RNA id: XM_043239866.1


Basic Information

Item Value
RNA id XM_043239866.1
length 4651
RNA type mRNA
GC content 0.45
exon number 11
gene id slc25a25b
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7624124 ~ 7640250 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTGAACACGAGATTCCTCCCGCCCTACCGGCATTCTCGTTGCATCAGCTGTCAGCGGCATTCAGACCGCCAATTCAAACCGGATTACCACTGGAAATTCACAAACtcaaggatatatatatatacggagCGAGATTGGAAACGATGTATGTGTCGGAGGACGCCGCTTTGCCTGCGTTTTTTGAAATACTAGAAACCGGAGCGCCGGTGGGACATCCTTCCACCTCATCACTATGAGCTCTGAACGCCGCTGTGGCGAGTGAATTCACCGCGCGATCGGTTTTGAACCTTATCCCAGAACATATCACACGGACTGCTGAAAGAATTAAACAATAAGTAACTTCGGAAGCTTTCTCAATGCGCATCTGTCACGCATCTTGACTGGAAAACAGGCGCCGCTCCCCACGCGCTCGCCTCGCGCGCAGACGGACTTTAACGGTACTTTATATCGCCGGAGTTTAGTGGCATGCATCAGCGCGGATCGCTGGTCTCTCCGCTGCTCAGTGGTGTTTTCTGCCAGTGCCGCTCGGAGGAGTATCAGGGCTCGGACCCCGGTGGGGGACGCGGTGGTGGTGGCCGGACTCTGGGCTCCGCGACGTCTCTGTCTGATCACCGCCATGATGACTCCTGCGACTCCCCGCATCACTGCCCGGTGTGCGGCGGACCCGAGCAGGAGCATCGGCTGAAGCTGCTCTTCCAGATCCTGGATGTCAACGGGGATGGAGGCATCTGTGTCAACGACCTGACCATCGGATTGAAAAAGCTGGGGGTCCATCGCACCGAACATGAACTCAAGAAAATCGTCAAGGCTGGAGACAAAGACTTGGACGGTCAGCTGGACTTTGAAGAGTTTGTGCACTACCTGAGGGACCATGAGAAGAAACTGAGGCTGGTCTTCAAGAGTCTTGATAAAAAGAACGATGgtCGCATAGATTCGCAGGAGATCATGCAGTCACTAAGAGACCTCGGGGTTCACATATCTGAGGAGCAGGCTGAAAAGATCCTCAAGAGAATAAGGAGGGGTCATATATGTGCCCCTATAATGTATATGGATAAAAACGGTACGATGACGATTGATTGGAATGAATGGAGAGATTACCATCTGCTTCATCCCGCCGACAACATTCCCGAAATCATTCTCTACTGGAAGCACTCTACGATATTTGACGTAGGGGAAAGCATGTTGGTCCCTGATGAGTTCACAGCAGAGGAGAAGAAAACAGGAATGTGGTGGCGACATCTTGTAGCAGGAGGTGGAGCTGGCGCTGTGTCCCGTACCTGTACAGCACCCCTGGACCGCCTTAAGGTTCTCATGCAGGTTCACGCGTCACGCAGCAACACCATGGGCATCGCTGGAGGATTCGTCCAAATGATCCGCGAAGGTGGACTCCGCTCGCTGTGGAGAGGGAACGGTATCAATGTTTTGAAGATCGCACCTGAGTCCGCTATCAAGTTCATGGCCTATGAGCAGATTAAGCGGCTGATTGGCAGCAATCAGGAGACGCTGGGGATCCTGGAGAGGCTGGTTGCTGGGTCTCTAGCAGGAGCTTTTGCTCAGAGCAGCATCTACCCCATGGAGgtCTTAAAAACTCGCCTTGCCCTGGGAAGGACGGGTCAGTACTCTGGTATCATGGACTGcgctaaatatatatttaagaaggAGGGACTGACAGCCTTCTACAAAGGTTATATTCCCAATATGTTGGGAATCATTCCGTATGCCGGAATAGACCTGGCTGTTTATGAGACATTAAAAAACTCGTGGCTGCAGAGGTTTGCTACGGACAGTGCTGATCCAGGTGTCTTTGTGCTGCTAGCCTGTGGTACGATGTCTAGTACCTGTGGACAGTTAGCAAGCTACCCGTTAGCCTTAGTGAGGACACGAATGCAGGCTCAAGCTACTCAGGAAGGCAGCCCACAGATGACCATGACTGGTCTCTTCAGACACATTGTACGAACAGAGGGCGCTATTGGACTCTATAGAGGCTTGGCACCCAACTTTATGAAGGTCATTCCTGCTGTTAGCATCAGTTATGTGGTGTATGAGAACCTAAAGATCACCCTTGGCGTCCAGTCCCGGTGAGGGGGAACCCAAAGACTGTTAAAATCCTTAATggcttttgtttttcctctcaacttttcttttgaactaCTGAAAGAGATCGCCCAGGATGGCCAGGTTGCACTCGGAGAGAAGCGTATCAACAGTCGGCAAAGAGAGAGCTTGCATGAAGGGGGAAGACGAAAGGTTTAACTTTATTCGATGAAGGGAAGCGTAACTGGAATATATGAGCCCAGGGACATGCGTAGAAATACCTCTCTGCATTAAATATACAATCCTAGCTTTAAGTAAACCGCGATCGTCTCGTCTGTATTGGATCCAGACACTCCGGAGGTCGCAGGGTTGCGTTCGCTATATTTCAGTAGGGACCAATTACATGCAAGACGTTTCGGAAAAACTACTTTATGGAAAGGAAGGGCCAAACACCTGACGGCTAGATTTACTAAAGCTTTTGGTATAAGCAAATTTCCTTTAAGAAAATAGCACTGCATCCATTAATTAACTCGTTTAAACTGCACAGCTGGAATTGAATGGCTAAAGGCTTTAGTAGATGTTATGCTAATAATCTTGGTGTAGTCCCTTCAGATCGCTGATTCGTCAATCCACTGGATGGCAGtgttcgttaaaaaaaaaagaaagaaatagaaacaGGGCCAGGCATAAATTTGTTACAAGATCACCCACATACTTGCTTTTCACTGGCATCATTTCCTGCTTGTATTATTCTAGGATACACTCCTTTGTATTATTACGTTAATCGACATGCCAGTTTTCGcttctttaaagggatagtgtgTAACAAGGGAAATATACGTCTTATTCATCAAATTGTCCCAATATTGTTGAGGACTTTtcaatgttaatttattataatttttttatgttgtatatttatttcatttcaatttgaaGGTTACTATAACAAGAagactttattaaattaaaaactatatgtGCACACACTCCCAGTGGTGACCGGCAGCTAATCGCTTTTAAGACTTTGGctcagttttaaatgtaattggtTGAGTTCTGTGTCTAGATGGACACTGCCAGGTCTTAGGTTGAAGAAAACAATGCTACACATTGATTCGTTTTTACATTCAAACAGTTATAGTTCATAAATTGGTAATATACGCGCAGTGTAAATACAGTTTCTCACCAGTATTAGTTTGCAAGGATTTCAAGCATAACTATAACACTCATTTAAACTCACTCTAGTCGATAtttaagcactttattttaataaaaataaaccagacTTGAATTTTTAGGAGGATTTACAATGGGATGCTAGCGTTCGGTAATTGTAGTGGTCGTGATTTaagcaaatattatttttctgcatttatgaTTAATGTTTGTGGCAGGTCGGGGGCATGAGGTTTTTGTAAAGGAAACACTAAAAAGGTACAATATAGCTTCAAAAATGATTTGACTCTACTTTGCAGCAGTAGGCAAGTATCCTGTATATTTGCATACGACATATTTCTGGATCGGCATCCCGATGTGCATTTTGACGGACAAGGAATAAATAAACTGCCCTTACAGCTATTGCATGTGAAGTGAAAACCCACCAGTTCAATGGGTTGCTGCCCTTTGTAATTCTACGAGACCATAGTGCTAATAGAGTTGccttatttatgaatataaaaagctGCTTTTAGACTATTTGGGGGAAGTGagactgaaatatttttctagTGTTTTGATTCTCAGGGAGGTCTCGGATACTCCTGTGCAGACGAGACCTCTGAGACTTTTCTCCGTTGAGATCTGGAACGGATATCTGCATTTTTGTAACTTGTATGGAGAGTCTGTGCAGGCCCGGGATCAGTTGGCCTTTCTCAAGCCTCCTAAAAGTGACTTGGATCAGTGAAAACGGCAAATACCCTTCTGTGTCCCGATGGTGGTTCAACTAAACTCAGCTGTGACCCGATTCTCTTTGAATCAATCCAGTCTTTGTAAcgcatgtatgtgtgtcttGTCTGAGTATGCACAAAAATTGCACTGTAGAGTCTTTACAGGGCTTTAAAAGCTGCCTGTCTCGTAACGGATGCagctttttttggtttgtttggttttgcattttgcaccttttttttcccctgtttcTCACAGGAGAAATCTTTGGACTCCTCTGGACTTGTGAGCTCGACCCATTAGAGTGGTTGTCCTGAGACTAAAGGCTTTAgattgtgtgtgcgtgtttgtggcGTTCAACACAATCGAGGAATGCCGCCCTTCGAGACTTCATGTAATCTATCGCCTTACCGTTCAGCTGTTTGGTAGTGAGTGTAACTGCGCCACGTTCACCACACGTATATCAGTATGTGCTGTTGCTGGGGTACCGCGAATATCGTAAACATACACACTAATGAAATATCCAAACACGTGTACTGCAAAACATATCTAGATGTGAAGACACATCTGTGAAGGTTTAGTTGAGATGCGCAAATCAATGTTTACGggacaaaaactgaaataaaaatcgaCTTCCTCTAGAATGCAGAAACTGAATGTAGAGCagaaatatttatgtttgtaaaataactgttaaataaagttattcTTCATTATGTTCATGGAA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU50121 lncRNA downstream 45912 7572160 ~ 7578212 (-) True G34025
