RNA id: XM_043240567.1


Basic Information

Item Value
RNA id XM_043240567.1
length 4465
RNA type mRNA
GC content 0.55
exon number 27
gene id golga2
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30734104 ~ 30754940 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

acacacacacacacacacacacacacacacacacacacacacacagagagagctcATCTGATGACGTGTGCCGCCGCTCGGTCGCTTCGCTCAGCTGTGTGAGAGGATGGCGGACCAGAACAGGCAAATCAAACTCGCCGCAGCCAagaaaaagCTGAAGGAGTTTCAACAGAAGACCACCCCATCCACAGGAAGTGCTGGAccaaagaagaagaggaaggtTAAAGGAGGAGATCAGCTGGACGCAGCGGTGGACAGACACTCGCCGGACAATATTGAGAATATTCTCAAAGTTATGGTGTCTGATCTTAGTCTGACGAATGGAGTGTCTCAGCCTCCATTAGTCAACGACAGCCAGGATGATGTGGATGCGGTGATCCGGGTCTCtcaggagctggaggagagCGCCGCTGAGCCCGTCTTTAACCCCGCTTCTGCTCTTAACTCTGAGTGTGTGGCTGATAGCGCTGAGCTGCAGcAGAAGTACGCAGCGGATGCAAACGGCGATGAACACGCTCTGGAAGATAACAGGCCGCTGTCGTCCACCGAGAGCCTGAGACAGATTTCCCAGCAGCTCAATGGCCTGCTGTCTGAGACTCGTAACCAGGATCTGGCAGCGGCTCTGGactccagcacacacacaaacgcccAGCTCACGACCAAACTAGAGACACTGACGAAGCAGTCTCAGGAGCTTTCTGATCAACTACAGAAGGAACGGAAAGAGTTTGAGCAGAAGTTCACAAAGGAGCAGGGAGCGATGCGAGAACAGCTGCAGGTTCACATTCAGACCATCGGCATCCTGGTGTCTGAGAAATCAGAGCTACAGACGGCCCTGTCCTACACACAGCAGGCCGCGCGACAGAAGtcagcggaGGCAGAAGATCTGAGCTCGCGGCTGCTGGCCGGTAAACAGCGAGTGTCGGAGTTAGAGAGGACACTATCTTCAGTCTCTACACAACAGAAGATGTTCGAGAAGcATAATAAAGAGCTTGAGAAAGAGCGAGACAGTCTGCGATTAGAGGTCCTCAGGTTTAGTAACGCGAGCGAGGAGTCCAGGCAGCAGAGCTCGGAGCTGTCTGAGCAGCTCAAGCTGAGAGTCCGTGAGAACAGCGGCCTGAAGCAGGAGGTGGACGAGCTCCGGAGGCGGCTGGAGATGGCCGACAGCATGCTGCAGCAGTTCTCCAGTCAGTCCGGTCCTCCGTCTGAGCACCAGCAGGTTCAGCTGCTCCTGGACGAGAAGCACCAGATGGAGACTCACGCGGCTCAGctgatGGAGTCGGTCGCTCAGCTCCAGGTGGAGAGAGATCAGTACGCTGTACAGATTCAGGAGGAGGGACGCGTGTGGAAGGACAAAACAGAGCAGCTTCTGTCTCAGgtgCGTCTGATGTCAGAGGAGCGGGACAGCACTGCCGCTCAGATTCAGGAGCTTCAGGAGAAGATCACAGAGCTGGAGAGCGCTGCAGCTCTGATGAGTAAAGAGCAGGAGCCTCAGGCCGTGTCACAGACCCCGGGCCCTTCAGAAAGCGAACTGGCCCTTCAGGAAACCATCAGCAGCCTTCAGCAGGAGAGAGACGCTCTCAGTCTGCAGTACCAAGCACAGGTGCGAGACAATGAGCAGCTGAGCCGGCTGGtgcaggaacaggaagtgaggcTGGAAGAACTGGAGAGACAGGCGGAGCGGGCCGCCGGCGAGGCTCAGGATCGGCTGCGGATTCTGGAGGACGTCCAGAGCGACAAGGCCACCATCAGCAGAGCCCTGGCCCAGAACAGAGACCTCAAAGACCAGCTGGCCGAGCTCCAGAACGGCTTCGTCAAGCTGACCAACGAGAACATGGAGCTGACCAGCGCTCTGCAGTCCGAGCAGCACATCAAGAAGGAGATCGCTCGTAAGATCGCTCAGCTGCAGGAAGACCTGCACAACGCCAAAGAACAGCTGCAGGAGAGGTCTGCAGAGCTGGCGTCTGCGCAGGAGCTGCGGGATCAGTACCTCTCTCACCTGCAGCAGTACACGGCTGGGTACCAGCAGCTGGTGACGGAGCGAGAGCATCTTCAGCATCAGTTCCTGCAGCAGGTGCAGCTGATGGACCgcctgcagcacgacgaggtGCAGGGCAAAGTTCAGCTGGAGCAGAGCCACGTTCAGCTGCAGGAGGCGCAGGAGAAGCTGAAGCAGCTGGCCAGAGATAACGAGGAGCTGAAGACGGAGGTGCAGGAGCTGCTGAACAGCTCTCACAGAGACGACGGTGACGGCCTGGAGAGTCACTCTCTCCCGGAGAGCTTCCAGAAGTCACACGTCGTCATCCCCGAGGACTTCGAGAGCAgagaagagatgGAGGAGTTCATTCACTCCGCTCTGTCGCgtctggaggaagagagagatgagatGAGCCGGCGCTTCGAGGAGGAGAGGAGACTTCATCACGCCGTCCGACAGCAGATGACGGCCATGAGCCACGAgcatcatcaccaccatcatcatcctcatcctcacagCGCAGgaggcTCTGACGGGGTTCCTGTGGAGGTTCACGAGGCTCTGCGGGTGGCTATGGAGAAGCTCCAGGAGCGTTTCACGTCGCTGATGCAGGAGAAGGTGGATCTGAAGGAGCGTGTGGAGGAGCTGGAGCACCGCTGCATTCAGCTCTCAGGAGAAACAGACACCATCGgagaaTACATCGCGCTGTATCAGAACCAGAGAGCCATCATGAAACAAAGACACTATGAGAAGGAGCAGTACATCAACATGCTGGCCAAAGACAAGGAGGAGATGAAGacgaAGCTAGCGGAGCTGCAGGATCTGGTCATGCGTCTGGTGGGCGAGCGGAACGAGTGGTACAGCAGATACATGAGCGCCGTCGGTCACCCTGACCTCCTGACCTCTGGAGGAGAGCAGCTCCATCCCACTGACGAACACACGGACAGCCCAGCCGTTCTGGACCTGAGCACAGCGGTGGAGGCTTCTTCAGCTCCTCAGTCCAGCACGGACCCTCAGAGTCAATCCCAGAGTCCCGAGAGGCCTGGGCCCGCTCCGGACGGCCCGTCCCTGAGGCCCAAAGAGGACGGCACGGCCCGCCAGATCATGCAGCTCCTGCAGGAGATCCAGAACCCTCAGGCCAGGCCCGCTCCCTTCCTGGGGGAAAACCCCTGCATCCCGTTCTTCTACCGGCCGGACGAGCACGACGAGGTCAAGATCCTGGTGGTCTGAGAGCTCTCCCGCTCGGCTGCCGACGAAACGGACTTTGCGTGTTAAATGGGTTTCccctctctgtgtctctggTCTCTGCAGCGGATGAGAGAGATTCGTTTGGGTTGTGTGTAAACCGGTTATCATACTTTCGCTGCTCTGTCTTTTCCTTCACCCGTTTGTCCTCCTCACTTTATCAAGCCAGTGCAATAGACGGATCAGTGATTCATATCGGTGAGCTCGCACACTACCTAGGGCGCACTGAAGAGTAATATTGATATGATGCAGCAGGTCTGAGACGATCGAGTGTTTTCTGAGAGAACCGGATGACGAGGTGTTTGTTCGTTTGCAGAGCACGTAGGGCACAGTATTGAGGAAGACGTTAAATAATTTGATCCTAAAGTGCTTAGAGTTAAGGTTAGAATCGAGCCGAGAGCGTTCAGGACACGAGGACACGCTTTTTCTTTTCCAATCGGGGGTTTATTGAAAGATGTAACGATAATTTAATCCCTTCAGccccttgtgtgtgtgtgtgtgtgtgtgttttttccggAGCGCGTGACGTCGAAGCTCTCGAGATGTTAGCGATTGATTGTTGTAGCTAACTCTATGACGCTAGCGTCCGTCGGCCGAGAGTTTGGTGGCGATTGCTGTACATACGTCGGAGAAAACGATCGGCGAGCTCGTTCGTAAACGTCTCATCGGATTCGGCAACACGTTCTGCGAAGGCAAAGCTCCGCTTCGCGTCTTGTTTTCGTAAGTAAACGTACACCTTTCGACGAGCGCCGCGCATCATTCTCTTTAGCAGGGCATGCATATTAATCTACGGATATTTACGCGAACATTGAGCGGTTGTGCGTTGCTCTCCGATGCTTCGTAGAAAGTGTTGCCGtgtctcgtgtgtgtgtttctaactGGAAGCGAGTGCTGCGTCTGGCCTGCCGTCTCTGTCCGTGCTCTCCGcgtatgaatatttttttcccgGTGAATGTTTCGGGCATGGGCGTGTAAATAGTGTAACTGTGTATCATACTGTATATTGAGCGAGGAAGGCTTGCGTTTGCCTGCTGAAGATGAGTCTGGTGCGGAGAGAGGACGGGATGCTCGTGTGCTTTCATACTACGGCTGAACTAAAGGAGAAGTCTATTTATTTGGGATAATTACACACTAATCTGTTTTAATCTAGACCGATGGAACACAATGAAGGAATAATGAGTAGTTTGAGCAGAAATACTTCTGTGATGATTTTCCTCCTAAATAAACCTGATTGAGCAAAAA

