RNA id: XM_043240251.1


Basic Information

Item Value
RNA id XM_043240251.1
length 3015
RNA type mRNA
GC content 0.44
exon number 23
gene id adam28
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 9372014 ~ 9381877 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tttttaagaaaacccAGAGGCTGAAGAAAAAGGGAAGGAAAGATGCATTTTTGAAATTCACATGATGAGCAGACAGCGTCCATAGACAGACCATGAATCTGCCAGTCTCGAATAAAACATAAAGCCAAACAGCACGAGGAGCAACAAAGTTAAGTTGTTCTGTACACTGACAATGGGCAGAAGACATCTGATGTTGTGGATCTTTACTCTGTGTGTTTCACTCGATCCCACAGTCGGTCACATTCCTGAGCTAGATGGAAAAAAGGTGTATGAGATCGTTCGACCAATCAGATTACATGATCTACAAAAAAGAGACTTAAAGTCGAGACCAGACACGGTGAAATATGCCATGACACTGGGTGGTAGAGACATTGAAATGCACCTCCAGAAAAATGATGGCCTATTGACGAAAGGCTATAGCGAAACTTATTACACTGAAGATGGGACGCTTGTCACCACCACACCAGAAGATCTGGATTTATGCTATTATCATGGGAAAATAGTCAATGAGAGTAAGTCATCGGTTAGCATGAGCACCTGCGATGGATTACGAGGCTATTTTAAAACAGAGGAGCAGAGGTTTCTGATCGAGCCGTTGTCTGACGATGGTGAGGGCGACCATGCTGTCTTTAAGTACGAAGACGTTAACGAAGAGGCGCCTAGAGTGTGTGGAGTCACCAACACTACTTGGGACGAGAGCGAGGAAGGCGCTCCTCCACGCATTCTCAAAAGTCGTTCTCGTTCCTCGGGGCCAACTTTCttccaacaacaaaaatacattgagTTCTTCCTTGTGGCAGACAACAGCGAATACAAGAAAATGGACAGCGATCTTCAGAAGCTGAGAAAGAGGATATTTGAGATCATTAATTACATCAATAATGTATATAAAGAAATCAACACATTTGTTGCCCTGACTGGATTTGAAGCCTGGACAGATAGCGATAAGATAACAGTTTCTCCTGCAGCTGGAGCTACTTTGGACGGTTTTACCCAGTGGAGGAACAACGATCTCGTCAATAGACAGCAGCACGACAACGCCCATCTCCTCAGTGCAGTCGACCTTGATGGAGCAACGGTGGGTCTAGCTTACATTGGAACTCTGTGTGGAGGTCTTTCAACAGGGATTGTGCAGGACCACAACCCTAAGGCTATAGCAGTGGGGGCTACTATGGCCCACGAGATGGGGCACAATCTGGGCATGAGTCACGACAGCAGCAGCTGCGTTTGTTCTGATGGCACTTGCATTATGACAGCCGCTCTCAGCTATTTCATCCCTCAACACTTCAGCAGCTGCAGCACAACTAACTATGTAGACTACCTGAACAGCAAAAACCCAGAATGCCTTTTGAATATGCCCAAACCAAAAGATCTGATTCAGCCACCCGTATGTGGAAATGGATTTGTGGAGATAGGAGAACAATGCGACTGTGGAACAGTGGAGGAATGTACAAACCCATGCTGCAATGCCACCACCTGCAAAATGACAGAAGGCTCGCAATGTGCAACAGGGGAATGTTGTGAGAATTGCAAGATCATGTCAGCCGCGCATGTGTGTCGTCCGAAAAATGATGAGTGTGATTTGCCCGAGTCATGCACCGGAAAATCAGCCGAGTGTCCCGAAGACGTCTTTACAGTCAATGGACTCCCTTGCAAGAACGGGAAAGGGTATTGCTACAACGGTCAGTGTCCACAGAGAGAGGAGCAGTGCATTAAAATGTGGGGTCCAACTGCTGTGGTGGCTCGAGACTATTGCTACAACCAGAACACAAGAGCGGAATACTACGCCTACTGTAAACGCAATGGAGATAGCTATATTGGATGCCAAAAACAAGATGTGATGTGTGGAAAACTGTTCTGCGAAAACGGCAATGCAAGTCCCAATTATGGAAGGCtagtaacatttaataattgtaaagCCACATTCTACGGCGATCCTGCCAAAGATTACGGTCAAGTCGACTCTGGCACCAAATGCGGGGAAGGACTGGTTTGTAACCAGAATGAGTGCGTTGACCTAGAAACGGCTTACAAAGCAACAAATTGCTCCGCCAAATGCAGAGGCCATGGGGTTTGTGACCACAGAAAGGAGTGTAGATGTGAAACTGGATGGCTGCCTCCAAATTGTGAAACACCAGCAGGAAGCGAAGGTTCTTCTAAAGGTGTGACAATAGCCATTGCTGTGGTTGTCTGCGTCCTGATTGGGACACTTCTAATCGGACTAGCGGTCTTCTTTTACAAGCGCAGAAGGAGCATGCCAAACTCACTTAGCCATCCAAGGCAGCAGAAAGTTCACGTAGTCGACATCCCCGAATCATCCCTGAACCAGAAGCCATCTCCGGTAATAAGGCCTTCAGCACCTCCTGCACCCTCTTCAGTTCAATCCAGAGCTCTACATAACGACTACCTAAATGCACGTCAGGCACTTAGACCACCTCCTCCAAGGGTGTGACATAACACCTCTCAAACCTCAAGAAGCGAGTCACTCAAGACCCGGCAGACTGGATATAAATGCTACGAGTCTGTGGCTTAGTAAAGTCTTCAAGAGAAGAAAATAAGCCACATGCTCAGCATACATTTGAGACCAACACACCTAAATgaattttacagtgtaaaaattGTCCTTGAGTgacaggttttgtttttaactgaaaataagatttttttttaatgtccctttaatttatttgtacagtcTGTTCCTGTATAATTGAGCCTGCCCTCTATATAGTAAAGATTTTGAGTCAGCAAAACTACCGACTCGTTTTCACAGAAAGCTCAGGTTAGAAAGCAGATTTTCTAAAGTTTATCAAATTTCACTCCCCCCCCCTGTAAAGTCACTACCTCTGCTAGATGTGATTCTATCCTAGATTTTCATTGCAAtgtaaacaacttttaaatgctttaaaaataacattgtggttaatttagtatttatgaaaatgtattttacacgTTGTAAAATGCAATGTGAATGTAtgactgaaatatatatttgcatgctgAAACACATAA

