RNA id: XM_043240810.1


Basic Information

Item Value
RNA id XM_043240810.1
length 4372
RNA type mRNA
GC content 0.50
exon number 21
gene id kiaa0825
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 18535605 ~ 18648678 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCAGAATCATAACAGTGCGTCAACCACACGTGTTTATAAACAAACGGGTGAGACGGCTGAACAGTTCATATATTCGTCCTCGTAAGCGAGCTTGAAAGCATGTTATTTATCCATCAGAAAGCCTTTTAATCTTATACGACACTTTTTGTCTGCAATCTTATATTGTGGATCGATATAAATGACTGAAACAGTATTTCTCACACTCCCATTAAAACACTCGCAGTTTCCTTCCATTAGTGCTGTCTCAGAACGTGAGTGAAAGGTAAAGATTTGAGAAGAAATGTACCTGACAATTCTACTTGGATTTTAGCCCTAGTCCTTCATTGCTGTTGAAGTTAATGTGATGAAGAGCCACTGAAACCACAGCGTGAAAAGGGAAGAGATGGACTGGCAAGGTGACTTCCTGCATGACCATGCATTTGTGGAGCTGCAGTTGGAAGGAATCCCCAGTGAGGTGGACATCCAGAACCTGatcagagacacagaggagaaacTCAGACTTAATGCCTGCAGTATTGAACAGAACCTGAAAGAACTGCAGGCTAAGGTTGGTGAGGCCAGTAGTGGAGAGAGAGTTCCCAGTCCAATAGAGTGCCTCCAGTGGTTCAGTCAACGCAAACTGAGCATCCTAAAACCAGTGGCTACAGGACACCAACAGCTTCTGGACTTCCTCCGAGCCTTGGAAAACTTGCTAAAGGCAGGGGAGGCTTGTGAAGAGTCTGTTCTGCAGTTACTACTGAAGATCTCTTCTCAATGTGGTGTTGCTTTCCCCACTTCCTGCCCTGTATCTGACGAAGAGCCCTCCTCATCTCCTAACTTATCCATGCCATGTGATGACCTTGCTCTGGAAGTCCAGAAGGCATGGGATGATGTTCGTTTCTCATTGCGGAACCACTTACTTGGCAAACTTCAGATGATGACTGAACCTAGCCAAACTGAGGCAGAACTTGGTGTTGGGACCAAGGTTTCTCAAAGGATCTTCTACCTTCAACAGCTGTTATTCCTCTACCCTCAAACAAAGGTCTTCAGCTGGTACCAACACCTTCAGATCAAGTCTGTTATCGGTGTTCTCCAAAACTGCCAAAGCTCCATCCCGGGTGGGGAGAAGGGCTTTGACAGATTGAGTCTGGGCTTTCAAACTGCCTCTCCAGCTCTTTGCTCAATGCTTAGAAAGGAAATTCATGTACTTAACAGAGTTGCAGAACCACATAACATCATTGCCTTCCTCAACCATGTCTACCTGAACACAGTGGCACAGGAACTAGGTGTGCTGATGGACAAGGAGATCGAGACtgcactgaaagacaacacCGTGCACAGCATGAAAGGAGGCAAGAAGTCCAGCAAGAAGTCTGCAGTAGCTCCTCAGGATCCTTCCCAGAGTGGACGAAGCTTCAGCCTTACTTCCCATCAGCTCAGGTGCTTGACCCAGTTGACCAACACCTTTCTGGAGCTGGAACAAACTGTAGAGGACTTGGCAACCCATCTGGGTTTCCTTAATTGCGCTGGAGAATCAGTATGCAGCGGCAAAGGGGTCCTGAAGAAGGTCAGGGATCATATGGAGGTGACGGCAGCAGAAAACAAAGCCGCTACTGATCTTGTGCTGCAGAGCACAAAGGTGGTGTGCCTTGAGTTTGGTTGGAGGGCTGCATTCAGAGAGCTTGTTCCTCAGATGGCTCATTGTGTGAAGGTGGTGCTGGATGATGTTTGCAGTAAGaacctgcagcaggaggaagcCACACATGCATTGGGCTCCGCCAACATCCCCCTCACCCCTGTTACCCGTAGTCATGGCCCAGAAAGAGACTCTCCCAGGATGGTGGCCAAGTTCTGCGCAGATGTTGTGGAGCAGATGGATGCTTTTCTCCCTCTTGCTGTGGCGTTTAGAGAGAACGGCCTACTGCCCGTGTGCTCCAGCTATGTGGAGGTGTGTGGCCAGGTGACTAATTTCCTGCTGACCAGACTGGAGGAGAGGGCAGGGGAAGTGCCGGCCTCAGCTCCCTTCAAGAACATGCCTATTCTGATGGCCACTAGTGTCTACATCTACCAGACACTCGCACGCTATGAAAGTCAGCTCAGAGACTCCACGCGCATGCCTCTAACTCTGCTGCCCATTCAGAGAAGCCAGGATGTGATGGCAGCCCTGCACGATCACCTGACCAGCTACTGCGTCCATGTGTGTGCCTCTAGTATACTACAGGATGCCGAGAGCCACTACTGGAGTGACCCCAACCCGTTTTACGAGggtgaAAGGTGTTCTTTCTCCATCCAGATGTGGCACTATTTTCTCGCAGGCCTGCGCAGTGACCTTTGGGGTGCAGTTGCCCCCTTGCAGGCCCGGCAGACCCTGGCCCAGGTGCTGTATGAGACCCTGGAGGTCTTAGTTCAGAGGTACTCAAGAGCGCGACCTTCCTACAAAAGACTCTCCCAAATCAGGACTGATATTACAGCCATTTTGCTGTGTGTGGAGCATCTTATGTGGAGtttgtgtgactctgtggaggaGTTGCTAAGGCCTGATGCAGCTTGTGGATCTTGGATGTGGTCCATACACAGCCTGTGTAATCAGCTGCTGACCGTACTGATCGTCCTTACATCACCTCTAGCAGAGCTGCACGGGGTTTTTCAAGTAGGCTGTGGTGAAGGAGGCAGCAGAACTGCAAAGTTTCCAGAGGAAATGAACAGTCATGAAACAAAGTGGCTGATTGTTATCAACCCAAAACTGTTCACAGAGGAGCTGCTGAGGGATTTTCCAGCTTGTGATGGATCTTCTTTATGTCTGTTTGAGCTACTGGTGTCTGAACCCTGTTATAATCCAGCTGTACTTCTGCGGACCATCCTTCACAAGGACTGCTTCCTGCTACAGATCATCATCTCATACTCATGTCTCTGTGTGGACAGAGAAACAGAGGTATCCCATGAAGCTCACACAGCAGCTGCAGAGTTTTTGGAAGCTGTTTTTTCCATCCTGTCCTGCCTCAACTCCCTCCCCAGGGCTTTAACTCGAGCGCTAGAGGGCTACCTGGACCAGAGACGCCTTTGGGAGCACTTTTACAACTTAGCAGacTCCAGTAAAGAGGAACCAAGcttgtttaaaaacatcagATCCATTGTTTGTGAATCAACCAGCAAACTTTTGGTCCACCTTGTTAGCATGATGCAGGCCTATAAAGACCAGTCTGGACCTGTGGTTGGTCAACACCTACCTGAAAATGTCCTAAGCAAAATTCCAAAAGAGTGGAACTACATTCCACAAGATGACAAGTTTCATGAAACCAGCCAGAACAACATGGCCATTCAAGCCCTCTCTTTCATCTTCACCAACCTTCCATCAACCATAGCCTCTCTACCACTGCCTGTACGCTTCCTGTTTACTGTGGCAGAGAAAAAGCTTTCCCAGCATGCCAGACAGCTGAGGTCTACCGGCCTGCTCCTCTGGGTCATATTGGTCAGCCTCTGTCAGGATCTAGAAAATGGGGACAACCTGGAGCTCTTGTCTGGGCGGCCCATGGAGAGAGGTGCCAAGGATAGGCTGTGTCTGCTATCAGAATGTCTGCTGGTCAGTCTGGGCCAGGAGAAGGGCATTCCCAAGCCTCTGGTCCATAAGGTGCTTCAGGGCCTGGAAGAGAAGAGGCCCAAATGGACCACCATGCAGCTGCAGAAGGCACGGAAGCTTTGCTGTGATAGTGTGTTTGAGCGTGTGGAAAGCGGCCCGGCGCAGGATAGAGGTGGGCCCGTGGAACTGACTGAGCATAAAATAAGGCAGTTGCTGCTGGAGCTGTGCCATAGAGCAGGTGGCAGCCAGCACCTCCGGCAAATCCATCACAGCATCCAGCTCAATGAGGGTTTACTGAGGTCCGTCTTAACGCCACATGAAGAGACGCATCCACTTCCGGACTCCCCTTTGGGACCTGTCATATTCTCCTCTGAAGCAACAAGCAGCCAAAACCAGTGTAAAACCCAGTTCAACCCCCTCACGGAGTGCAATTCTATCGGCCGTAACAAGTTCGATCAGGCTGCTATGGGTGAGAGGGAGTGGGATTGGGCCCAACTGCTGCCAGCCTATCGGAGCATGAGTCAGGTGACCTTCACGACGCTGCTTGCTAACAGGTGGGAGATGCAAGATGCTGCGGCgctggaggaggaagagaagatTTTAGTGGATCAGTTTAAGAAAGTATACTTCGACGACAGAGAAACATAGTGAAGTCCCTGTGACTGTATAGCAGAAGAACCAAATGACCAATGTAAAAAGTGCATGTAGCTGCTGAGAACATTGTTGAAAGTGGATGTTCTCTGGATGTGAAATTACAGCTGTGGATgagtaataaacaaaaaaacactgtgaacTATAATAAAGCTCAAGGTTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU55429 lncRNA downstream 143957 18373317 ~ 18391648 (-) True G37571