Function

GO:

id name namespace
GO:0005794 Golgi apparatus cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60251 lncRNA downstream 744 30631028 ~ 30733360 (-) False G40711
TU60254 lncRNA downstream 2866 30679158 ~ 30731238 (-) True G40711
TU60247 lncRNA downstream 8878 30720192 ~ 30725226 (-) True G40708
XR_006251069.1 lncRNA downstream 23426 30708773 ~ 30710678 (-) True LOC122345983
TU60290 lncRNA downstream 24213 30708870 ~ 30709891 (-) False LOC122345983
TU60299 lncRNA upstream 15774 30770714 ~ 30772024 (-) True G40739
TU60336 lncRNA upstream 62792 30817732 ~ 30825296 (-) False G40752
TU60329 lncRNA upstream 66185 30821125 ~ 30828314 (-) False G40751
TU60330 lncRNA upstream 66185 30821125 ~ 30828314 (-) False G40751
TU60332 lncRNA upstream 66185 30821125 ~ 30828314 (-) False G40751
XM_043238233.1 mRNA downstream 62008 30660119 ~ 30672096 (-) True ciz1a
XM_043239944.1 mRNA downstream 78147 30653163 ~ 30655957 (-) True surf2
XM_043239943.1 mRNA downstream 81794 30646286 ~ 30652310 (-) True surf4
XM_043240478.1 mRNA downstream 89367 30622204 ~ 30644737 (-) True ass1
XM_043238534.1 mRNA upstream 10691 30765631 ~ 30769907 (-) True LOC122344907
XM_043238521.1 mRNA upstream 76249 30831189 ~ 30835734 (-) True rabepk
XM_043238238.1 mRNA upstream 165877 30920817 ~ 30941882 (-) True LOC122344688
XM_043238243.1 mRNA upstream 187574 30942514 ~ 30951488 (-) True cux2a
XM_043238956.1 mRNA upstream 223653 30978593 ~ 31052589 (-) True mcc
TU60256 other downstream 37416 30631028 ~ 30696688 (-) False G40711
TU60253 other downstream 37416 30650941 ~ 30696688 (-) False G40711
TU60233 other downstream 120963 30604844 ~ 30613141 (-) False fubp3
TU60232 other downstream 130611 30600901 ~ 30603493 (-) False fubp3
TU59791 other downstream 640591 30091949 ~ 30093513 (-) False rnf170
TU60266 other upstream 34693 30789633 ~ 30792719 (-) True G40713
TU60335 other upstream 64575 30819515 ~ 30826358 (-) True G40752
TU60340 other upstream 64575 30819515 ~ 30826358 (-) False G40752
XR_006251005.1 other upstream 947513 31702453 ~ 31711737 (-) True apooa
TU60769 other upstream 966330 31721270 ~ 31722906 (-) True G41035

Expression Profile