RNA id: XM_043239956.1


Basic Information

Item Value
RNA id XM_043239956.1
length 2436
RNA type mRNA
GC content 0.49
exon number 18
gene id slc37a2
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23086295 ~ 23097259 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

agtgtgtgagtgtgtgtgtgtgagagagagagagagagagagagagagtgtgtgtgagtgtgtgcctCAGCCCCGTGTGGAAAATGGAGACGCTAGTAGAAAAGATCAATTGGCTAACACTCATGTGATTTTTAAAGCCCAGACGAGCCGGTATTAATAGCGTCCAGGTTGAAACGCAGACGGACACGGGCCGAGGCAACCATGGAAATCTCCGGGAATTTAGAGCGCTCTACGGTTTTTCCACCTCTGGAATTGGAAAATGACAACACGTCTCCGATACTTTAAATGCAACCTTTCCTCTGGTTTAGGATCACCGGCTTTCGGCGAACATGATTTTATGGACTCGTAGTTTTAGGTCGCGAGAAATGAGCGCAAACTGATCTGAGACACAAAACGATTAGTCAGCTAGTTTCGGTGTGTATTTTACTTGTTCTTGAAGTTTTAGTGGATATGGGCTTTTTTAGACCTCATTTATAACGTAACGTTAGATACGATTTTTTTAGTATAgcgtttatttgttttctggttttgtttgggGGTTCTTTTAACGACACGAACCGCGCTAAGTGTAACAATGAGATCTCTGGCCCCGGGAGTCAAACTCATCACCTCTTTCTCCAGAGACAGCTGGTACCGgttcttcatcctcctcctgaCGTTCGTCTTCTACACCACCTACCACCTCTCTCGGAAGCCTATCAGTATTGTCAAGAGTCAGCTGCACAGAAACTGCTCTAACGTTATTCATCCGGCAGACCTCAACATCACTGACAATGACACCTGGTGTGATTGGGTTCCTTTTGaccagAACAATTACCAGAGCCTGTTTGGAGTCTTGGATAACTGTTTCCTTGTTGCGTATGCTATCGGCATGTTCTTCAGTGGGATTTTTGGAGAGCGTTTGCCCTTGCGGTACTACCTGAGCTCAGGGATGATTCTCAGCGGCATTTTCACTGCTCTCTTCGGCCTGGGCTTTTACTGGCAAATCCACTCTTTGTGGTATTACTGCTTAGTTCAGGCCTTAAATGGGCTGGTGCAGACTACAGGCTGGCCGGCCGTGGTGGCTTGTGTTGGGAACTGGTTTGGGAAGGGAAAGCGTGGGTTCATCATGGGTATCTGGAATTCTCACACCTCAGTAGGAAACATTCTGGGCTCCCTCATTGCTGGGGTCTATGTGTCATCTGCATGGGGCCTGTCGTTCATTGTGCCTGGTATCATCATCGCTGTTGCTGGAGTCATCTGCTTTTTGTTCCTGGTCGAAAaaccTGAAGATGTGAACTGTACTCCTCCACAACACCATGAGAGTGCGGAGCAGGAGCCTCTGCTGAGGAACTCTTCCAGTAATGAGGAGATCTTCAGCACTAACACCTCCACAGCCGTGGAGACGGTGGAGGATCACACAGAAGCCATCAGCTTCTGCGGAGCGCTCAGGATTCCTGGTGTGGTGGAGTTCTCCTTATGTTTGCTTTTCGCCAAGCTGGTCAGCTACACCTTCCTCTACTGGCTTCCTTTATACATCGCTAATGTTGCTCATTTTGATCCTAAAGAAGCCGGGGACCTCTCTACGCTTTTTGATGTCGGAGGAATTGTGGGTGGCATCGTGGCTGGATTAATATCTGACTACAGCGGAGGCAGAGCCACGACCTGCTGCGCCATGTTGATAATTGCTGCTCCAATGCTGTTCCTGTACAACAAGATCGGGCAGAACGGCTTACCAACCACCATTGGCATGTTGCTGTGGTGCGGCGCTCTCGTGAATGGACCCTACGCCCTCATCACCACTGCCGTGTCAGCTGACCTAGGAACCCACGAGTGTCTGAGAGGGAACTCCAGAGCACTGTCCACTGTGACCGCCATTATTGACGGCACTGGATCAATAGGTGCCGCTGTTGGGCCTCTGTTGGCTGGCCTGATCTCTCCCACTGGATGgaataatgttttctatatgCTCATTGCTGCTGACGTGCTGGCCTGTCTGCTGTTGTCCAGGCTGGTGTATAAGGAGGTCAGAGGATGGTGCGGATACACTACAAGGATGAGAGGGTTCAAAGAGATCTGAGCCGCCCGTCGAACAAGAGAATATCACACCTGTGACGGAAAATTACCTGCAGCATAACGACAAAAAGGGACCATGGACTGATGCAACACACCAAGTCTTTTTATGCCCAAgggttattttatatgaaaattgTAACATGAGACTTTCATCCTTTTATACTGACAATGGAACAAAGCTCAGCTGCTgcggtgaaggaggaggagagtcacacacacacacacacacacacacacacactcgtccaCACGTGGCCCGAGCGGGACAAACACAACAGGATCGCTAAGcttcttcattttaatacatttttagtgacTGCTCAATACGGATGTACCTTTTTATCCGAGCATTAAAATATGCCGTTGGTGCTTTGTCCTTTT