TU55428 lncRNA downstream 162355 18372208 ~ 18373250 (-) True G37570
TU55427 lncRNA downstream 164788 18370523 ~ 18370817 (-) True G37569
TU55419 lncRNA downstream 170138 18362413 ~ 18365467 (-) True G37565
TU55417 lncRNA downstream 174444 18353591 ~ 18361161 (-) False LOC122345727
TU55526 lncRNA upstream 164886 18813564 ~ 18813771 (-) True G37637
TU55695 lncRNA upstream 420236 19068914 ~ 19075774 (-) False G37757
TU55692 lncRNA upstream 421824 19070502 ~ 19075774 (-) True G37757
TU55715 lncRNA upstream 474347 19123025 ~ 19123308 (-) True G37774
TU55717 lncRNA upstream 484135 19132813 ~ 19133144 (-) True G37776
XM_043240144.1 mRNA downstream 1098 18385973 ~ 18534507 (-) True fam172a
XM_043240145.1 mRNA downstream 1219 18385973 ~ 18534386 (-) False fam172a
XM_043240146.1 mRNA downstream 1389 18385973 ~ 18534216 (-) False fam172a
XM_043240147.1 mRNA downstream 1608 18385973 ~ 18533997 (-) False fam172a
XM_043240295.1 mRNA downstream 489218 18043514 ~ 18046387 (-) True LOC122345814
XM_043240778.1 mRNA upstream 30030 18678708 ~ 18805862 (-) True mctp1a
XM_043240783.1 mRNA upstream 30030 18678708 ~ 18805708 (-) False mctp1a
XM_043240780.1 mRNA upstream 30030 18678708 ~ 18805708 (-) False mctp1a
XM_043240782.1 mRNA upstream 30030 18678708 ~ 18805708 (-) False mctp1a
XM_043240781.1 mRNA upstream 30030 18678708 ~ 18805708 (-) False mctp1a
TU54999 other downstream 1822438 16687260 ~ 16713167 (-) True G37277
TU54996 other downstream 1822438 16687415 ~ 16713167 (-) False G37277
TU54976 other downstream 1902484 16596855 ~ 16633121 (-) True G37258
TU54936 other downstream 2157110 16376508 ~ 16378495 (-) False LOC122344728
TU54865 other downstream 2278866 16254149 ~ 16256739 (-) False LOC122344710
XR_006251078.1 other upstream 1218708 19867386 ~ 19935576 (-) False kcnt1b
XR_006251077.1 other upstream 1218708 19867386 ~ 19935576 (-) False kcnt1b
XR_006251079.1 other upstream 1220136 19868814 ~ 19935576 (-) False kcnt1b
TU56161 other upstream 1402981 20051659 ~ 20055798 (-) True G38058
TU56325 other upstream 1476911 20125589 ~ 20127390 (-) True G38140

Expression Profile