RNA id: XM_043239694.1


Basic Information

Item Value
RNA id XM_043239694.1
length 1426
RNA type mRNA
GC content 0.42
exon number 6
gene id rangrf
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24685346 ~ 24690190 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGGCGCCAGCTGATGGAGGGAAGTCAGCGCGGTTTGACTCTGTGAGTCTTTTTAAGGGTTTATGTTGAAAGTATGGATATGACCTAATGTTATTTGAGGAGCACAGCTATGTCTCGGCCTCTGTTTGGTGGTGCACTGTCAGCTGTTATTCCCCATAGTGCCCAGGATGTCAGTGAACTGAGACAGATCCCCGATAATCAAGAAGTGTTTGCTCACTCTCAGACCGATCAGAGCATTATCATCGAACTGCTGGAGTACCAAAGCCAAGTGCAAGACGCTGATGCAGCCAGGTATCATTTTGAGGATGTGGCTGCGAGTAACAAGGTGGTGGAACGTGGCTCCTGGGAGGTGAGAGGGGTGGAGCAGGTCCTCCAGTCAGAGCTATCAATGCAGGAATGCAGCTCTGCTTGGCTGCTGTCTGGAGCTCAGCTGATCTCTAAATTCAATGAGGAGGCAAAGAACACTGTGAACATTCACCTGTGCTTGTTCCGTCTGCCGCAGTATACCACTGACATTTTGCTGACATTCAATGATCCTGTGTGTATCAATCCCCTCAGCAGCAGTGCCATTGAAAATCTGGTTGCTATACCATGGACACCACAGGACTTCAAGGGTGTTCTGCAGTCATTCTGTCTACTTGACCCTGGAGTGTTTGGGTAGATGCTTAAAGCTCACgtttaaatgcagtttgtttccattaaaggaacactccacttttttggaaataggctcatttccCCCAAAGTTACTAAGTTGAGTTTTATCCATCCATTTGGCCAATCTTTgcgtctggcgatagcacttttagcatagcttagcatagatcattgaatccagttAGACCAGTAGCATGGCGTTCAACAATAACCGAAGGGTTTCGATATTGTTCCtctttaaaacttgactcttctgtagttatgtTGTGTAGTAAGACTGGCAGGAAaataaaagttgtgatttttctAAGATGATgtgactaggaactatactctcgtTCCGGCATAATAAGGAAGTTTGCTTCCATACCAtaaagagtcaagttttaaataggaaaaatatcaaaactctttagTCACTTTTGAGAGTGATGCTGCTGGTCTAATAGAATTCAATGACCTGTTCCAAGCTATGCTAAAAGATCgcctgaatggattcaaaaatggtaacgCTCAGTTTACTCTCTGGGGGAGttgaaaatgagcctatttccaacaaaagtttttttttatttcccccaGAAGCTtctacaattataaaaatacacgTTTAACAGGATAAACAGGAAAGACTGGTTAAAACCGTGCGAgtctgtataaaatatttattcttgtCAAGCAACGCTTAGCAGTTGTCTGATTCATGAGGCTGTACAAATAGAGAATCTTAATttgttgctaaaataaatacatttctattgcTTACACTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250987.1 lncRNA downstream 60468 24623559 ~ 24624878 (-) True LOC122345299
TU58207 lncRNA downstream 60494 24623853 ~ 24624852 (-) False LOC122345299
TU58194 lncRNA downstream 163325 24521562 ~ 24522021 (-) True G39298
TU58192 lncRNA downstream 164959 24519667 ~ 24520387 (-) True G39296
TU58150 lncRNA downstream 194554 24414900 ~ 24490792 (-) False G39274
TU58247 lncRNA upstream 40078 24730212 ~ 24730391 (-) True G39337
TU58251 lncRNA upstream 41505 24731639 ~ 24732075 (-) True G39341
TU58240 lncRNA upstream 56538 24746672 ~ 24748576 (-) True naa38
TU58257 lncRNA upstream 62948 24753082 ~ 24753322 (-) True G39347
TU58223 lncRNA upstream 64070 24754204 ~ 24758627 (-) True LOC122345923
XM_043238393.1 mRNA downstream 23746 24656827 ~ 24661600 (-) True bspry
XM_043239290.1 mRNA downstream 33166 24633302 ~ 24652180 (-) False traf2b
XM_043240278.1 mRNA upstream 24309 24714443 ~ 24723909 (-) True LOC122345804
XM_043240471.1 mRNA upstream 56897 24747031 ~ 24748610 (-) False naa38
XM_043240470.1 mRNA upstream 59148 24749282 ~ 24751282 (-) True sat2b
XM_043240457.1 mRNA upstream 64068 24754202 ~ 24758668 (-) False LOC122345923
XM_043240635.1 mRNA upstream 69344 24759478 ~ 24782648 (-) False taf6
XR_006250980.1 other downstream 91230 24588028 ~ 24594116 (-) False anapc2
TU57904 other downstream 484850 24197705 ~ 24200496 (-) True G39113
TU57720 other downstream 797666 23887303 ~ 23887680 (-) True G38973
TU57636 other downstream 928758 23751880 ~ 23756588 (-) True G38917
TU57575 other downstream 1080613 23602244 ~ 23604733 (-) False LOC122345364
unassigned_transcript_960 other upstream 227686 24917820 ~ 24917893 (-) True trnan-guu_1
unassigned_transcript_961 other upstream 227871 24918005 ~ 24918076 (-) True trnak-cuu_4
unassigned_transcript_962 other upstream 234014 24924148 ~ 24924220 (-) True trnak-cuu_5
unassigned_transcript_963 other upstream 236846 24926980 ~ 24927051 (-) True trnak-cuu_6
unassigned_transcript_964 other upstream 242772 24932906 ~ 24932978 (-) True trnak-cuu_7

Expression Profile