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0008643 carbohydrate transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K13783 SLC37A1_2; MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU57350 lncRNA downstream 48825 23036457 ~ 23037470 (-) True G38747
TU57216 lncRNA downstream 209858 22873971 ~ 22876437 (-) True G38658
TU57176 lncRNA downstream 293242 22791690 ~ 22793053 (-) True G38634
TU57175 lncRNA downstream 293242 22791710 ~ 22793053 (-) False G38634
TU57041 lncRNA downstream 1045076 22038380 ~ 22041219 (-) False LOC122344815
TU57383 lncRNA upstream 29960 23127219 ~ 23131999 (-) False nrgna
TU57395 lncRNA upstream 248330 23345589 ~ 23345797 (-) True G38767
TU57397 lncRNA upstream 260315 23357574 ~ 23358147 (-) True G38769
XR_006250995.1 lncRNA upstream 504977 23602236 ~ 23605748 (-) True LOC122345364
TU57600 lncRNA upstream 569582 23666841 ~ 23669869 (-) True G38892
XM_043238568.1 mRNA downstream 1370 23078556 ~ 23084925 (-) False pde9ab
XM_043238567.1 mRNA downstream 1370 23078556 ~ 23084925 (-) True pde9ab
XM_043238412.1 mRNA downstream 9901 23070110 ~ 23076394 (-) True oafb
XM_043240855.1 mRNA downstream 19723 23057206 ~ 23066572 (-) False pou2f3
XM_043240856.1 mRNA downstream 21820 23057205 ~ 23064475 (-) True pou2f3
XM_043238177.1 mRNA upstream 1581 23098840 ~ 23104975 (-) True ccdc15
XM_043238178.1 mRNA upstream 2870 23100129 ~ 23104975 (-) False ccdc15
XM_043238281.1 mRNA upstream 8670 23105929 ~ 23119144 (-) True hepacamb
XM_043240775.1 mRNA upstream 29953 23127212 ~ 23132008 (-) True nrgna
XM_043239346.1 mRNA upstream 296905 23394164 ~ 23411152 (-) True LOC122345314
XR_006251119.1 other downstream 1046261 22039901 ~ 22040034 (-) True LOC122346224
XR_006251116.1 other downstream 1126411 21959785 ~ 21959884 (-) True LOC122346220
XR_006250934.1 other downstream 1202273 21878156 ~ 21884022 (-) False LOC122344823
XR_006250933.1 other downstream 1202273 21878156 ~ 21884022 (-) False LOC122344823
XR_006251046.1 other downstream 1260190 21809013 ~ 21826105 (-) False akap10
TU57575 other upstream 504985 23602244 ~ 23604733 (-) False LOC122345364
TU57636 other upstream 654621 23751880 ~ 23756588 (-) True G38917
TU57720 other upstream 790044 23887303 ~ 23887680 (-) True G38973
TU57904 other upstream 1100446 24197705 ~ 24200496 (-) True G39113
XR_006250980.1 other upstream 1490769 24588028 ~ 24594116 (-) False anapc2

Expression Profile