RNA id: XM_043239509.1


Basic Information

Item Value
RNA id XM_043239509.1
length 3102
RNA type mRNA
GC content 0.43
exon number 9
gene id marveld2b
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10053979 ~ 10058774 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATTAATTTGCCACCTCTTAAACAGCTACAGCAGGTTTTACATTAGCAGGTAAAGTAGGGAGTCAGTTTTATCCACTTTTCATTGGTTTCTATTTTTGCTTCATAACTTTAATTTTGCCGGTATGCTCTCCGTCTGTGCTCTATCAACAATCAAACTGTATCTACTTCTAAAATTCCTGAATCAATTGCaaggataaaaataaaactgagaaCGATGAGAAGAAACTTAAGATTTGTTGCCTCAGGTTGATGCTGTgcaataaaaattcaaattcaaaaaggCTGCAAAAATGTCATGCAAACAGGCTTGTCTTTTGTAATTAAGATAAAGGTGGCCACGTTAACAATATTCAGTGATTAATATTAAGAATTATAATTCTCAAATTACATTAGGCTGCTGCGTTTTGTTTAATGTGCttcattattacaattttagcAAATGCTATAATAAGCTTCATTAAATTCTTCAGAAGCAAATAACCGTTTATGTTGTGTTAATTGGTTTTGATAGgccaatgcattttttataatgaagCTTTTCTTCTAGTGTTTCATCGTTTTCCTGTCAAACTGGTTTGTGGTATGACATCACACGCTAGGGTAGGACGAGTCACGTGATCGATTCCCCTTCACCTGCAGCACCAGTGGCGGAAGACAGGTGTAAGTATCGGTGCCAGgTTGCTTTGTAAGGGGAAAAACACGGTTTTAAATTCACCTTGGGAGGCAATGTAACTACCGTTCCCAGTTCACTCAAGCTGCTAGAAGAGCCATCCCCATGTCTTTTGGAAACGGGTCAGCGTCCCACTTTGATCGGATCCGAGATATGCCTCACTATGATCAGGTGCCCATCGGCTCACTGCCGTGGGGTCAGCAGGCTCCTTACCCGCTTGGCGGTGATGTGGCAGCATCCAGCTATGATAGTCTACCACCTCCGCCTCTCCCCGAAAACCCTCCTGTTGGCCCAGATTTCTACCCGAGTGATGTTGAAGACCAGGTGGATGATGCCATGGACATCAAACCCATCCGACGCTTCATTCCTGACTCTGTGAAGAACTTCTTCAGAGCCAGTGGCAACCGAGGCAGCAAGAAATGGACCTTATCGCCACCACCGCCTGATGCGAACACCACTACCGAAGGCGTCCCATGCTCTCCTCCACACTCACGTGCACCCTCCCTACAGCCCCGCTCTTACCTAGACCCTTATGGAGGGTCCGGAGGCAGCTACAATTCAAGGAAGGAGCAGGCAATGTTATTAGGGGAGCCGCTGGAATCAGTCTCTGGGCGCTCTTTGCAGACAGCTATGACTTACAGTGAGAAGGTGGAGGAATACAATCAGCGCTATGCATATATGAAGTCCTGGGCTGGACTTTTGCGTATTTTGGGATGCGTAGAGTTGCTTTTGGGAGCTGCTGTTTTTGCATGCGTCTGTGCATATGTGCACAAAGATAATGAGTGGTTTAATATGTTTGGCTACTCCATGCATTCAGTGTATGGGGGTATGTATGGTGGAGCATCAATGGGGGGCATGTATGGAGGAAGTGGAATTTCCTACTCGGGACCCTTGACTCCTTTTGTTATTGTGGTGGCTGGAGTGGCCTGGATAGTGACTGTCATTCTAGTGGTGTTAGGCATGACCATGTATTATCGTACCATTCTACTAGACTCCAGCTGGTGGCCAATCACAGAGGGTGTGATAAATGCGACGTTAGCTTTGCTCTACTTGTCAGCCGCAATTGTATATGTGAGAGACACAGTGCGTGGGGGTCTCTGCTATTATCCACATTTCAACGCTGGGCCCAATGCAGGGTTTTGCCGAACAGAGGCAGGGCAGAATGCTGCCATCATCTTCCTTTTTCTCAACACGCTGTTGTATCTCGTGGGAGCAGGCGTGTGTCTGAAGCTGTGGAGACATGAAGCTGCAAGGATGCGCAGAGAGAGAATGGGTCAAGATAGGAAATCAGAAGGACTTCCGCTCAATATGATTGGTGCTGGCTCAAGTGTCTCCGTGCCCATCCAAACTGTTCCAGTAATGGCCAATGCAGAATCTTTTGATGGCACACCTGTTAACCCAGTTATGATGGAACCAGAGATCTTAAGAGGTCATATTCCTGCTGGCCACATCCCCAAACCTGTGGTCATTGCAGATTATGTGGCGAAATATCCCACAATCCGGACTGATGAGGAGAGGGAGCGGTACAAGGCTGTGTTTAATGATCAATATGCAGAATATAAAGAGCTCCATGCTGAGGTCCAGGTCTTAACGCAGAAGTTTGAGGAAATGGATAATCTGATGAGGAATTTACAACAGCAGCCGTCCAGTCAAATGGAGCAAGAGAGAATGAGTAGCATTATTCAAGAGTATAACAGAAAAAAGACTGATCCGACATACCAGGAGAAAAGGGAGAGATGTGAATATCTGAAGAGCAAACTTGCACACATAAAGCAGAAAATTCAGGAGTATGACAAAGTCATGGACTGGAATGATGGTTACAGCTAAACAGGACTCCATTTTACTTTCTTCATAGAGGTTCCAGGAAAAGAAGCATTCGGCCGAAAGAAAATCTTCCATGGTTATACTTTCAGGAAATAATTTTTTGGTTTGGTCTTGGTCGGTACTGAAATAATTTCCTATTGATTTCAATAGAGCAGGAATGTACAATGAAAAACACCTACCACTTCAAACCCAACACTGAAAATGATACCTTCTTTATTACTGGTATTTCAGGCACAACATCAGCAATATTTTAATCTAcgtatgatatattttttatatacacttttaattTTAGAAGTAGGTAATTTGAAGGAAATCACTCGAGTCTTTGAGCTTCCTCAAAGTTGAGATATAAACAGCTCTCGAGATGTAAATAGCTCTCAAAATcgtatttgtttaaatatcagTATCTCTATAATGATCCTAGATTTCTTAGTGCATTTATAGTTTtcctatttcattttttaatttttgtgtattttatactgtacagtcaTGTCACGTGTGAgttatatgtacattttgtatTGCCATATCCATCTAccttcaattattttttttattgacattgGAAGTAGATCAAATAAACAGGCCTGGCTCTGCATTGTA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17291 MARVELD2; MARVEL domain-containing protein 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU51347 lncRNA downstream 275741 9777633 ~ 9778238 (-) True G34877
TU51341 lncRNA downstream 287372 9766268 ~ 9766607 (-) True G34871
TU51339 lncRNA downstream 289447 9764073 ~ 9764532 (-) True G34869
TU51125 lncRNA downstream 805938 9246920 ~ 9248041 (-) True G34704
TU50983 lncRNA downstream 993165 9013306 ~ 9060814 (-) True G34594
TU51619 lncRNA upstream 222635 10281409 ~ 10296141 (-) True G35035
TU51637 lncRNA upstream 278973 10337747 ~ 10341167 (-) True G35047
TU51725 lncRNA upstream 319992 10378766 ~ 10378998 (-) True G35107
TU51762 lncRNA upstream 454156 10512930 ~ 10513285 (-) True G35139
TU51766 lncRNA upstream 457897 10516671 ~ 10517342 (-) True G35142
XM_043239511.1 mRNA downstream 1417 10046898 ~ 10052562 (-) False oclnb
XM_043239512.1 mRNA downstream 1420 10046898 ~ 10052559 (-) False oclnb
XM_043239510.1 mRNA downstream 1421 10046898 ~ 10052558 (-) True oclnb
XM_043238205.1 mRNA downstream 7205 10042534 ~ 10046774 (-) True gtf2h2
XM_043238206.1 mRNA downstream 7523 10042534 ~ 10046456 (-) False gtf2h2
XM_043239513.1 mRNA upstream 135 10058909 ~ 10060421 (-) True ak6
XM_043238175.1 mRNA upstream 15198 10073972 ~ 10079484 (-) True ankrd34bb
XM_043240290.1 mRNA upstream 21517 10080291 ~ 10083670 (-) True dhfr
XM_043240288.1 mRNA upstream 24945 10083719 ~ 10087885 (-) False si:ch211-214j8.12
XM_043240289.1 mRNA upstream 24945 10083719 ~ 10087885 (-) True si:ch211-214j8.12
TU51236 other downstream 651356 9337828 ~ 9402623 (-) True G34789
TU51091 other downstream 833472 9215508 ~ 9220507 (-) False vamp5
TU50964 other downstream 1123926 8929470 ~ 8930053 (-) True G34580
TU50888 other downstream 1376261 8674549 ~ 8677718 (-) False LOC122345093
TU50638 other downstream 1622404 8429700 ~ 8431575 (-) True timm8b
XR_006251099.1 other upstream 266341 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51745 other upstream 402434 10461208 ~ 10461709 (-) True G35122
TU52098 other upstream 809590 10868364 ~ 10874064 (-) True G35371
TU52116 other upstream 865153 10923927 ~ 10926163 (-) True G35384
TU52323 other upstream 1361181 11419955 ~ 11467122 (-) False hmgn7

Expression Profile