Function

GO: NA

KEGG:

id description
K08614 ADAM28; disintegrin and metalloproteinase domain-containing protein 28

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU51125 lncRNA downstream 123973 9246920 ~ 9248041 (-) True G34704
TU50983 lncRNA downstream 311200 9013306 ~ 9060814 (-) True G34594
TU50996 lncRNA downstream 380701 8991101 ~ 8991313 (-) True G34607
TU50995 lncRNA downstream 380991 8988611 ~ 8991023 (-) True G34606
TU50967 lncRNA downstream 437875 8933911 ~ 8934139 (-) True G34583
TU51339 lncRNA upstream 382196 9764073 ~ 9764532 (-) True G34869
TU51341 lncRNA upstream 384391 9766268 ~ 9766607 (-) True G34871
TU51347 lncRNA upstream 395756 9777633 ~ 9778238 (-) True G34877
TU51619 lncRNA upstream 899532 10281409 ~ 10296141 (-) True G35035
TU51637 lncRNA upstream 955870 10337747 ~ 10341167 (-) True G35047
XM_043240184.1 mRNA downstream 52409 9316654 ~ 9319605 (-) False ogfod2
XM_043240181.1 mRNA downstream 52522 9316654 ~ 9319492 (-) False ogfod2
XM_043240182.1 mRNA downstream 52649 9316654 ~ 9319365 (-) False ogfod2
XM_043240180.1 mRNA downstream 52650 9316654 ~ 9319364 (-) True ogfod2
XM_043238162.1 mRNA downstream 96462 9248321 ~ 9275552 (-) False tacr1a
XM_043238276.1 mRNA upstream 49048 9430925 ~ 9494650 (-) True zmat4a
XM_043240462.1 mRNA upstream 126760 9508637 ~ 9518513 (-) True sfrp1a
XM_043239198.1 mRNA upstream 153656 9535533 ~ 9558371 (-) False loxl2b
XM_043239197.1 mRNA upstream 153656 9535533 ~ 9558371 (-) True loxl2b
XM_043239202.1 mRNA upstream 180048 9561925 ~ 9563296 (-) True LOC122345251
TU51091 other downstream 151507 9215508 ~ 9220507 (-) False vamp5
TU50964 other downstream 441961 8929470 ~ 8930053 (-) True G34580
TU50888 other downstream 694296 8674549 ~ 8677718 (-) False LOC122345093
TU50638 other downstream 940439 8429700 ~ 8431575 (-) True timm8b
TU50633 other downstream 957208 8411882 ~ 8414806 (-) True G34372
XR_006251099.1 other upstream 943238 10325115 ~ 10335342 (-) False si:dkey-96l17.6
TU51745 other upstream 1079331 10461208 ~ 10461709 (-) True G35122
TU52098 other upstream 1486487 10868364 ~ 10874064 (-) True G35371
TU52116 other upstream 1542050 10923927 ~ 10926163 (-) True G35384
TU52323 other upstream 2038078 11419955 ~ 11467122 (-) False hmgn7

Expression Profile