RNA id: XM_043239548.1


Basic Information

Item Value
RNA id XM_043239548.1
length 8521
RNA type mRNA
GC content 0.42
exon number 8
gene id arhgap35b
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13987489 ~ 14000256 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGCTGTGCTGTTGTCCATGCGCCACTGGGCGAGTCTCGGCTGTCTCAGTAACCCTCTTTTATCCTCAAAAAAGGAGAGCGAAAGAGGGCAGACTCGGAGTTGGGCTCGGGCGTAGGGACCGCCATTATCGGGAGGCTTGGACAACCACTTTCACCCTCACGCACAATGTATATATCtcgtaacatttaaaaacatgcgtGGCCCAGATTGCTCGTGATTTGGCTACGAAAAACTGGTTGTTGTGTCTCAGTGTACAGGCATCGCTGCATGCCGTCTGCACACGGTGAAATCAGCATTTTATGGCCACAACAAAGGGCATTATAAGAGATCAAAACCAACGTGCTTAGGCCGGAGGAAGAAATTAAAACAAGCCCTTTTCTGCACGGAAACGACTGGCCTCCCAAGAAAGGACATTTCTTTGTTTGGATATGTTTAGCCGTCGGTGGATTTTCGCAGCCGTTTCTATGCGAACGCGAGATCAGTAAGTTGCGCCTGACAAAAATATCCCTTGGAAACTGCAAGTCTGTCAAGCCACAATCAAACAGCCCCCGCGGAATTTAATGTCCTCGGCTTTTTACGTagtcttttgttttcctttctttctggTTTCCAACAACACTGACCGAGCCGGTTGTAAGCCCTCTTGCGCTGGCCTGGACGAGGGAAGAGGGATTGAGAAGGGAAAGGGAGAACGGAGAAAGGCACTGgTTAGCCCCATTTCTTGCTGCCTCTTCACGTCGCATCTCTGATTAATACTCTCTAATATGGACAGAACATACAAGCAGTTTTCTTGACCCGAAAAGATGATTGAAACATCAGAAATAAACCCTAAATTGTAAATCAAATACAGGACTTTCCTTCAAAATTTTATGGACACATTTTAAAGAGTCTGCCTTTGTCATCCTTTGGGGCATGGCAAGATGAACGCCTGTGTACGATGATGATGGCTAAAAAGCAAGAATCCCGAATGCCTATCTACAACCTCGTTGTTGTTGGCCTGTCGGGAACTGAGAAAGAGAAGGGGCAATGTGGAGTTGGCAAATCATGCCTTTGTAACCGCTTTGTCAGGCCCAGTGCGGATGACTTCCATCTTGATCACACTTCTGTGCTAAGTACAAGTGACTTTGGTGGCCGGGTAGTCAACAATGaccacttcctgttttgggGAGAGGTGGGGAGAGTTTTGGAAGATGGCGCAGACTGCAGAATGCATGTGGTTGAGCAGACCGAATTCATTGATGACCAAACGTTCCAGCCTCATCGCAGCACAGCATTACAGCCCTACATCAAAAGAGCTGCCTCCACCAAACTGGCTTCTGCTGAAAAGCTCATGTACTTCTGCACTGATCAGTTGGGACTGGAGCAAGACTTCGAACAGAAGCAAATGCCCGAAGGCAAGTTGCAGGTGGATGGCTTTCTGCTTTGTGTTGATGTTAGTCGTGGCATGAATCGCAACTTTGATGATCAAATGAAATTTATCACCAACTTGTACAATCACTTAAGCAAGACAAAAAAGCCTATTGTGCTGGTTCTCACTAAGTGTGATGAGGGTGTGGAGCGATACATCAAGGACTCTCATACCTTTGCCATTACAAAAAAGAACTTGCAGGTTGTTGAAACGTCGGCACGGTCCAACGTCAATGTTGATTTGGCTTTCCTTACCTTGATACAGCTTATTGATAAGGGAAGAGGTAAGCCCAAGATCATTCCTTACTTTGAGGCACTAAAGCACCAGAGTCAACTAATTGCTTCTGCAAAGGACCGCTATGAGTGGTTGGTGAACCACATTGTGAAGAATCACAATGAAACGTGGCCCAATGTTAGCCGACGAATGCAGACTTCACCCGAATACAAGGAGTATGTATTTTTAGAAGGTACTGGTAAAGCTAAAAAGCTGTTTCAACAACACATTCACAGGCTAAAACAGGAACACATTGAAAGGCGTCGCAAAGCATACCTGACCGCTCTTCCACTCGCATTAAGTAGCTTAGTGTCCGAGTTGGATGAAATTGAGCATTTGAGCTGGTCTGGAGTCCAGAAGGTCCTCGAGTCTAAAAAAGACTTTGATCATTGGTTTGTGGTACTGGACGATGCGCCTTGGGAGGACACGCCACATCTTGACAACATGGAAGATGATCGTATCCCCTTTGATGTGCTAGACACCACGGCTgctgaaataatatttgatgCACACCTTGAACATTTGCGCAATGAATGCAAGCGTGCCCAGATGCGTCATGAGTTCAAAGCGAAATTAGCATCATCACCTTTCGTTACCCCTGGCAAACCCTGGGAGGAAGCCCGAAGCTTCATCATGAACGAAGACTTTTACCAGTGGCTTGAGGAGCCAGAATATTTGGACATTTATAACCGGCACCAGAAAGCAATCATAGACAGGGCAAAGGAGGATTTTCAGGAGCTTTTACTAGAGTACTCTGAGCTCTTCTATGAACTTGAGGTAGATGCCAAACCTAGTAAAGAGAAGATGGGAGCAATTCAAGAAGTGTTGGGTGAAGAACAACGCTTCAAGGCCCTTCAGAAACTGCAAGCCGAAAGGGATGCTTTAGTGCTGAAACACATCCATTTTGTGTATCATCCTACAAAAGAAACGTGTCCAAACTGCCCACACTGTGTTGACAACAAAATTGAGCAAATACTAGCTTCGTGCTTCCCTGCACAATACCCTTCCTTTGGAAAGTCCAATATGTTTGATGGAAAGGTAGATAGAATCAATCTTGTAATACTCGGCAAAGATGGACTTGCCAGAGAATTAGCCAATGAGATTCGGGCATTGTGTACCAATGACGATCATTATATGCTTGAAGGTAGAATGTATGAGCTTATCCTTCGGCCCATTGAGGGTAATGTTAGACTTCCTGTCAATTCATTTCATACATCCACATTTACTCCCCACGGATGCCTGTGTTTGTACAATTCAAAAGAATCCTTATCATATATTGTTGAAAGTATTGAGAAGTTGCGAGAGTCCACACTTGGCAGAAGAGACAACCATATGGCTCAGCTTCCCCTGTCACTCTTACTAGTAACCAAAAGAGGCGTTGGAGGACTGGGTGACATTGGTGGTGAGACTGCTCAAGCATTAATCTCACAGGGTCAGCAGGTAGCCATAAAACTGCAGTGTAACTACCTGGAACCTGCCTCCCCAGGCACTGGCTATGGGcgaaatgtaaatgaaaagcaGATCAATCAGGTCTTGAAGGTTCTACTTGAAACAAGGAGGACTTCAACATTTCGTAGCTGTTCCCCACCTGCACCTCCGCTGCCTCCATGTATTCGAGAATTACAGCAGGATCAGAGCCCAGAGGCTGAATTGCGTATTGTCATGTGCCTAATGTGTGGAGACTCCTATGACATTGATCAACTCTTTGCACCATTTCTTCTTCCTCAGCATTGCAAGCCAACGTCTCCTCAGACAAGTGGCACTTCAGTGCTGCTAGAACAAACAATTGGTGGTCACAAGCATACAATTGAACTGTCGCTAATGTCATACCATGCTTCTTTTGCCACTCGTAAGAGTCGGCTGGTACATGGCTACATTGCTGTATACTCGGCTAGCCGCAAGGCTTCTTTTGAAACCCTGTGTGCCTTTTTGTGTGAGGTTCAGGACATTGTCCCCGTTCAACTGCTTGCAGTGGGGGAAACGCGGACTGAGCTTCTGGACTCTGAATCTGCTCATGAAATGCTAGTCCAAGGTGAAGAACTGGCACGTGAACTTGAGGGACGGTTTTGCAGTATTGTCTGTGGCACCGGAGGAGTTGTTGGAGGACTACACAAACTAGACCTTTTGGAACAATTTTTCACAGAGGTATTAGAAAAGAGAACCATTGTTGAGGCCAGTCATATGTATGAAAATGTTGCAGAAGCCAGTAGCACAAATGAGAATGTGTACTCGCCACACTGTGGCTCCCCAAGCCCTGTAACAATGCTGTTAGATTCTGAGGAAGACATGGAAGCTTCCCCGCCTTACCATGATGGCACACTCACCTCTCACGGTGGATTCAAATTGCCTGACCTGGACTCAGGTGACACATTTTCTGTGATCTCTGACCTTAGCACCTTTGAGAACAAACTGAATAATAAAGTTCCTCCACAAGTAAGACCCAAACCTAGTGTGACATTCGACCTTAGAAAACCAAATTTTAATCCGTATGTGGATGCAGTCAGCCATCGCCGTTCCCTTACATCCAATGTGACGTGGCCTCTAGGAGGAGATTATGATCCTTCAGACTATGCTGAGCCAATGGATGCGGTCTCTAAACCCCGCCCCAGCTATGAGGATAGCATATATTCTGTGCCACATGACAGCACACAGGGTAAAATTATTACCATCCGCAATTCCAATCGGATCCATTCGAATGGAGGAGGCAACGGTTCAGACAGTGAAGGCGATGGCAGCTCATTGGAGAGATGTCGCAAGTTTTCAGCTGCACGTGTAAAGCCACGTCTCTACCGTGATCGTTCCAAACGTTTGGGCAAGTTCAGCAGTTTCCGCACTAGTTTTTCCATTGGTAGCGATGATGAGATTGGCACTCTCTCAAGGTCAAAAGATGATGATGTTTCAGGACTAAAGGCAGATATACTGAATGAAGAAGGAGAAGATCCCAAAAAGAGGAACATACTGAAAAGTCTTCGCCGACCAGGCAAAAAAACAAGACCAAAGCCTCGTCATTCTATCTCTAAGCCTTTGGAGAGTAACTACTTTGGAGTGCCCTTGGTCAATGTGGTTTCCTTTGAACGACCTATTCCAGTGTTCATTGACAAGTGTATTCGTTACATTGAGGCCACAGGTCTCACAACAGAGGGTATCTACAGGGTAAGTGGGAATAAGGCGGAGATAGAGAGCATGCAGAGACAGTTCGAACAGGACCACAATCTGGACCTTGTAGAGAAGGACTTCACTGTGAATACAGTTGCCGGAGCAATGAAAAGTTTTTTCTCTGAGCTGCCTGAGCCTCTGGTTCCTTACAGTTCACAGGAGGAGCTGGTGGAAGCTTTCAAAATTAATGATCGAGAACAGAGGCTTCACACAATGAAGGATGTGTTAAGACGATTTCCCAGGGAGAATTTTGATGTCTTCAAATATGTAATGAGCCATCTAAACAAggTTAGTCAGTGGAACAGAGTCAACTTAATGACCAGCGAGAATCTCTCTATCTGTTTCTGGCCAACACTGATGAGGCCAGATTTCACCTCTATGGATGCCCTGACAGCCACACGTACCTACCAGACAATCATCGAGACATTCATCCATCAGTGTGCTTTCTTCTTTTACAACCAGCCACCTGCTGAGTCACCCACTGGCCCCTTCGGACCCCCTGGACCACTGGTGCCCTCCGGACTGCCCCCATCCCCCACAGCCGCCCCTTTATTGCCCCCAATCCCACATTTTACCCCCCTCCTGCAGTCCCCACCACATTCTCCCCCCCAGAGCCCACACACGGCCCCTGGAGAACCACAAACACTGTGAGATGGGGGAAAATCACGTGGCCTGTTATTTAGTGAACTAGacatatacacaacacacacacacacacacacacacacacacacacttgcaatgcatgcatacacatctACATACATGCTCTGCACACACATCTAAAAGCCTCTAAGACATGTAGCTTGTTTAGGTCAGTgttgtatgtttaaaaaaaaaaattgatttgagCTTGGTCCTGCTCCTGGAAATCCACCCTTCTGCAGAATTTAGTTTAAACCTGTTCTAACAAATGtctgtaatttttaatgaacatCAAACCTTAACCatctggttcaggtgtgtttgattaggtttATATCTAAACGCTTTGTCATACAGAGCATCCTTATCTACAGTTACTAacacatcacacacaaaaagacaaGCATCTGTGCGCTtatgaattctttaaaaaaactattctctttttaaacctttttaaagaGTATCACTATGTCAGCGCTGCCCTTTGTGtagattattacaaaaagagGATGGTGTTATTTTGTAGAGAGTGAATATAGATGATCTAATCAAGAAGGATACAAACTGTTTTGAAGgattttccagtttttttttaaattcagtagaaggtgtttacatttcattttacaacaGTACCTGCTCTTTTCTCTCCTGCTCTGTCTCTTTACATCTCAGTATGGATCTGTGGTATAAAGGACACTATAGTCCATGAAGCACTTACTCGTTTTTTCAGCCTTTCAGCTTAAAGACATTTTGGGAGAATAATAGAATTAACTTcacctttctctttttctctctttttctctttatttcaaGAAGATGAATGAAATCACTTTAGCAACAGCCATATTCACCACTTTGCCTGGCTGTTGTGTTCCACTCTACCGTTATTGGTTTCTACTCATGCCTATTTTGTTATACCATGGATTTTGGAGGATGTTTTTATTGCTAAGACACCTGATAGGCTGATGTTGATGAGGATTTGCTTTGCTGAGTGTCTCCTGTGGATCTTTGCTCATAAATTCACCTAATGAGAGCATACGTGCCCTTTCTTTGAAGGCTGGGATTTAAATGGCAGCGATATCATGTGGTTTTAGGGAATGCACTTCCAGTTAGTGCTGGTGTGGGGCTCAAGATCACTGAGACTGCAGATTTACTCTGACCCTTAAACATTAGACTCTGAGTCAGCAATTCAAAACCCTCATACCTTAATTTTGGactcaacatttaaaaaaaggcctTTACTGATGCCCAGTTTGACTGTTTTATGAACTCCAttgtttttacttaataatctaaagcacttttttgtctttttatatataccTGTATTGTGAACTGCAACACTGAATAATAATTGGTTCCCATTTTTTGCCATTGTGTTTAAAAGATCAATGGACCTTTTCAAGGTGAATGTAGAGTGCTCACAGATTAAGCATAATCCTGGACTCAAGTTTACTCTTGATGGTTCTACATTCATATTAGTATGTCTTTTGTCCTCTATTAGTATGTTTTTGGACCTCTTGTACAGTCCGAAGTTTGACTAACATGGACCTTAATTCACCTTTTTCCCCATTGTCATCTCCATGTGACTGGAATGGAATGACACGATTTGCCTCTTCTGCTTCTACTATGTTCTGTCTAAACTCTTCTGGACAGATCCATGATGTATAGTGATACAATGATTCATCAAATGTGTAGATTGTATGTATATTACCTTTTATTTCTCTTAAACAACAAAGCTTCTGATGTGAAGGAAATTATTCCTAAACGTATTTTGCTTGAAATGCCACTTCCTTTTTCTATCCAGCCAAGGTAGAAAAGCTGAAGTACCAAAGTAGTGCAATGTGGCTGATGAGGGTTCAACACCAGGTGTACATATTTTGTTGATGGGTTGGGGATGAGTGTGTCAGATTCAACTCAAATACTTGACAAATAGCCCATATGGCaaatctttgatgaatagacaACACTTTCTTTCATGATCCTCTTCATTTTGTGTATCTGCTGCTTTTCTACCAGGCTGAACAAAACTGAAAGAATCCCCACTTTACTTGaagtataatattttcttttcatatagAGGTTTCCAGCAAACTGCCTGAAAACTCTTGAATTAGCAACTAGTCCAGATGTTGATACAGCCATTTCTGTGTGTTATACTTGTAAGAATGCAATTTTTCTTCAAGCTAATGTGATTAGTCAAGAAAATGATGGATAACTGATGGTTATCGTGATGGTTAAAAGATTTGAGGCCCTTTAAGAGTGCCACAAAAATGTTCTGTTAAGTAGAAGTGTTTGTAGAAGTAGAACAACTTTGgaattttagttttgatttgatttcaatttTCTCCTAAAAGTCTGAGTATGAAAACTTGTTTATTCTCTGTCTGTTGTTGCATTGTGTTAAAGCCAGATAATGGAAtactggtgaaaaaaaaaaagaagaatccCTGATTAGTTGTGATGGTGCAACATTAGGAGTCATTTAAACAAtcaaaatgtgtgaaaagtgcACCTCACAACACCTGACCTGCTGAGTTCACTAATAAACTTTACCTAGAAACCGCTAAGTAAGCATTAGTCAAAATTCTGGGTTGCATGTGAAAGTTGGGAAAATTCCGGTTTGACACTTTGAAAGTATGTTTCATGGTTATTTTTTACTAAAACCTCACATGATATTTCTCACACTTTAAATACTTTTGTTGTAACGTGAATTAATCAGAATGATTGATGAAATCCTCTACAGaatcttttatataattttaagttatataaaaaataacaattataatcAGAGAAAGGTCTGACCCAAATCAGTCTTACTGTCTGAATGCAAATTAGATCAGGGGTCAGTCCGTAATAATTCAACAACACTGTAAATGAATGTTCTGCTTCCCTCTTGTGGCCATAAATTAATCAGCAggtatgtttaataaatatatgagcgcatgaaaaaaatgttttcaaaaatctgTAAACGGCTCAGTTACatgactgaaaatgtaaattaaagagaaaaactTTTCATAGATA

Function

GO: NA

KEGG:

id description
