RNA id: XM_043240716.1


Basic Information

Item Value
RNA id XM_043240716.1
length 9464
RNA type mRNA
GC content 0.53
exon number 17
gene id kat6a
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2876309 ~ 2910382 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGCAAAGCTCCTGTTTCGCTCAAAGATGGCGTCAGCTCTGGAGCCACTGCTCTCTGGCTGCATTTTTGGGCTTGTTGTTGTCTGTGTTTCGAACGCGTTCCGGCACGTTCTCCTCGTCCACTCGACCCAAAACCCCGGTTGCAGGAGCTTCTGAAGGACACCACTCCGTCGGATGATGGTCAGCCTGCGTTGCTTTCTGGAGTGAGGGATCTGTTCTGGACTGCTTGTTCCGACAGGTTCAAGCCGGACAGTGTTTTCACGCTTGCGTTTCCTTAACAGAAAGTCTACAGAAGCGCCGCTACAATTCTTTACAAAGATGCTCCATCTAAACGGATAACACCGAGCGCCAGAATCCAGGATTCTACCGGACTGACTGCTTTTGAGACGGGGCGGATAAGAGCGACACCCGAGGCTTTCGCGGCTCTACTTTCTCTTGGAGTAGTCGCCGTCTGTCGCACACCTCACCTCTTTGCTTTGGCGTGGCAGCCCTTCAGACGGGAGGGTCATTGGGTTAGAGGGATCTGTTCTAGGTTGGGGGGGGGGATTTAGGGAGCCTATGCTATGGTGATCGGCTCCCTCTCTAACAGCTCCTGCTCAGGCACAGAGATACTTACTACACCTCCCCGGGACAAAGGATAGCCTCCTGGAcgaagagagaggaggaggaggacaacGACGAGGCAGCGCCAGGGCTGAGGCCACTGGGTGCTTCCTAACGGTTGTGAGAGCGTGTTGGGCCTTGGCCCAGCGGTATTACAGCAGCCATGGTGAAGCTGGCCAACCCGTTGTACACCACCTGGATCTTGGAGGCCATCAAGAAGGTAAAGAAGCAAAAGCAGCGGCCGTCCGAAGAGCGCATCTGCAATGCCGTGTCAATGTCGCATGGGCTTGACCGCAAGACGGTCCTGGAGCACCTTGAGCTCAGCGTGAAAGATGGCTCCGTACTCAAGGTGTCCAATAAGGGGCTCAACTCTTACAAGGACCCCGAGAACCCTGGACGCTTGGGGTTCACAAAACCTCGGCCGGGAGGCAGTTCCAGCACCTCCGGCTCTAGCAAAAAGCCTGGTCTGGACTGGAACAAGCTCATCAAGCGCTCTCTAGAGGGGCTTCACGAACCCGGCGGCTCGTCCCTGAAGAGCATCGAACGCTTTCTGAAGTGCCAGGCGGATGTCGCGGGGTATCTGTCCGGCAGCGGCTCCATGGGGCCGGGCATTTTCCACCAGCAGCTCAGACTGTCTCTGAAGCGGGCCGTTTCTCACGGACGGGTGATGAAGCAAGGGCCGCTCTTCCGGTTGGTAAGGAGTTCTCATGACGGGACGGGCTGCGTGTCGCTGGATTCTCTGCCTCCGGTGCGGCTGCTGCCTCATGAACAAGATCGGTCTGTGGCAGAGCCTATACCCATCTGTAGTTTCTGTTTGGGGACCAAGGAACAGAATCGCGACAAGAAACCAGAAGAGCTCATCTCCTGCGCAGACTGTGGGAACAGTGGGCACCCGTCCTGTCTGAAGTTCTCTCCGGAGCTCACCGCTCGGGTCAAAGCTCTGTGGTGGCAGTGCATCGAGTGCAAAACCTGCAGCAGCTGCCAGGACCAAGGAAAAAATGCAgacAACATGTTGTTCTGTGACTCCTGTGACCGAGGTTTTCACATGGAGTGTTGTGACCCCCCACTGATGCGAATGCCAAAAGGCATGTGGATCTGTCAGATCTGTCGGCCGAGAAAAAAGGGAAGAAAGCTCTTACACGAAAAAGCAGCACAAATCAAGCGGCGATATAATGCACCACTTGGGCGGCCGAAGGGCAGACCGGGCCGTCCTTTTAAGAAGCTTCGAGGTGGTGGGCGTGGCAGGAGAAGGCGGGGTGCTGGAGGCGTTGACCAATGTTCTCAAGGCTCCTCCTCCCCACACTCCTCCTCCAGTTCCTCGTGCGAAGGCTATCCCGGCGACGATCGCATGCTGTTCTCTCTCAGAGAAGACGATTCCTCGCACGGCGGCCTGCGTTTCAACAAGAAAACGAAGGGTCTGATCGACGCCCTCAGCAAGTTCTTCACGCCGTCTCCGGACGGACGGAAAGCCCGCGCTGAAGTGGTGGACTATTCCCAGCAATATCGTATTCGCAAGAAGAGCAACCGCAAGGGAGAGCATGATGACCGGACCGGAGACAATCAGGATTGTGGAGACAACTGGCGAGAGGATGAAGACAAGCTGCCAGGACACGAGAACCTAACTGAGAAAGACGTGGAGCTCTTTAGGCACATTCAGGAGCTGGCACTACAGAAGGTCGGGGTGACTGGTCCACCGGATCCACAAATGCGCTGCCCGTCTGTTATAGAGTTTGGGAAATATGAAATTCAGACGTGGTACTCCTCTCCATACCCACAGGAGTACAGCAGGCTCCCGAAGCTCTACCTCTGTGAGTTCTGTCTGCGCTACATGAAGAGCCGCAGCATTCTCTACCAGCACATGCGAAAGTGCAACTGGTTCCACCCGCCTGCCAACGAGATCTACAGGAAAGACGACGTGTCCGTGTTCGAGGTGGATGGAAATGTCAGCACAATATACTGTCAGAATCTGTGCCTGCTGGCCAAGCTCTTCCTGGACCATAAGACGCTGTACTATGACGTGGAGCCCTTCCTCTTCTATGTGCTCACACAGAACGACAGCAAGGGCTGCCATCTCGTAGGATACTTTTCAAAGGAGAAGCATTGTCAACAAAAGTATAACGTATCCTGCATCATGATTCTTCCACAATACCAGCGCAAGGGCTATGGGCGGTTCCTCATTGACTTCAGTTACCTGCTGTCCAAGAGGGAAGGCCAGCCGGGCTCACCAGAGAAGCCGTTGTCAGACCTTGGCCGGCTGTCCTACATGGCATATTGGCGTAGTGTGGTGCTGGAGTGCCTCCACGAGATCAGAGATCGACAGCTCACCATCCGCAAACTCAGCAAAGTCACTGGCATTTGTCCTCAAGATATCACGGCCACTCTGCTCAATCTGAACATGCTGGAGCAGAGAGGAGACCGAGTGATTATTCTGCGACGAGAGAAACTGGTGGCCTCTCACATGGTCCGACTTAAAGCCAAACCTCGACTCCTTGAAGTAGATCCAGACTGCTTGCGCTGGACACCTGTTATTGTCACCAACACGGTAGTATCTGAAGGAGAAGGggatgaagatgaggaagaggaagaaggagaGGAGGGACCTAAAGATATCAAACCCAGCCACAAGAGCTCCCCGCTCTCTTGGCATATGAAGGGGGAACGGGAAAAGGAAGAAGACAAAAAGAGCTTCCCAGCGTTCCCAAAAAACCAAAGCTCTCCTCCGTCCTCTTCTGTTTGCAACAGTGTTCTCAGTCCTGAACGTTCTGCTCTTTTTCTCACGGCTAACGGGGAGCGCAGGGGACCTGGCCGCCCTCCCAAAAACTGGTTATGGGGCAAGGTGAAGGACGTACCACGTACAGGACCAGGTCGACCCCGTAAACTAAGGCCCCCAGAGGAGGAGGACGACGAGGATGATGACGAGGAGGATGAcgaagaggaggaggatgaggatgaggaagaggaagaggatgaaaGAACTGGCATTAATAAAGTGACGTCATCGATGCGCTTGGCCTTGGAGAACGAGCCCGACTCCACATCAGCCTGTCCCTTGGAGGCTTCTAGGCACCCCGCGGTTGCACAGTCTCGCAGCAGAGGGCGCCCTCCGCGGAAAAAACGAGGCCCAAAACGCAGGCTTAGCGAGGATCCTGAAGATGATCTGCCATCGTTGCCCCACACCACAAGGCTGAGTGAACCCCCGCCTGCCTTCATCAGCGAGAGCAGCGAGGATGAGGACGAAGATGAcgaagatgaggatgatgaggaagAGCTGAGGAGTCGCTCGCCGCCTGTCCTCACCAAGCCCACATTAGGGCTTAAATGCAAGTCTCAGAAGTCCTTGCGGAAGAGGCGTATACGTCAGCGCAGCCATCCCCACAGCAGCGTcgttacagagaccatctcggAGACAACTGAAGTCCTGGATGAACCATTTGTCGACTCCGATTCTGAAAGACCCATGCCCAGACTAGAAGAAGAAACCCCATTTTGCAACCCTCTTCGACGCTATGCAGCAGCCCGCAAACACATGGGACCTGCCCCAAAAAGCATCAACAGAGGCAATCTGACTGAATCCGAGGAAGACGATCCCACTCCTGTGCTGAAGCCGGTCGGTGCCCTGAGAAAACCTGAACTTTCTGAGGCCTCACAGAGAACAGGGGCTACAGCTGAGATGCCTGAGGTtccaataaaaagaaagaaaggctgGCCTAAGGGCAAGAGTCGCAAGCCGGTCCACTGGAAGAAGCGTCCGGGCAGAAAGCCCGGTAGCGGAGCCGGTCAGACAGCTGACACTAGTCTAGCAGATCCTTCTTCAGAGGACCCACCACCTCCAAAGATCAAAATGAAGCCCGGCAGGAAACCTCGCAGCTATTACCTGCAGCGTGCGCAAGAGGAGGCAGCCAGACAAGAGTTTGAGCAAAGCCGATTAGCTCAGGAGCAGCTAGATAATTCAACACTGGAGGACAAGACCTGTAAAAGGACAGCCAGAGCCTTAACGTCCGACCTCAGTCCTGAGAAGCAGAAAGACTCGGAAGAGGAGGACGATTTCCTTCAGGACTTCAGAGAGCCATCCAAACCCAAAAGACGAGGTCGGCCACCAAAAAATGGCAACCTCCCTCCTCCTGTACCCAAACCTCCTCCTGTGTCTGAGCCagaagaggaagatgaggaggaagagCGACCGTGGTCAGTAGAGAAAATCAGCCGCCCGCCTTCTCGTACCATGTCGCAGTCTTCCAGCACTAGAGTGTCACAGCCGAGAGCTGATGCAGAGGAAGATGAAGAGCGGGATGATGAAGATTGCGATAACGGGGTTAACCGGAGAACAGCAGCAACGCCCGGCTCCGGAAGCCGGCGCAGCGACGATCACGATGCCGACGACGAGGGCGATGGTCGCCTCGAAGAGAAAAGTGACAGCAGCAGTAGCAGTAAAAGAAGGAAGGGCCAAGACTCTGAGGATGATGTGGAAGAGCAAGAAGacgaagaagaggaggaacCGTCATCACCTGCTCGCTCTCCCCCCGTGAAGGAAGAACCCCAGAGCAGTGAGGGTTTTTTAGACATGCAGACAAATGTGGCAAGGGACTACGTCAGCAAACAGGAAGAAGTTGAAGACGAGGAGGAGGATGCCGAAGAAGTGCAGGAGGTGAAAACGAGCTCTGCTGACACGGATGAACGGCGTCGACGAGAGCAGGAGGAATCTGCAGCGGCCGCGGCGGCTGTGGAGACGGTGACCGCAATCGCGGTGCCTTCCGAGCCGATGGACATGCATCCTTTACACGTCGAGGACAAGAGCGTGCTCATGATGGAGACCGAGCACGCACACCAGCATCCCGACTTCAAAGATGACCTGAGCCACCAGCAACACACGCATCACCACAGCAGCGAGCTGGACCTGGAAACCGTGCAAGCTGTGCAGTCTCTCACGCAAGGCGAGGCCCAGGAGGAGGACACGGAGTCCCACGGAGCTTACCAGGACTGTGAAGAGACGCTAGCTGCTTGCCGGACTCTGCAGAGCTACAGTCACGGCGAGGGCGAGGAGGAGACGCTAGCTCTGGTGGAGGACTGTGGAGCTTCCCAGCACAGTCCCATGCCTAACCCACCTATGCCTACATTACCGAACCAGTCTGTCCGTTCGGTCAGCAGCCCCGGGATGACTCCTGGTCCGATGGATCCTGGATCGGGAGTGTCTAACCCTACGGGAACCGGAGGGGGAGCAAGTGGAGCATATACCCAGATAACCCCAGAGCATCCCAGCTCTTTATCCGCACCCTCGTTGCAAAACATGGAGACCTCTCCGATGATGGACGTGCCGTCGGTTTCCGATCATTCCCAACAAGTGGTAGACAGTGGATTTAGTGATTTGGGCAGCATTGAAAGCACTACAGAGAACTACGACAATCCAAGCAGCTACGATTCGACGATGGGCGGTAACGGAGGCGGCAGTGGAAGCAACGGAGGTGGCATGTCCGCAGCGGCAGTGGCGCCGTCCTCGTCTTCGTCCTCGAGTTCAACCACGCCGTCGTCGTCGTCTTCGTCGTCTTCGCAAGGCAGCAGCTGCTCCTTCATCTCCACGTCCTCCAGCACGGGAGTCAGCTCTCAGATCGCCATGGGCAGCTGTAGCCTCATCCAGCAAGCCGGTGGAAACGCCGTACCACAGCCGCCGCCCCCTCCTCCTCCGCCTTCCTCTAGCACACCGAGCTGCGGAATAAAATCTCCGCAAGGCTGCGTCATCGAAAGGCCGCCGAGCGCCAGCCAGCAGCAACAGAAAAAGGTCTCGCAACCGActcaacagcagcagcagcagcaaaacCCTCAACCGCAGCCTCCGCCCTCCGCtcctccgcctccgcctcctCAGCAGCAGTCGCTCTCGCAGTGCAGCATGGGAAACGGCTTCGCCTCCACGCCCATGATCATGGAGATCCCCGAGAGCGCCAGCAGCGCAGGAGGAGGCCGGAGTTTGTATGACCGCATGGGGCAAGACTTCGGCGCCGGCGGATACAGCCAACACTCGGCTTCTTTCAGCTTAGCCAAACTCCAGCAGCTAACCAACACCATCATGGACCCCCATGCCATGTCGTATTCGCATTCGGCTGCGGTCACGTCGTACGCGACCAGCGTTTCGTTATCCAACCCGGGCCTGGCGCAGCTCGCTTCTTCTCCGCACCCACCTTTACCCCAAGCACAACCCACTATGACCCCACCTCCAAATCTGAGCTCCGGCTCCATGAATCTCGGTTCGCCTTTGATCCAGTGCAACATGACGGGCGCCAACATCGGACTGCCGCCGCCTCCGCACACGCAGCGCCTGCAAGGCCAGATGGCCACAGTCAAAGGCCACATTTCGATTCGCTCCAAAGCCTCTCAGATACCCACGGGCTCCCCTCACCAGCAGCAGTTGTACAGCCGAAGCTCTGGAGCTGTGACCATGCAAGGCTCTCCGCGAACTTTAGCGGTGCAACGCGGCATGATGACGAACCTCATGCCTACCCCTGCCGCTTACAACTCCATGAACATGAATCCGCTCAACGCTGCCATGTCTGCCGGCTACCGAATGCCGCAGCCCATGATGAACAGCGGGTACCACAGTAACCCGCCTTACATGAACCAGCCAGCCCAGTACCCCATGCAAATGCAAATGGGCATGATGGGAGGCCAGGCTTATCCGCAGCAGCCTATGCAGCCCAATCATCATAGCAATATGATGTACACGGGCCCCTCGCACCACAGCTACGCCGGCGTCCCCAAACAGTCGCCTTACATGAGCAGATGAGCGGCGGAGAAAGAGCAGACTCTGAATCTCTCTGTACTTTATCCATTTGTTTCCACCACCCTCCAAAGTCCGGGACGAAACAGCAACTTGGTGGAGGAAGAGGACATAGAGACTGCGACGatttcttttcctttataaATATGTTGTCGTCAAGCTCTGATCCTTTTTAGGTTCATTTCCCAATTGCCCGAGCTGGGGAGATGATCTAATGGACCTCGATTAGGGCTAGCGTCATGCTCCCCTGTGTGGACCAACAGGAGTTGGTTTCCACCGAAACGTTCGCCACCGAGAGCGAAGAGGCGACGCATCAGAGCAGCTACAGGGGGAAGTGGACCTAACCTttcaaactgagaaacaaatgcatttacgTTGTTATCGAACATGCATACATTGAATCATGCACACAATCGTTCAATTGACATAGGAAGccttacctaaaaaaaaaaagagacaaaataattgtagatggactattttttttttctttttttattatattattattattatttactttatttttaatatgttcttgtttttttttttttgttgttgttttttttcaatgactGTTTCAATGCTTGTGTTTCAGGCTGACCTTCTCATGCTTTATGTGTGTGGACTAAGTGATTCACGCTCGCTCATACGCTCACTCATGAACGCATTCGCTCTGCAGCCGCTCGAGAGCTCACGCGGAGTTCTGTAAATCGGTGTCTTCCCAGTACGGAATCGTGTATATCCAAACATAACCGAAATGGCCCAAAATGACCATGCATCCATAGGCCGGGCTAGTCAGAAGTCAGTAATGTAAATATTCTGGTACTACCTGGTTCACAGCACAGAAAACGGTTTCATAAACACTCCACGGGTGTCACTGCAGCGCTCAGCGGTGGGAAGgtctttaattaatttcttgCTAAAGCGCGCAAGGGCCCGCGTAACGCTGAAGGGGTAAACCACGCGATTAGCGTCGCTATGATTGTGCTCATCCGGCGACGCTAAAGACGCCTCCCAGAGTAGGCACCTCGAAGTAAGTAGCGCTCCTCGTACTCCAGCTGATCATGGGGTAGTGATGTTAGCTGTTAGCCACCAGAGGGAGTTGTACAAATAAGTAGGTCCGTGTCTGCAATGCACACATGGACAGATGAACACTCACACCCGGGATAAAGGTTAAAGTGCATGATGTCCTGAGATGGTTACTGTTTTAGGACCACGAGCAGAGAATTTCTTAATGTTCCAGTATTCATTGTCGATATGAGGAATCTTTCTCGAAGACCTGACGtttcatatattatttgtgcgcttttgtttttctgaattttatCAGACTGGGCAGCTTTCTTTTATGACAAGCTGACTCTTTTTGACTTTAGAAGACTTATTgtagagaaaatgttttttctaaaatataaacaaaaaaaaaagaaattctgacATGGATATTGgtactgtcatttttttcacttctgtttcaggaaaaaaaaaaaaaacaatgcatattttttagcTCGACTCTTGGGGTAATATTATTAAGAaattcaaaactaaaaaaaattacaactcACTTTTAGTGAATTTAAGATGCCTTTAACCTTTCCATTCCATCTCATCTCTAGAGTTTTCTATCTTTGTGTAGTAtattaatgctattttaaaacaaaaggaaaaaagagatATCTAAAGGTCACTTAgcgttattttctttttcttttcttttcttttttttcttggttattgtgtgtgtataggaCAACTTCCTTACATCTACGAGGCATGTAAAAATGAGCTCAGTATATTTCTGTCTGTTTATATTGCTTACCTTTTCGTATACTTTGTAATTGTACATGGTGAATTGTAAGCTAAGAGAGAGCCTGGTAGCcggcgaaagagagagagccaAGCTGGGGCGCTCGGTGATGGTCGGAAGCGTCCACCTTCCACTCCTCTCTGTTTTGTCCTTGTATGTATTTCCATTTATTcgtttctttctattttttttttttttttcttagcaagTACTTTCAAAGAACTCTGTACATTTTAAcatggaacaaaaataaattatgttgaGCCATTTCACTTACTGTA

Function

GO:

id name namespace
GO:0006334 nucleosome assembly biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0009880 embryonic pattern specification biological_process
GO:0001502 cartilage condensation biological_process
GO:0010172 embryonic body morphogenesis biological_process
GO:0009952 anterior/posterior pattern specification biological_process
GO:0016573 histone acetylation biological_process
GO:0014036 neural crest cell fate specification biological_process
GO:0048703 embryonic viscerocranium morphogenesis biological_process
GO:0000786 nucleosome cellular_component
GO:0003677 DNA binding molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0004402 histone acetyltransferase activity molecular_function

KEGG:

id description