XR_006251016.1 lncRNA downstream 125336 7495614 ~ 7498788 (-) True LOC122345617
XR_006251018.1 lncRNA downstream 164013 7450377 ~ 7460111 (-) False LOC122345654
XR_006251019.1 lncRNA downstream 164013 7450377 ~ 7460111 (-) True LOC122345654
TU50073 lncRNA downstream 228892 7366250 ~ 7395232 (-) True G33990
TU50415 lncRNA upstream 2720 7642970 ~ 7644229 (-) True G34214
TU50458 lncRNA upstream 69655 7709905 ~ 7710223 (-) False LOC122345606
TU50461 lncRNA upstream 71793 7712043 ~ 7712494 (-) True G34248
TU50441 lncRNA upstream 77323 7717573 ~ 7760165 (-) True G34231
TU50476 lncRNA upstream 221225 7861475 ~ 7861829 (-) True G34260
XM_043239871.1 mRNA downstream 652 7619097 ~ 7623472 (-) True uap1l1
XM_043239894.1 mRNA downstream 5160 7613889 ~ 7618964 (-) False zdhhc12b
XM_043239895.1 mRNA downstream 5623 7613889 ~ 7618501 (-) True zdhhc12b
XM_043239907.1 mRNA downstream 25229 7596285 ~ 7598895 (-) True iscub
XM_043239898.1 mRNA downstream 63013 7558279 ~ 7561111 (-) True ungb
XM_043239899.1 mRNA upstream 66720 7706970 ~ 7711824 (-) True LOC122345606
XM_043239903.1 mRNA upstream 78315 7718565 ~ 7721758 (-) True si:dkey-220k22.3
XM_043239862.1 mRNA upstream 85711 7725961 ~ 7780945 (-) True si:dkey-220k22.1
XM_043239910.1 mRNA upstream 154500 7794750 ~ 7829765 (-) True camkk1a
XM_043238852.1 mRNA upstream 224887 7865137 ~ 7911974 (-) True atp2a3
TU50081 other downstream 226971 7382346 ~ 7397153 (-) True G33998
XR_006251118.1 other downstream 501660 7122339 ~ 7122464 (-) True LOC122346223
XR_006251117.1 other downstream 502275 7121722 ~ 7121849 (-) True LOC122346221
XR_006251012.1 other downstream 680921 6930872 ~ 6943203 (-) False usp20
XR_006251011.1 other downstream 680932 6923430 ~ 6943192 (-) True usp20
TU50440 other upstream 79446 7719696 ~ 7721463 (-) False si:dkey-220k22.3
TU50633 other upstream 771632 8411882 ~ 8414806 (-) True G34372
TU50638 other upstream 789450 8429700 ~ 8431575 (-) True timm8b
TU50888 other upstream 1034299 8674549 ~ 8677718 (-) False LOC122345093
TU50964 other upstream 1289220 8929470 ~ 8930053 (-) True G34580

Expression Profile