTATCCTAAATCACCTGCTCTGCTGCCCTTCAGGCGTGGGGAAATGGGCTGTGCCATTCTTACAGATCAAAGTATTGGATAACCCATCTGGAGTGTATCATTTTATGCAGGCCCTGGCTATCCTCATGTCTCCAGCGAGGCACCGTGCAGACTTCCTGGGACACATGAAGCCCAGTGACGCAAAGGGCAGCAGCAGTCTCACAGGGCCTGCATCTGGTAACTGGACTCTAGTGGATGAGGGGGGAGAGGAGGATGAAGACCCAGAAACAAGCTGGATGCTGCTGTCTGAAGATGATCTGGTTTCCCTGTTCTCTCAGTTTCCCTTTGATGAGCTCTTCAAACACTTACTGGGTATCTGCTCTAAAGGTGACTATCAGCCTCAAGCCACCACCAGTCAAAAGATGATGAAGATATTTGCATTTGCTTCTTCACTGGTCGAACTGCTTGCTGTCGGTTTGCAGACTTACAACAGAGCACGCTATCGCCAATTTGTGAAGAGAATTGGTTACATGATCAGGATGACGCTCTGTTATGTTAGTGACCACTGGGCACAGTACATCAGCCTGACAGGTGTGAGCAGGACCACCATGCAGGAACAGTCCTTTTCAATGGAGAAGCTGCAGGTGGAGTTTGACCATCTCTTCCTGAGAGCAGTTCTTCATGTGCTCAAGGCCAAGAGACTTGGCATATGGCTGTTCATGTCTGAGATGCCGTATGGCACGTTATCCAGCTCCATGTTGTGGAAGATCTTCTACATCATGCAGTGTGCAGAGATGGACGGCCTGGAGAAGCTAAGCTATAGTTTGAGTGCTGAGGACTGTATCCAGGGCCTCAGAGAACCGAGTCATCAGGAGAAGTTCCAGTGCTGGCTGTCAGAGATAAACAGCTCAGATGGAATCTGCCTGTTGACAACATTTGCACATATGGCGCAGCCCAGACGTACCGACGTAGACCCTGAATTTGTCAAGAATATAGTGCTAGAAATTTACGAGGTGTCCTATGTTAGTACCACCACCCGTGAAATCTTTTCTAAAGTTGGCCGAGAATTGTTGGCGGCTATAGCGACCGCTCACCCTCACATCATCTCTGTGCTGTTGGAGAGACTGAGAGAAACTATAGAGAAAGTGGGCATGGTGTCACTGTACCTTTTCAAGGAGTTGCCCCTGCACTTGTGGACACCAGCTCGAGCTGAGGTGGGCGTGATCCGAGATTGGCTGTTAAACTTCAGTCTCACTGCTGTGGAGAACCGGTTAGCCTGCATCATACTAGAGGGCCTCAACTGGGGATTTCAGCTTAATGGTTGCCTCATTTTACCAGCATCTTTGCATAGTGAAGTTGCACTTTTGGTGATTGAGgcatatcaaaaatatctcacAGACAAACCATATGGTGGAATCCTCTCAGAAGGCATCAAACAGGTGTCTTACCTGGCCAATGTGGTGCGGCTCGGCCAGACTCCAGAATCGTCTTTTAACCACTGGGCCTGGGATCTGGTTCTTAGGCTAAAGCTCCATGTCAATGAAATAAGTCCTCAGGATGCCTGGTGCCCTCTTCCCTCCTCCGGTGCCCCCAGTGTGCCTGAGATCACAGACTCTCCCACAATGCACCCAGTGTTCAAAGCAGTCAAAGCAGGCATACCCATCGGCTGTTTTCTGGCTATTGACATGACCACCATCGGGCACAGTTTAGAGAAGTTCTGCAGTGACGGAATATCTCTCCTGAAGACTCTGGTTCAGTCCCGTCATCTCAAAGCTGTAGTGCACATACTGGAAAACATTCTTCCTCTGGTCTACCACTGCCAGTTCTACCTGCTCAAAAATGAACAGTTTCTGAGCTGCATCCAGCTCTTCTTGCAGCTGGATAGTGGGACTCAGGGTGTGACCCAGCAGGTTACACAGAAGGTGGCCCAGCATCTGATTGGCACCTCTACATGTGAGAACATCAAACTCCTTAACAGTGTGATCCAGGCTCATACTCTGGAGAGCTCCAGGCCCGGGCGCGTTGGTGCAGTAGCTGTTCTTGAGTTCTGGCTTCAAGTTTTGACAGAACAAAACCTCTGGCATCGAGACAAAGCCGTTCTCTTCCTTCTGGACCACCTGTGCCGTGCTGCATTTCTTCACCAACAAGAGGAATGTCTCCAGAAACTTCTCTACCAACAACATAAGAGTGCTTTAGGTTACCATGGAGATAAAGGTTTGCTGTCATCTCTTATGGGCTGGATAGTGGCAGGAAACATCACTCCATCCTTCATTGAGGGCAGTTCTCTCACTGGAGAGGTGTGGTTTGCCTGGTTGGTTCTCAACATGGAGACAATATTTGAGGAAGACTCACAGCTGCGACGCTGTGTGGAGCATGAGCTCCTCTCCAACCCTGCATACACACCAGATCAGGCTCTGAAGAAAGCCCAGGTGCGCCTTAAGCTTCAGGTTGTCCCATCCCTGCAGAGACTGATGATTTATCGCTGGGCTCAGCAAGCTTTAGCTACCCCAGCAGACCATCCACTCCTGCCTTTGGTGTGGCAGAAGTTTTTTCAACTTTACCTCCGTCAACCTGGACCAGAATTTGGACTGGAGGTGAAAGGTTGTATTGGACGGCGTTACTTCCATAGTGCAGCCCATCTATCCTTGTTGAAATGCCTGAGACATCGGCTTGTTGAAGTGTGTGACTTCCACCATGCTGCTAGTAAGGCTCTGAAAGTGCCCTGCTCAAGCGGTGAATCCAGTGATGGTCTGCTGACCCCAGGGACGCCCATCACCCAGTACATGACCTCTCCTGAGCTGCACACAGAGCTTGTGCGGCTCTTCACAGTGTTTGCTTTGTGGTTGGATGATGAAAACCTTCTGAAGCAAGAAATTTACTTGCCTTCTTTGCCAAAGCAGTATGACTCTCATCGCCTAGCCAAAATCATGCAGCGCCAGCAGGAGGTGTGGATGGAGCATGTGGACATTGAGCGAGTCCAGCATGAGCTGCAGGAAGTGCTCAGTCTATGGTCAAAGGTCAAGAGTGAACCTGTGCTCTCCCAGAACACCAGCTCCTCCATCTTCACTGACTTCATCAATCCTCTGGCTGccAGGGAGCGTATTCTCACTCACCTGAGAAAGCATGATGCCCCCAAGGGGGCGCTGTTACTTGTGCCTGTGAAGGCTCCAGTGCCTGATATTCCCACTGAGAGTCTGTCTGATGAGAAAATCTCCACTGCCTTAATTCAGGAAGACCTTGCTAAGCTCCAGCATCAAGCCAAGTTTGCAACTGTCCGGGAGACACAGCATGTCGCTCTAGACAGTGAACTACTAGAGGTGTTGCCGCAGCTCTACATAAACCGAGAAGACCAGCTCTCAATGCAGTTAGAGTGCCGTGGAAAAGGTGGACAACCCTGCCAGGGTCCCGCTCATGTCACTGTAAAGTACTCAAGAATGCACAAACTGGATCCAGTGCAGAATCAGATCCAGTGCCTGAAGAGTGATATTAAACAGCTGCAGGCTGATGGAATCAAAGCTCCTCCTCAAAGTCTGGCTGAGGCGGCTGTGCACACAGAGAACTTCATCACGGCCTTGGTTAATGCCTACAAACTAAATCCATCCCCTGGCATACTGAAGGTGGGCATCGCTGCTTTCTATCAGATCGTGTCATTTGTGTGCGAGGACACACAGAGACATCCACCCACACGGCAGTTTTTCACATCCTGTATAGAGATCCTTGGTCAGGTCTTCATACGGGATGTCCGATCAGAATGTAAACAAATGCTGAAGACCATCTTGCTCAACAGACACCTCTGTAACCTTCTCTCACCCTACTTCACTCCAAACGCCTCTCCTGCAGAGCTGGTCTCTCTGTACGAGGAAGTGGTCAACACGCTCCACATAGACAGTGGCGATGTCATATTCATGCTCCTCACAAAATTTGACTTGACTCAGTGGCTGTCGGTGACGCAGCCTCAGTTTTCTGAGCGTAGCCGGTTGATGGAAATAATCCATCAGGCTCTGTGCACCTGTGGCCTAGAGCCTGAGCCTGAAGTCCTCATGCCCTTTAACATCTTCTGCAAGCATTGGACAGAACTGTTGCTTTACCAGTTTCCAGATCACTACAGTGACTTCCTTCGTCTGCTCATGCAGAGCTCTGCTGAGCAGCTTCTCAGTCCAGACTGTTGGAGAACATCACTAAGAGTGCTGGGATGTTCTCCTCATCCCAagataaagacaaacaaaatccGCTCCATCCTGCTCTCCCCTCAACAGGTGGATGAAACAATTGAATGGCTCTCAAAGTACTTTCTGAAGCTCCGTCTGTCTAACGGGGACTTCAGGAGCTTTGGTCTCCTCTCAAAATGGGGACCGTACATTGAGGAAGTCAAGTTGTTTTGGGAAGATTTGATTACCTACGTCATTGATCTGGAACTAAACAATTGCAACAAAGAACCAGTAGGAAGTGCAAGACTGGTCAAagCTCTTGAGAGCCTGCATGCAAAAATGGCCAAACTGTTTGAACCGTGGATTCTGGTCCTTGACACTGAAAACACGAGTCATCCTCGCTGTTCTCCATGGCTTGAATCTGATGCCGCAGCTGCAGCGAGCTTAGTGAGCTTATATGCACACTTGATGGAGAGCATGCATGAGAAATTCAAAGATCGCTTGTTGCCAGGACAAAGAGGAGCTCTGTGGTTTCATCTCATGCATTACTGTGAGACCTGCACCTCTCTCAAGATGCCAGAGTACCTGCTGTACACCTACCACACTGAGTACAGCCGTTTGCCATGGAAGGACCTGCATCCAGATCAGACATTAATGAACCAGTTTTTCAATGTGGAGAGGGGAAGTCCAAAGAGTTGTTTCCTGTTTATGGGAGAGCTGCTGTGTGAGGTGAACTGGGTCAGTGTACTGAGTGACTCCCTCAGCCCTCAGCTGAGCCCCTCAGCTCAGACGATGGTGGTTTCTGTCCTCTATCTGATGGTGTTTCTGGCCAAAGAGGATCTCAGCAAACCTGAGTCTTCCGTCCTCAGTCTGCTGGACCAATCAGCCTCTCTGCCTTGGCACCTAGTAGATTTTCCTTCTTATGAAAATGTCACACGCTATGTCAGCACCCATTACCCAGCATCCCTTGTTCTCAGTCATGATACTTCCTCACAACATGTCATCAAATTGCTTAGAATGGCTGCTGGATTTGGGACGACCACACAAATGTTACATCACAAGGACATGACTTTAAAGTGCCAAGCCTTCCTTCACTTAATGGTGCAGTTCCTGACTTCTCTGGATCAAAATGGAAACATAAGTCTTGCATCTCTGGAGACAGAAATGGAGAAATTACTGGAGTACATTGTCATTTTCAACCCTCCTGAGACAGACCTCCAGCAGCGGCACATGGCCACCTGCAGTCTGTTTTCGGAGATGCTGACTCTGCTGAATGAAGCTGGCATATCTACTGCAGAGGGACTCGGGACCAAACTCCACTCCTGGGTGGAAAAGCGAGCTCGGGGTCCTTTGGTTCTCCCCCTGCTAACCGCTGCGTGCAGATGCCTGGCTTCAGTGCGTCATATGACAAGAACCACTGAGGCCTGTATTCTGTCCTACTTCGCTGATGGTGGATGTGCTGACCAATACTCTGGTTGGGGGCCCATCCTTGTCTCTCTTCAGGTTCCTGAACTAACCGTTGAGGACTTCATTCAGGAAAGCCTGAATCTGGGCAGTTATCTCACGCTTTACGTCTACATCCTTCAGAGGCTGAACCTGGAGCAAACCCTCCTGAATGAGAAAAAGACCTTAATGCTGCTCAGCACATGGATCAGTCAGGTCTTCCCcagTGGTCCAGCTGATGAggcaaagctgtttttatggTGGCATAAATTCTTGGAGCTTCTGCAGATCCAGGTGGATCAAGAGGACACCTGTGCACTTGATACTTTGATTCTCACCTTAATGGCATTCCAGAACCGTGTAGCCCAGCTCAGTGAGGAAAGACTGAACTCAGGCATCCTGGGAGCCATAGGCCTTGGGAAGAAATCCCCACTTTCTAGCAGGTTTCGGGTTGTGGCACGCTGCATGTCAGCGTTTTTGTTAGTTCAGGTGCCCTCAGAGAAACAGCTGCGTCTTCATCCAGGAACAGAGCTGCAGCTCTCATCTAAAGCCCAACAGGCTTTATCTGTGCTGGAGCAAATGCTGAGTAATAAGCAGTATTCAGAGCTGCATGTGTCTGTGAACCAGGCCATTCAGTTCATCAAGTACCCAGGTCATGGCTTGCGTGACAGCAACGGTCTTTTGACCCTCCTAGTCAATGCACTTTTCACTGACTTTAATTATCTAGACATCATCCGTTAGCTATCTCCTCAAAACAAGGGTGGGCTCCTGCTGTCAAGCTCTGTGAAGCCCACCAAAAACTCCTGGAGAACAGATCTAGCTCCAGGTGAGATGAAGGTGTTTACTGTGAAATGACAGAACTCATTGTGagcaatgcattaaatcaaGTGTTTAAACACTGAGGCAGTGGTAGTTTCTTCAACTCTGCGTAAGGTTATAATTCATATCCGATTACACAAATTTTCAATAATATCACACTtgcccttcttttttttttaaagtaatcttTAAAGTAACTGAATCTTCTGTGTTTCAGACcagaaatcacacacaaacatgtccACGCAGTTCATGAACTCATTACaacattatattcatttatgtaatttattttagagtGGCGAGGATTTTATGATGTATGTATGAGGATGTTTTAGACCTCCCATGTTTTTGATGATATCTGATGATAATCCACTGAAGCTCAGTGTAGTTATACCTCatagcatgattttatttatttgcacaacGAATATTCTGGTggatttacaaaatatatatatattttttttttttcccttaacaATAGTGTGCGTTTTTTTTTGAGCTCATGCAAATAAACCAATAATGGCTGGACATCCACATTTCAATCCTaagaattgatttttatttttttattttagagatgAATATGTTTCtcactgcatttattatttgtacgGAGGCCAGCAATGTCCAAACGAGATGAACTGCTCCAGCATGTGATCTGCCTGATAAGTGCACTTAGTTTtttagtggttttatttttttaacagaagtGCTCCCTTAAAGAATGTTCACAACTGACATCACACATTCCTTtccttattttaaattgtttgttgTTTCACCGCAAGATGGATGGTATTATAtcatataggcatgtgcaaTTGAGTGAATGTGCTTGCTGCTCTATTTGCTTAGATGCATAGAGCTCATTTCAGAGCTAATATTAATTGGAGTTAAGAGAAAATCTATTTCTGTGTTGCACTATTGCCAACATGGTGTGTCTATATTTGGTTGTAGTTTTATTGACTGGAGATTATAGGTCAGCCCTTCTGGGGATTCACTGCATGCTTTTATAATACAGTCAGAGGTCATTTTCTATATTTCCTCATACCACAACATTCACTGATTTCCGTAATTGTTTCAGCATAAACATGTTCATTGAATTTGTGGTCATCATAACTCTTTAGATCTTCCCCGGGcaaacaatacaatacaatatgcTTAAACATTAACCATAATTAAAtcccaaaataaaatgaatatgataTGCATATCGACAatgatattaatgataaaaaaaagaaaaacaagcacatcgctgaattattgaaataacctgtacatttatgtaaatgtacagtGCAAAAAAgtctaatgttttatataacaCGACTTGCCTTAAGTTGTGTTTTCAATGTAATATTGTTTTCCTCTTGTGCCATAATTGCTCTTCTGTTGTCTGTTATAAAATGCAGTgtcaaaaaataatatgttgtgtacatgaaaatgtaaatgataatCAAAGTCAATAATACCCAAAATCAAAAGA

Function

GO: NA

KEGG:

id description
K23883 EPG5; ectopic P granules protein 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54241 lncRNA downstream 336608 15169047 ~ 15169358 (-) True G36811
