RNA id: XM_043239699.1


Basic Information

Item Value
RNA id XM_043239699.1
length 5568
RNA type mRNA
GC content 0.47
exon number 4
gene id enc1
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6232266 ~ 6243818 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCgcctctctttcttcctcctcTAAAAGCCGTTCACACCCGTCAGCTGTTCACTATCGAGACCTGCACGCGCGCGGCGGCGGAGCTGCTGGAGACGGCACGAGCGAACGCGGTTGCGCACCGTAGTCACATAGAGAGAAAGAGCGGAGCCCGAGCGGTTCCACCGACGGCACGCCGAACTGCATCCCCAGCCCGGTCGCTCACGTTGAAAGCAAGTGGAACCGAATCGCTCctcgtttgtttattttgtggttCGTCCACGCGACGTCGGACGCTGTTGCCGGTATTGTGACTCTGCACGCGTCTCGCTGTGGCATGTTTGTGGCCCAAAGCGGACGGAACTGAACTCCTCGTTGCTCCTGAACAGGATTCAATGAAAATGTCGGTCTGCGTCCACGAGAACCGCAAGTCTCGTGCCAGCACGGGCTCTATGAACATCTACCTGTTCCACAAGTCCTCGTATGCCGACAGTGTGCTAATGCACCTGAATGCTCTTCGGCAGCAGAGGCTCTTCACCGATGTTCTGCTCCACGCGGGAAACCGTTCTTTCCCGTGCCACAGGGCTGTGCTGGCCGCCTGCAGCCGCTACTTTGAAGCAATGTTCAGCGGAGGGCTGAGAGAGAGTCAGGACAGCGAAGTGGACTTCAGAGACTCCATTCATCCAGAGGTATTGGAGCTCCTTCTAGACTATGCCTATTCGTCAAGAGTGATAATAAATGAGGAGAACGCGGAATCTCTCCTTGAGGCCGGTGACATGCTGGAGTTTCAGGACATCCGCGATGCCTGTGCCGAGTTCCTGGAGAAGAACCTCCACCCATCCAACTGCCTGGGCATGCTGCTGCTCTCAGATGCTCACCAGTGCACCCAGCTGTTCCAGCTGTCCTGGAGCATGTGCCTCAGTAACTTCCCCGCTATCTGCAAGACTGAAGAGTTTCTCCAGCTGCCCAAGGACATGCTGGTCCAGCTGCTGGCGCACGAAGAGCTTGAAACCGAGGACGAGCGACTGGTCTACGAGTCGGCGCTGAACTGGGTGAACTACGACCTCGAGAGGAGACACTGTCACCTTCCGGAGCTGCTCCGTACTGTGCGTCTGGCTCTCCTTCCTGCCATCTTCCTCATGGAGAACGTCTCTACGGAGGAGCTCATCATCGCGCAGGctaaaagcaaagagctggtagACGAGGCCATCCGTTGCAAACTGCGCATCTTGCAAAACGACGGCGTCGTCAATAGTCCCTGCGCCCGGCCCCGCAAGACCAGCCACGCCCTTTTCCTGTTGGGTGGCCCCACGTTTATGTGCGACAAGCTCTACCTGGTGGACCAGAAGGCCAAAGAAATCATTCCAAAGGCAGATATCCCCAGTCCACGCAAGGAGTTCAGCGCTTGTGCCATTGGCTGCAAAGTATACGTGACTGGGGGCCGGGGCTCAGAGAACGGCGTGTCTAAGGACGTTTGGGTGTATGACACATTGCATGAAGAATGGTCCAAAGCGGCTCCGATGCTGATAGCGCGTTTCGGTCACGGTTCCGCTGAGTTACGCCACTGCCTGTACGTCGTTGGAGGTCACACAGCTGCTACTGGCTGTCTGCCTGCATCACCATCTGTGTCCTTGAAGCAGGTAGAGCAGTTTGACCCGGTTGCTAACAAGTGGAGCATGGTGGCACCCCTGCGAGAAGGAGTTAGCAATGCCGCCGTCGTCAGCGTAAAGCTGAAGTTATTCGCTTTCGGTGGGACGAGTGTGGCCCACGACAAGCTGCCTAAAGTCCAGTGCTACGATCCCTCAGAAAATCGCTGGACGGTCCCGGCGTCCTGTCCACAGCCGTGGCGCTACACCGCAGCTGCGGTTCTCGGCAACCAGATCTTTGTAATGGGAGGCGACACAGAATTCTCCGCTTGCTCTGCCTACAAATTCAGCAGTGAGACTTATCAGTGGACTAAAGTTGGAGATGTTACGGCAAAACGAATGAGCTGCCAAGCGGTGGCCTCTGGAAACAAACTTTATGTGGTGGGTGGCTACTTTGGTACACAGCGCTGCAAAACCCTGGACTGTTACGACCCCACGCTGGATGCCTGGAACAGCATCACTACCGTACCATATTCCTTAATCCCCACTGCCTTCGTCAGCACCTGGAAACACCTCCCAGCCTGAAGCACGCCTGTTCTCCCCTGTGTTACCCTACTGTTCCTACAAGAATTCTGTGTCCATTTGTCGATATCGTCTACTGGATTCCAACTGTGAAGAAACGCTATAACCTTCCTGTGCAATTTTATGAAGATACTTTCTCCAATAAGAGCTAAATATTGTGTATACAGTCCAGTcgcaaagctttttttttcttccgcaAGTTtgccaaaaattttttttcttcctccatGGAAGTTTTAAGTACGTTGTGATGTCATATCCTTAATTTTGTGGAGTATCAAAACTTGAGCTTCACGATGAAAACCAAAAGAACTGCGACGCACCATGAAGTCCAGTCTGCTTTCATCGTAACCAgcataatcatcatcatcatcttcgtCCCCCACGTTTGTGAACTCTGAACGTGTTTTTGTTCAATGCTGAATCCATGCAAGCTAAAATAGACCCGTATGCCTGTCTTAATTTGTATAATGCATGAAGGATGAGTGGAAGCTTTTGATTGGGAGAATAACAGGAGTCTCAATGCATGATCGGAGATGTTAAGATACTCCAGGAAAAGTACCTCATGTCCTGATATGTATCTACCTTTTCTTCTCCCGTGTTGATGTTAAAAAATAGACCTTGCTCAGATGAAGAAAGGCTGTTGCTGACACTTAATGGACTGATAAACCTCTAAAAAAGGACAGAAGGAAACATGAGcaagcattttaaatttttttttttttttttttaagtatttgtcCTTCACACGTCTGTACGAGGAGGACAGGTTGATGCTGAACTGTCCCTGTTGAACAGACCTTAGCAGCTTGGTGTGAAAATGGACACGGGCACAGTGTGTCCCAAGGTACACGTGCCAGCTGTGCGTTTGCGACTAAGTGAGTGCGGGAGAGGCATGTCCCAGCATGTTCGTCTGAACGAGAGTCCGTCTGACCCCACTCAACACCCATCCCCTCAAAAAATAAGCAACTGAGAAACAGCGTGAGCATGCTCTCTGAGGAAGCGCCAACAGACACTGTCATTCCCGGCTTCTGATGACTGAACGGCTAGAGTTTTGCGTTTCTCCTGCTCAAGACTTCAACCGTGCGAGACGCTTCCGTTTTGCCGATTTTTGCCTGTACTATTCTAAGCACATACAGTCACGTAAACGTGAAcgacagaaggagagagaaaagaggtgAGAGTCGTTTCGTCACCCTGCGAGGGAATGCAGTCTCTATGGCAACAACgaaactgtaaatttaaaaaaaaaaaaaaaagtgcaagaaACTGGTCGTCTGGCTTCACATATTTCAGTGTCTATTAATAGtcttaatttatgatttttgtttaaacCGTTTTTGTTTGATCCATTGTGTATTAacaatatttctcttttatttattgttaatttttctGCTTGCATACATGTTTGGATGTGTAGAAGTTGACAGGTTTTTGTACCGCGCATGGCCCAAAACGCTCTGTGTTCCTGCTGCTCTTTTGCACATTTACATAAGGTCATTTTGACTGAGCAGGTGGAATTTGTAGTGGTCAGCGAACTCTTGAGCCTCTTGCTCATCTGATCAAAAACAGGGAGGCTTGGAGGTCATAGGTCATTGACGGGATAAGAATGGGCCGAATGACGTCAGAGTTTCGCATTACCCAGGGTGGGCAGGTCAGCAGATGGGGGGGAAGTGGTTTTAAGAGTTTGGGGGATGGCTTTCTCCAAAACAGAGGGGCAGTTCCcctcaaaattgtaatttttgagtaaactatccctttaaatgttaCCCCAATAAATCAAGTTCTTTTAGGTTAAGTAATTATGTGGAGAAATTATGCTTTAACCACAGGTCAATTCAACTAGTTGTGATGGTGCTCTGACCTGCTTCAACTGTTTGTGAtcttatacattataaatttaCCTCGAACCTCCATCTAAACAGCATTACGTTTCACTTACAAGAACATTAGCGTGGTTTAGTAAGTTCTTTCGACCAATTCCGAGTGACCCCATGCCAAAACCGAGGCCGGTATTCAGCCTCTGTAACCCTCTGTAGCTGTGCATCCATCACTCTGTCAGTTCTGAAACTAAGACTGACCCAGGGTTTCTTTAGGTTTTAAGGGCCCTGTAGAGCTATCTGAGGAATGTGACGTCCGCAGCTGCTCCCAGAACAGCTGGAATCGTCACCAGCGTGTTGTAACTTACGGTTCAGTAGTGCTGTTAACATTATGATCAGATTAAGAATACGTCACAGTCACCCGGCTAGatatgcactcttaaaaatacagcttctacaaatcattttaaactctGACAATGGCACAAATGGATTCAGAGCTTTTATTACGCGTTCATTATGCATGTTCGTATGAAGAACTTTAATAGTAACCCTAGTTGTCAATgaagaatctttatttttaagagtgcgtGCTAGTTGGTAAAGCCTGTCACCCAAAGTGATTTCACTGGGCAAATGTAATGATGATGACTAAAACGGTGTTTGTTATGATAAAGCTGAATCCCAAAGGTCTTGAAATAACTAACAGCGATGTCTGCATAAGGGCAAGACCATAGTGCTTTCATGTCAATGCCAAATGTACTGCCTGTAGAGATGATGTGTCTGTATGAATATTCACTGCGGAGTGACACAGCGACAACAGTGTTTGGGGTAGGTTGAATAACACCACTGGCAGTTTGCGACGCTATAGCTATCGTGACAACACTGTTCTACATGCTACAAGCTGATTATATAGCTTTAAATTTAATAGAAGATAGTATtccgtgtgttttttttgttttgtttttttcaactgCACAGCGACTGCAAAGTTGAAGGAAAGCCCTAAGAGAGGAAAACCGGTAGCAAGCGTTCCTCCCACAATCCCTCTCATCCCCTCCAGGACAttcttgctttaaaatgttccGATTAGCCTTTAGGGTCTTACGCCCCCTCCTTTTCCCCCCTTCCAGAATACCTTTTCACAGAACACTGCACACTCTGACCTCCAGCCAATCAAAAACCCTGTTCTGCCCCCCTCCGCATAGCACAGTTGCCACAGCGATGGTCAACAATCATTGCTCCCCTCTCCATTTGAACTAGTAATAgtcaagtgttttgtttttccctctTACTCCTTCCCTCTCTCCTCCTGCTGAAGTGAAAGATTGATTCAGAGGTGACTCATAAGCCCGTGTGCATTTAGAACTCTTAAACGCTGTATGCCTTCACAAACAGACGCATTGCTAAAGCACTGTCAATGTTGGGCTGTACTGTTGTTTTCGTGggtgtcatttttcttttcatttctatatttgtcgtattatataattgtattgttattttatctCAACCGCTGCGGTTAACATTATTTTGTACAAGTGATTTTTTCACAATGTGAAATTCATGGCTAAATAAAGAtaagagtttttcctcttga

