RNA id: XR_006250922.1


Basic Information

Item Value
RNA id XR_006250922.1
length 375
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id LOC122344702
representative True

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30974318 ~ 30974883 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGAGAACAGAGTGACCAGCTGCCGCTTGGCGAAGAACTCGTACCCGTCCTCCACCACCTGACGCacacaggaacaggaagttcaaCTCATATCGGAAAcattaaaccaaacaaaaacgaagaacacacacagactcagagTCCTGCTGCCATCTAATGAGGGACACGTGGAACTGCGTCCAAACTACATTCTACAGAGAGCTTCGATTTGGAACAACTTGGATTTATGGCTTTGATTTTCGAGCGGATTTAGAGTTCAGTGTGTTTCAGAAAAGATATATTTCTGTAATTAGGAAATCGTGTATTAATTGCTTCCTCGTTTTGGTTAAAGCCTGTGTTATTTcaagaaaaactaattaaaccTGGTATTTCCCGT

Function

GO:

id name namespace
GO:0004359 glutaminase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250921.1 lncRNA downstream 10811 30959444 ~ 30963507 (-) True LOC122344701
TU60350 lncRNA downstream 49121 30920851 ~ 30925197 (-) False G40760
TU60352 lncRNA downstream 49121 30920851 ~ 30925197 (-) True G40760
XR_006250920.1 lncRNA downstream 49121 30921178 ~ 30925197 (-) True LOC122344700
TU60357 lncRNA downstream 54718 30888340 ~ 30919600 (-) False G40762
TU60379 lncRNA upstream 2726 30977609 ~ 30978322 (-) True G40782
TU60395 lncRNA upstream 63522 31038405 ~ 31039457 (-) True G40794
TU60399 lncRNA upstream 113309 31088192 ~ 31094923 (-) True G40798
TU60429 lncRNA upstream 245934 31220817 ~ 31222194 (-) True LOC122344940
XR_006250951.1 lncRNA upstream 246001 31220884 ~ 31222257 (-) False LOC122344940
XM_043238243.1 mRNA downstream 22830 30942514 ~ 30951488 (-) True cux2a
XM_043238238.1 mRNA downstream 32436 30920817 ~ 30941882 (-) True LOC122344688
XM_043238521.1 mRNA downstream 138584 30831189 ~ 30835734 (-) True rabepk
XM_043238534.1 mRNA downstream 204411 30765631 ~ 30769907 (-) True LOC122344907
XM_043240565.1 mRNA downstream 219378 30734104 ~ 30754940 (-) True golga2
XM_043238956.1 mRNA upstream 3710 30978593 ~ 31052589 (-) True mcc
XM_043238245.1 mRNA upstream 79041 31053924 ~ 31064355 (-) True rcl1
XM_043238241.1 mRNA upstream 99160 31074043 ~ 31081265 (-) True LOC122344691
XM_043238248.1 mRNA upstream 133840 31108723 ~ 31112733 (-) True rplp0
XM_043238526.1 mRNA upstream 167694 31142577 ~ 31155113 (-) True gusb
TU60335 other downstream 147960 30819515 ~ 30826358 (-) True G40752
TU60340 other downstream 147960 30819515 ~ 30826358 (-) False G40752
TU60266 other downstream 181599 30789633 ~ 30792719 (-) True G40713
TU60256 other downstream 277630 30631028 ~ 30696688 (-) False G40711
XR_006251005.1 other upstream 727570 31702453 ~ 31711737 (-) True apooa
TU60769 other upstream 746387 31721270 ~ 31722906 (-) True G41035
XR_006251008.1 other upstream 1147401 32122284 ~ 32173823 (-) False tnca
XR_006251085.1 other upstream 1239393 32214276 ~ 32293782 (-) False LOC122346090
XR_006251086.1 other upstream 1239409 32214292 ~ 32293782 (-) False LOC122346090

Expression Profile