TU54112 lncRNA downstream 600345 14905385 ~ 14905621 (-) True G36714
TU54099 lncRNA downstream 624901 14880865 ~ 14881065 (-) True G36708
TU54076 lncRNA downstream 807013 14698736 ~ 14698953 (-) True G36696
TU54002 lncRNA downstream 853573 14652095 ~ 14652393 (-) True G36631
TU54472 lncRNA upstream 32376 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 32802 15562148 ~ 15562363 (-) True G36968
TU54475 lncRNA upstream 34752 15564098 ~ 15565262 (-) True G36969
TU54502 lncRNA upstream 174406 15703752 ~ 15709388 (-) False cenpv
TU54544 lncRNA upstream 184329 15713675 ~ 15713975 (-) True G36986
XM_043240356.1 mRNA downstream 12296 15480180 ~ 15493670 (-) False dnajb5
XM_043240355.1 mRNA downstream 12372 15480180 ~ 15493594 (-) False dnajb5
XM_043240354.1 mRNA downstream 12942 15480180 ~ 15493024 (-) True dnajb5
XM_043239300.1 mRNA downstream 28893 15472092 ~ 15477073 (-) False akr1a1a
XM_043239301.1 mRNA downstream 28893 15472092 ~ 15477073 (-) True akr1a1a
XM_043238806.1 mRNA upstream 728 15530074 ~ 15534492 (-) True riok2
XM_043238805.1 mRNA upstream 5348 15534694 ~ 15554686 (-) False atxn2
XM_043238802.1 mRNA upstream 5348 15534694 ~ 15554686 (-) False atxn2
XM_043238801.1 mRNA upstream 5348 15534694 ~ 15554686 (-) False atxn2
XM_043238799.1 mRNA upstream 5348 15534694 ~ 15554686 (-) False atxn2
XR_006251075.1 other downstream 138553 15350016 ~ 15367413 (-) False npr3
XR_006250970.1 other downstream 197526 15296018 ~ 15308440 (-) False zfr
XR_006251010.1 other downstream 241021 15205951 ~ 15264945 (-) False pdzd2
TU53907 other downstream 1203585 14292063 ~ 14302381 (-) True LOC122345141
XR_006250967.1 other downstream 1449261 14045477 ~ 14056705 (-) True rnf214
TU54482 other upstream 43765 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 43912 15573258 ~ 15574817 (-) False alkbh2
TU54499 other upstream 174406 15703752 ~ 15709388 (-) True cenpv
TU54667 other upstream 195681 15725027 ~ 15727910 (-) True emc6
TU54666 other upstream 197436 15726782 ~ 15727910 (-) False emc6

Expression Profile