K05732 ARHGAP35, GRLF1; glucocorticoid receptor DNA-binding factor 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU53602 lncRNA downstream 10419 13975352 ~ 13977070 (-) False G36385
TU53605 lncRNA downstream 10419 13975352 ~ 13977070 (-) True G36385
TU53610 lncRNA downstream 10419 13975352 ~ 13977070 (-) False G36385
TU53531 lncRNA downstream 168155 13818248 ~ 13819334 (-) True G36337
TU53473 lncRNA downstream 274069 13712680 ~ 13713420 (-) True G36297
TU53878 lncRNA upstream 275840 14276096 ~ 14310067 (-) True G36541
TU53857 lncRNA upstream 279418 14279674 ~ 14282516 (-) True znhit1
TU53914 lncRNA upstream 310368 14310624 ~ 14310860 (-) True G36561
TU53915 lncRNA upstream 310706 14310962 ~ 14311328 (-) True G36562
TU53864 lncRNA upstream 311512 14311768 ~ 14320994 (-) True G36537
XM_043239846.1 mRNA downstream 19662 13965155 ~ 13967827 (-) True LOC122345582
XM_043240379.1 mRNA downstream 47273 13938641 ~ 13940216 (-) True chrm1b
XM_043240423.1 mRNA downstream 139419 13845403 ~ 13848070 (-) True LOC122345901
XM_043238578.1 mRNA downstream 255006 13720781 ~ 13732483 (-) True wdr44
XM_043239035.1 mRNA downstream 288274 13654294 ~ 13699215 (-) False lrch2
XM_043239554.1 mRNA upstream 303 14000559 ~ 14002075 (-) True fxyd2
XM_043239549.1 mRNA upstream 1678 14001934 ~ 14009536 (-) False tmprss13b
XM_043239552.1 mRNA upstream 1678 14001934 ~ 14009536 (-) False tmprss13b
XM_043239551.1 mRNA upstream 1678 14001934 ~ 14009536 (-) True tmprss13b
XM_043239550.1 mRNA upstream 2717 14002973 ~ 14009536 (-) False tmprss13b
TU53547 other downstream 139430 13846378 ~ 13848059 (-) False LOC122345901
unassigned_transcript_957 other downstream 142530 13844887 ~ 13844959 (-) True trnam-cau_27
unassigned_transcript_956 other downstream 148527 13838890 ~ 13838962 (-) True trnam-cau_26
TU53529 other downstream 168547 13817742 ~ 13818942 (-) True G36336
TU53475 other downstream 268946 13717124 ~ 13718543 (-) True G36298
XR_006251003.1 other upstream 1678 14001934 ~ 14009536 (-) False tmprss13b
XR_006251004.1 other upstream 2958 14003214 ~ 14009536 (-) False tmprss13b
XR_006250968.1 other upstream 45221 14045477 ~ 14056705 (-) False rnf214
XR_006250967.1 other upstream 45221 14045477 ~ 14056705 (-) True rnf214
TU53907 other upstream 291807 14292063 ~ 14302381 (-) True LOC122345141

Expression Profile