K11305 MYST3, KAT6A; histone acetyltransferase MYST3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU48421 lncRNA downstream 78710 2749959 ~ 2797599 (-) True G32881
TU48425 lncRNA downstream 102119 2767779 ~ 2774190 (-) True G32883
TU48427 lncRNA downstream 105938 2769201 ~ 2770371 (-) True G32884
TU48423 lncRNA downstream 109538 2765283 ~ 2766771 (-) True G32882
TU48406 lncRNA downstream 147502 2652444 ~ 2728807 (-) True G32870
TU48461 lncRNA upstream 26099 2936481 ~ 2936938 (-) True G32906
XR_006251081.1 lncRNA upstream 38102 2948484 ~ 2950332 (-) True LOC122346059
TU48473 lncRNA upstream 72385 2982767 ~ 2984983 (-) True G32910
TU48477 lncRNA upstream 170525 3080907 ~ 3120371 (-) True G32914
TU48486 lncRNA upstream 265337 3175719 ~ 3176249 (-) True G32922
XM_043240521.1 mRNA downstream 1416 2866165 ~ 2874893 (-) True ap3m2
XM_043240515.1 mRNA downstream 10266 2824171 ~ 2866043 (-) True tet3
XM_043240518.1 mRNA downstream 21216 2824171 ~ 2855093 (-) False tet3
XM_043240517.1 mRNA downstream 21216 2824171 ~ 2855093 (-) False tet3
XM_043240516.1 mRNA downstream 31025 2824171 ~ 2845284 (-) False tet3
XM_043238144.1 mRNA upstream 89874 3000256 ~ 3012721 (-) False LOC122344624
XM_043238143.1 mRNA upstream 89874 3000256 ~ 3012721 (-) True LOC122344624
XM_043239626.1 mRNA upstream 112467 3022849 ~ 3089522 (-) True LOC122345463
XM_043238173.1 mRNA upstream 433177 3343559 ~ 3368707 (-) True gnb1l
XM_043238174.1 mRNA upstream 433178 3343560 ~ 3376526 (-) False gnb1l
XR_006250982.1 other downstream 270394 2587553 ~ 2605915 (-) False add2
TU48396 other downstream 290883 2580548 ~ 2585426 (-) False snrnp27
TU48378 other downstream 322163 2496504 ~ 2554146 (-) True G32857
TU48163 other downstream 853415 2020108 ~ 2022894 (-) False LOC122344636
TU48140 other downstream 908561 1966637 ~ 1967748 (-) True G32676
TU48454 other upstream 25361 2935743 ~ 3012819 (-) False LOC122344624
TU48464 other upstream 41080 2951462 ~ 2960177 (-) True G32908
TU48805 other upstream 975043 3885425 ~ 3894475 (-) False piwil2
TU48804 other upstream 975168 3885550 ~ 3894475 (-) False piwil2
TU48820 other upstream 1234545 4144927 ~ 4193081 (-) True LOC122346168

Expression Profile