RNA id: XM_043240756.1


Basic Information

Item Value
RNA id XM_043240756.1
length 2221
RNA type mRNA
GC content 0.41
exon number 6
gene id zgc:73226
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 32301359 ~ 32310140 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTATCCACTCAAACGCACACAACAACAGTGTTGTCAACACACACAGAGGACAGGAAAACACGGGCAAAGAGGGTCGAGAGGAGCTGAAGTCAGTGCATCTGTCCCATCATGGCTCTATCAGGATCTCAATCACCGGATGATGCTTTGCACGGCTCTTGGGTGGAGCTGGAGGGTCTGGTGTCTTCTGCAGGTCAGACAGAGGTTCAGGACTCCTCGGCCTCTTTCCTGCAGGGGGAGCTGGAGAGGATTCTTCTGGAAGCTCAGCTGGAGTGTGAGAGGAGCAGTCAAACAGAAAGTCCTCCACAGGTCGTGACCCCGAGAACATCGGGAtctcccaaaccaggcagtgaggGCAGCAGCAGCACAGATTGTGTGACTATACAGTCGGACGAGAATGACAGGCGAGTGAGTGCCGAATGGGTGTGGGACTGGTCCAGTCGGCCAGAAAACCTCCCTCCCAAGGAGTTTGTGTTTCATCACCCAAAGCAGCCCGGCTCTCTGAGCGTGAGGAAGACGGAGGTGATGAAGAGGGGTTTGTTTTCTTCAGACGtgctcctcatcctcctgcccTCTCTGCTCGCCTCACATGCTCTGACGCTGGGTCTGGGAATATACATAGGAAAACGGCTGGCGTCCTCCTCCACCAGCACGCTGTAACATGTGACATTTGGCAGCTCACCGATTGGCTGAGGCCGCTGCCATTAGCACTGCAGCCCAATCAcacttctcttctcttcctGTGATGGGCAGCAGCCTCTTCTGCCTCTGTCTGTGTTTCTTCCGTCCCACCGCAaaactctctttctctgtctccatgtatttaaaggggtcatatcgCCAAGAATCAAATTGACTTTGATACGTTTAGATAAAAGAGCCTGACGTTCCATGAAAGCATATGATTCAGAATGATATGCAtttcagaaatcaaaacttTCTTCCCAAAGGAGAAAAAGCTATAACTGAATCTCCTCTGAAGAcctagattaaaaataaaattttgcacATAAAACGAACATTGATTTGCATTAGGTTTAACATAAACTGATACGCTTAATGTGACGTGTGTTTTGAAATCGTGCATAAATGAAACCACTAAGATTTAATTGATTTCACAGTGGTCAGATTTATGCTGATTctaaacaaatttaattaataaaaaattaataaatcaataaattaaatagatgcaggtatttaataataaaataataacggAGTGCAGGTTTCTGAGCCATTTCATTTATGCATGTCtggcaaatatttaaatacacacattaagtttattagtttttgtcaGAACTGCGTACCCCAATGAACGGAAGTTTTATAagcaatacataaatattatatgcttaaaaaatagaaatcggTATTTTGGATTTCAGACTGATTAATACGTTTTCACGTGATTGACCAGAGGAGTCAGAACAGGTCAAAATGTTCATGCAAAGAAAATTACGTTtgttatttatgcaaaaaattataCCCGGAGCTCAGGGAAATTTTTATGTatgatatgacccctttaacccCATGAGAGTGTCTTTTTAAGACTAATCTGTCCCTCTAAATATTTCTGTAGTTGTTACGTCCACGAAGGACCGCGTCCATGTGTGTGTCAGGTATAACACAGTACGATTACTACAGGGAACACAGAAACAGTAATGCACTGAAATCAGAAAACTGACAGTGAGCGAagcaaaaaagtattattttacatataaatgaaatgcaagtCATACATTGAGTTTGAAATCGAGTTCAGTCGTGGATAGTGTATATGACTGAatccttttgtgtttgtgtggtgcaaaataatgtgaaaaatctCATGTTGAAGTAACGTGTTTGAGATGTAGACCATTCCATGTAGTAACGTGAAGTTAACTGGAGTTCATCAGGTCATCTGCTCAGATTGATCTTGTTTGTAACAACTCAACCACAATAAATGTCACTCTTGCCACCTTCTGATTGGTCTGGtgtgtaaaaatgaatgtaGATGTAGCTCTATTGAACAGATGAGAGGCTTTCACCTTTAGCTAAAAAATATGGAACATTACCTTGAGTGTATAATAGCTTGGAATAGAAATGCCATGATAAATGAATATGATTATTATGGGTAGTTATAAAATAAGTGTCTGTTGTCACCATTTTTTTAGTCATGTTTTTCCTGTGTCCTGTGATGTGAcgattgaataataaaaaaaatgctaataa

Function

GO:

id name namespace
GO:0043065 positive regulation of apoptotic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005740 mitochondrial envelope cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60812 lncRNA downstream 322893 31977714 ~ 31978466 (-) True G41065
TU60811 lncRNA downstream 324308 31975936 ~ 31977051 (-) True G41064
TU60785 lncRNA downstream 396572 31723742 ~ 31904787 (-) True G41047
TU60963 lncRNA upstream 75987 32386127 ~ 32386472 (-) True G41177
TU60989 lncRNA upstream 128479 32438619 ~ 32439145 (-) True G41198
TU60982 lncRNA upstream 134142 32444282 ~ 32445281 (-) True G41191
TU61018 lncRNA upstream 167122 32477262 ~ 32477840 (-) True G41216
TU61019 lncRNA upstream 170215 32480355 ~ 32480713 (-) True G41217
XM_043240763.1 mRNA downstream 7583 32214031 ~ 32293776 (-) False LOC122346090
XM_043240762.1 mRNA downstream 7584 32214031 ~ 32293775 (-) False LOC122346090
XM_043239627.1 mRNA downstream 127295 32113896 ~ 32174064 (-) True tnca
XM_043239628.1 mRNA downstream 127943 32113896 ~ 32173416 (-) False tnca
XM_043239629.1 mRNA downstream 127968 32113896 ~ 32173391 (-) False tnca
XM_043240757.1 mRNA upstream 2659 32312799 ~ 32314631 (-) True LOC122346085
XM_043240476.1 mRNA upstream 5547 32315687 ~ 32342744 (-) True LOC122345937
XM_043238594.1 mRNA upstream 106085 32416225 ~ 32421598 (-) True ostf1
XM_043239474.1 mRNA upstream 149318 32459458 ~ 32464623 (-) True LOC122345374
XM_043238262.1 mRNA upstream 328120 32638260 ~ 32681474 (-) False bmpr1ba
XR_006251085.1 other downstream 7577 32214276 ~ 32293782 (-) False LOC122346090
XR_006251086.1 other downstream 7577 32214292 ~ 32293782 (-) False LOC122346090
XR_006251087.1 other downstream 7577 32214293 ~ 32293782 (-) True LOC122346090
XR_006251089.1 other downstream 7577 32214295 ~ 32293782 (-) False LOC122346090
XR_006251088.1 other downstream 7577 32253521 ~ 32293782 (-) False LOC122346090
TU61129 other upstream 434027 32744167 ~ 32745881 (-) False LOC122345737

Expression Profile