RNA id: XM_043239754.1


Basic Information

Item Value
RNA id XM_043239754.1
length 1402
RNA type mRNA
GC content 0.53
exon number 10
gene id mvb12ba
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31943855 ~ 31960848 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACCCCTACCTCCTTCTCAGTTTCAGTGACTGGTTAGTAATGGCAGCTACTGAGGACCCCTAAAACACTCTGGCAAATTAAGGAGAAATGCGTCGTTTAAAATGGATTAAGTAATTAACGGGAATGTCAACGGTCCGGTGTTGAGGTGTAACGACAGTCAGAAGAGGATCCAGCGGCGTTTATCTTTTCAAACCGCAGCGTCTGTCAGTCTATCTGCGCGAAGTGTATTTGTTGGGGTAAGAGAGACGTCGATTAGCATTAGAGCTGTTAGCTTCGCTGCCGCTTTCGCCTGCCGCTGCTCCTCTCGCAGCCCGAGCTTTCGCGCTCCCCCCGCCGCATTCCCTCCCGCTCCGCCCCGCCCCGCTCTGACGCGCTGCCGAGGCTTCTGCGGCCTGCTGCTACCGCTGTGTGCCGCGGGTCATGAAAAGCTGCTTTTGTCCGAAAAGGAAGGACGCTGTGCATTTTACAAATTCCTCTATGATGCCTGAAGTGCGGGACCTTTCAGACGCCTTGCCGGAGATGCCCATGGACCCGATCACTGGCGTAGGGGTTGTAGCCTCGAGGAACAGAGCTCCCACCGGCTATGATGTGGTTGCACAAACCACAGATGGGATTGATGCAGACTTGTGGAAAGATGGCTTGTTCAAATCCAAGGTGACCCGCTATCTGTGCTTCACCAGGGCTTTCTCCAAAGAGAACAGTCATTTAGGAAATGTGCTTGTAGACATGAAGCTCATCGACATCAAGGACACGCTGCCTGTGGGATTCATTCCCATTCAGGAAACCGTGGACACACagGAGCCGGCGTTCAGGAAGAGGAGGTTATGTATTAAGTTCATCCCGAGAGACTCCACTGAAGCTGCCATCTGCGATATCCGCATCTTAGGACGCTCTAAACAGGCTCCCCCACAGTATACATTCATAGGAGAGTTGAACAATATGGGGATCTGGTACCGTATGGGAAAGGTGCCGCGGGCCCAGGACTCTTCCCCTGTACAAAACAACTCCACCACCAACAACACCAATAACATCCAGACTGTCACCAACAACTCCACTCCAGCGCCAGTCTTGCCCAAGCACATATCCATGACCCTGCCGGcatgtttcagaaaaagcaCAACTAGACCAGACTTTGAACATCAGAACTCCAACCTCTATGCCATCTCTGCTATGGATGGAGTGCCTTTCATGATTTCGGAGAAGTTTGCATGCGCCTCCAGTGATCTGCAGCAGGTGGATCTAATGGGCATCAGAATCAAATCACTTGCAGAAATTGAGAAGGAGtATGAATATAGTTTCCGGACGGAGCACAGCGCCGCGGCCCGTCTGCCGCCCAGCCCCACCAGAACATCTCTGGGCTCCGAGGCCTAACACGAAGACCTGATCCGAGCAGAGACTCTGTA

Function

GO: NA

KEGG:

id description
K12186 FAM125; ESCRT-I complex subunit MVB12

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60785 lncRNA downstream 39068 31723742 ~ 31904787 (-) True G41047
TU60793 lncRNA downstream 145587 31797709 ~ 31798268 (-) True G41051
TU60772 lncRNA downstream 211596 31712351 ~ 31732259 (-) True G41037
TU60771 lncRNA downstream 211596 31730532 ~ 31732259 (-) False G41037
TU60730 lncRNA downstream 248067 31691866 ~ 31695788 (-) False G41018
TU60811 lncRNA upstream 15088 31975936 ~ 31977051 (-) True G41064
TU60812 lncRNA upstream 16866 31977714 ~ 31978466 (-) True G41065
TU60963 lncRNA upstream 425279 32386127 ~ 32386472 (-) True G41177
TU60989 lncRNA upstream 477771 32438619 ~ 32439145 (-) True G41198
TU60982 lncRNA upstream 483434 32444282 ~ 32445281 (-) True G41191
XM_043239757.1 mRNA downstream 9382 31895803 ~ 31934473 (-) True lmx1ba
XM_043238392.1 mRNA downstream 78965 31859896 ~ 31864890 (-) True zbtb43
XM_043239997.1 mRNA downstream 86253 31759936 ~ 31857602 (-) True LOC122345662
XM_043238572.1 mRNA downstream 207904 31733458 ~ 31735951 (-) True zgc:153704
XM_043239558.1 mRNA downstream 232118 31702453 ~ 31711737 (-) False apooa
XM_043238302.1 mRNA upstream 19039 31979887 ~ 32016468 (-) True pbx3a
XM_043238304.1 mRNA upstream 19039 31979887 ~ 32016465 (-) False pbx3a
XM_043238182.1 mRNA upstream 88804 32049652 ~ 32067214 (-) False ajm1
XM_043238183.1 mRNA upstream 88804 32049652 ~ 32067214 (-) True ajm1
XM_043238184.1 mRNA upstream 88804 32049652 ~ 32063072 (-) False ajm1
TU60769 other downstream 220949 31721270 ~ 31722906 (-) True G41035
XR_006251005.1 other downstream 232118 31702453 ~ 31711737 (-) True apooa
TU60335 other downstream 1117497 30819515 ~ 30826358 (-) True G40752
TU60340 other downstream 1117497 30819515 ~ 30826358 (-) False G40752
TU60266 other downstream 1151136 30789633 ~ 30792719 (-) True G40713
XR_006251008.1 other upstream 161436 32122284 ~ 32173823 (-) False tnca
XR_006251085.1 other upstream 253428 32214276 ~ 32293782 (-) False LOC122346090
XR_006251086.1 other upstream 253444 32214292 ~ 32293782 (-) False LOC122346090
XR_006251087.1 other upstream 253445 32214293 ~ 32293782 (-) True LOC122346090
XR_006251089.1 other upstream 253447 32214295 ~ 32293782 (-) False LOC122346090

Expression Profile