Function

GO: NA

KEGG:

id description
K10462 KLHL25_37, ENC1, ENC2; kelch-like protein 25/37 (ectoderm-neural cortex protein)

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49541 lncRNA downstream 53595 6178172 ~ 6178671 (-) True G33615
TU49538 lncRNA downstream 58153 6173847 ~ 6174113 (-) True G33612
TU49536 lncRNA downstream 59854 6172144 ~ 6172412 (-) True G33610
TU49440 lncRNA downstream 249463 5969242 ~ 5982803 (-) False G33549
TU49443 lncRNA downstream 249463 5970748 ~ 5982803 (-) False G33549
TU49626 lncRNA upstream 365631 6609449 ~ 6611442 (-) False G33681
TU49627 lncRNA upstream 365631 6609449 ~ 6611492 (-) True G33681
TU49624 lncRNA upstream 365663 6609481 ~ 6611442 (-) False G33681
TU49629 lncRNA upstream 367922 6611740 ~ 6613055 (-) True G33683
TU49721 lncRNA upstream 515091 6758909 ~ 6796851 (-) True G33738
XM_043239784.1 mRNA downstream 132565 6096157 ~ 6099701 (-) False ankra2
XM_043239783.1 mRNA downstream 132600 6096157 ~ 6099666 (-) True ankra2
XM_043238540.1 mRNA downstream 142710 6086801 ~ 6089556 (-) True foxd1
XM_043238326.1 mRNA downstream 322275 5898895 ~ 5909991 (-) True slc6a4b
XM_043240904.1 mRNA downstream 348102 5859279 ~ 5884164 (-) True git2a
XM_043239279.1 mRNA upstream 11600 6255418 ~ 6263302 (-) True gfm2
XM_043238967.1 mRNA upstream 21919 6265737 ~ 6281395 (-) True aif1l
XM_043238966.1 mRNA upstream 38956 6282774 ~ 6343615 (-) True lamc3
XM_043238323.1 mRNA upstream 519318 6763136 ~ 6792026 (-) False ttll11
XM_043238322.1 mRNA upstream 519318 6763136 ~ 6792024 (-) True ttll11
unassigned_transcript_954 other downstream 275895 5956299 ~ 5956371 (-) True trnak-uuu_104
XR_006251120.1 other downstream 800872 5431264 ~ 5431394 (-) True LOC122346225
TU48850 other downstream 1609208 4622490 ~ 4623058 (-) True G33175
TU48822 other downstream 2039185 4144927 ~ 4193081 (-) False LOC122346168
TU49743 other upstream 580353 6824171 ~ 6826182 (-) True G33758
XR_006251011.1 other upstream 679612 6923430 ~ 6943192 (-) True usp20
XR_006251012.1 other upstream 687054 6930872 ~ 6943203 (-) False usp20
XR_006251117.1 other upstream 877904 7121722 ~ 7121849 (-) True LOC122346221
XR_006251118.1 other upstream 878521 7122339 ~ 7122464 (-) True LOC122346223

Expression Profile