RNA id: XM_043239676.1


Basic Information

Item Value
RNA id XM_043239676.1
length 3297
RNA type mRNA
GC content 0.42
exon number 4
gene id golph3a
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15268676 ~ 15279272 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACTGCTGTTCTCGTCACGGCTGGTCGCCATATTAAACCTGACGGAATCGGCAACGCTCCGCGGTAGGGATCGCGAGGGGCCCCTCTCCAAAACAAATCCCGATTTACACTTTCATTCCCCCTAATTCACCCAGGGAATTATTTATGCATCGGACCGAATAAGTCAGTCTTTTCTCAGACGGGAGTTGTCTGGGAAGGAGGTTTAGTTTTAGTGTTGAGATGAGTACTTTGACCCAGCGAAGCTCCGGCCTGGTGCAAAGACGCACCGAGGCTTCGCGCAGCGCTGCGGCCGCAGACAGAGACCGCGGATCCGGCGACGAGGACTACGAGCCCCGGCGTGCAGACGAGCAGGACGACGATGACAGCGGCGATTCCAAGGAAACCAGACTGACCCTGATGGAAGAAGTGCTGCTGTTGGGCTTGAAAGACCGCGAGGGATACACCTCCTTCTGGAATGACTGCATTTCATCAGGCCTGCGGGGCTGCATGCTCATTGAGCTGGCCTTACGAGGGAGACTGCAGCTGGAGGCCTGTGGCATGAGGAGGAAAAGCCTGCTTGCCCGGAAGgttatttGTAAGTCTGATGCTCCGACGGGGGATGTGTTGTTGGATGAGGCTCTGAAACACATAAAAGACACTCAACCGCCCGAAACCGTGCAGAGCTGGATAGAGTTACTGAGCGGTGAGACATGGAACCCGTTGAAGCTTCACTATCAGCTGCGTAACGTCCGAGAGCGCCTGGCTAAGAACCTCGTAGAGAAGGGCGTCCTCACCACCGAGAAACAAAACTTTCTTCTGTTCGACATGACTACACACCCCCTcaccaataataatattaagcagcgcCTTATTAAGAAGGTGCAGGAGGCCGTACTGGACAAGTGGGTGAACGACCCCCACCGAATGGACAAGCGTCTTCTGGCCCTTATATTCCTCGCCCATTCCTCTGACGTACTAGAGAACGCGTTCGCCCCGCTGCTGGATGACCAGTACGATCTGGCCATGAAGAGAGTACGACAGCTGCTGGACCTGGAGCCCGAGGGCGAGAGCATGAAGAACAACACCAATGAGCTGCTGTGGGCTGTGGTGGCCGCCTTCACCAAATGAAGCGGCTTCTGTGCGATGAAATGTAAAACGGTCAGACTGGCAAAATCCGCTTTTGAGAATTGGTTGACCTGGTGTGTCAAAACGGGAGTCTCAAGTTTTCTTTCCTTGTAGATATTCCTTCCTCGCTAATCTCTCTGCAAGATCTATGATTGGGTTtctcgttgtttttttttttttttgataaggGGACCGCTTTATTTTGTCCTCGTCGAATGCAACTGGGTACCTTCCCACCGTGGACCGTTGGAACGTTTACCATTTGCATCGCCACGCgaaatggcttttttaaaattcttttctCGTCTAGACAGCTGCGTCGGGTGCCTAATAGATTTTTTGCAATTGGAGAACTAAGCAAGCCCCTTGTTATCCGTTTTGTGCGTTTAATTAAAACTGATCAATCTGCGTGTGGTACGACTCAACAGATGCTAAAGAAATAAAGTACACTGCAGtgcatcatcattattattattatttttttgccttcATGCTAATAATGAAGCctgaaaagaaaccaaaaaggATAATATCCTGGTATGATAACAGATTAGTAGTTTATGGCAAAAGGTAGTGCTAACAGTGCGTCACAttcaaacattattaaaacacaactaaatgctaaatttagGGATGAGTTCAGGCTGTTAGAGGACCTGTCCAGTATTTGCTGGATCtattatacgttttttttttttttattatcattccCTCCGATTCCCTCGATTCTTTCCGTTCTGTCCATAACACCCCACAACTTCAATTTCTACCTCTTCACACATTTATTGTGGCGATTTCTCATGAGAgttctgatttatttaaatgtactttaatgtGCCTGAGATTGGTTACAGGACGTGTAGCTCTCAAGGTGCAGTAGCTCTTCGTGACGTGGCATTAATGGAGCTAGATTCAGAAATTGGTTGTAACTCATTTCCTCAGAGGCCTCATAACCTTTGTATATGCTACCAAACACTAAATTGGAGGACCACGAGAGTTTCATTCTAAGAAGTCTGCTCTCTGAAAATAAAGATACGTATGGCGTACAGCTTCACTTTCTTTAGATATTTTTCCGCTGATATATAAAAGTACTCACGGTCAAAAGGGAAGTTTTATGGCGGAGTTTTGAATGTCATACACTTTTCACTTCATGTACTCATCAAAAAACATCATAACCTTTCAAAATTTGACTTTTATATGTAAGAACAGATTCCTCCATTTTCTCAAGTCAGTATATTTTTGAtagtatgttattataattagcTGATTGGACCTAGTATGGTAGGATGGATTGGCATTCTGTCACAATCTAGTTTAATCTGTATAGTTTATGTATTCATACTGCATACCATATGAGCAAACTCTGTATCAATCTTCATTTTGCCTGGCATGTAAAAGCTAGCTCGAGCATgtcttaattgttttttttttgtttgttttttttacactatgAAGATGTTGAAAAAGCCTTTGTTCAATGATCATATTTCAATGTttagttgtcatttttattcttttttttttatagcaataatttcaaaaatcaacatgcttttgttttgctgttcatttctttcaaaatgatGGTAAAATGCTTGCCTCACAATAGTTAATTGTATGTAGCGATGGTCTGGGAAATCCACCAATTGTTTGGAAGAGTCGACTTGAGACATGGGGAATTTTTGAAGCGTCTGAAAGTGTCTCAGagtgaaagaaaattaaaatcgTGTGTAGCTTTAGAACTCACTATAAAGGGACCCCAATGTATATACTTTCTTATTACCATGAAATAAACTATGGTCTTGAAAGTGCCTCAAACATcagctgttatttattttgtgaagaaGCAAGTGCTGCTTTTGATGCATCAGGTTTgttaaatcacttttaatacTGTTAATATAACAAATTCAGACAAATGCCATAAATGAACACATCCGTAAATACTGTAAGTTATGTTTTTGTACTAAAACGATAATTGGTCGTTttagaatgtaatgtaaatttaaatttgtttaattgcaCACTAAGTCTGAATCTTTtgcatgtgaaaaaataaatacaaccacGCATTGCTTCAATCAAATTTATACACAGCCTCCAAAACTTTCatctgtcattaaaaaaattggatCGGATTTGATTGTCTGTGTTTTAAAGTAGCAAGCATTTTGATGGGAAAGGATGGCAAAt

Function

GO: NA

KEGG:

id description
K15620 GOLPH3, GPP34; golgi phosphoprotein 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54241 lncRNA downstream 99318 15169047 ~ 15169358 (-) True G36811
TU54112 lncRNA downstream 363055 14905385 ~ 14905621 (-) True G36714
TU54099 lncRNA downstream 387611 14880865 ~ 14881065 (-) True G36708
TU54076 lncRNA downstream 569723 14698736 ~ 14698953 (-) True G36696
TU54002 lncRNA downstream 616283 14652095 ~ 14652393 (-) True G36631
TU54472 lncRNA upstream 282450 15561722 ~ 15562078 (-) True G36967
TU54473 lncRNA upstream 282876 15562148 ~ 15562363 (-) True G36968
TU54475 lncRNA upstream 284826 15564098 ~ 15565262 (-) True G36969
TU54502 lncRNA upstream 424480 15703752 ~ 15709388 (-) False cenpv
TU54544 lncRNA upstream 434403 15713675 ~ 15713975 (-) True G36986
XM_043239713.1 mRNA downstream 3731 15205951 ~ 15264945 (-) True pdzd2
XM_043239714.1 mRNA downstream 22778 15205951 ~ 15245898 (-) False pdzd2
XM_043239109.1 mRNA downstream 68839 15174388 ~ 15199837 (-) True parp8
XM_043239110.1 mRNA downstream 78031 15174388 ~ 15190645 (-) False parp8
XM_043238533.1 mRNA downstream 140504 15121996 ~ 15128172 (-) True isl1a
XM_043239960.1 mRNA upstream 942 15280214 ~ 15292882 (-) True mtmr12
XM_043238862.1 mRNA upstream 14584 15293856 ~ 15308440 (-) True zfr
XM_043240656.1 mRNA upstream 70744 15350016 ~ 15367413 (-) False npr3
XM_043240654.1 mRNA upstream 70744 15350016 ~ 15367413 (-) True npr3
XM_043238413.1 mRNA upstream 171752 15451024 ~ 15457371 (-) True eef2l2
XR_006251010.1 other downstream 3731 15205951 ~ 15264945 (-) False pdzd2
TU53907 other downstream 966295 14292063 ~ 14302381 (-) True LOC122345141
XR_006250968.1 other downstream 1211971 14045477 ~ 14056705 (-) False rnf214
XR_006250967.1 other downstream 1211971 14045477 ~ 14056705 (-) True rnf214
XR_006251003.1 other downstream 1259140 14001934 ~ 14009536 (-) False tmprss13b
XR_006250970.1 other upstream 16746 15296018 ~ 15308440 (-) False zfr
XR_006251075.1 other upstream 70744 15350016 ~ 15367413 (-) False npr3
TU54482 other upstream 293839 15573111 ~ 15574817 (-) False alkbh2
TU54484 other upstream 293986 15573258 ~ 15574817 (-) False alkbh2
TU54499 other upstream 424480 15703752 ~ 15709388 (-) True cenpv

Expression Profile