Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006250952.1 |
| length | 280 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC122344941 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056703.1 |
| NCBI id | CM032072.1 |
| chromosome length | 32833783 |
| location | 26372619 ~ 26373822 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58531 | lncRNA | downstream | 218916 | 26153465 ~ 26153703 (-) | True | G39585 |
| TU58525 | lncRNA | downstream | 253536 | 26118474 ~ 26119083 (-) | True | G39579 |
| TU58520 | lncRNA | downstream | 589028 | 25782979 ~ 25783591 (-) | True | G39574 |
| TU58518 | lncRNA | downstream | 644149 | 25728237 ~ 25728470 (-) | True | G39572 |
| TU58435 | lncRNA | downstream | 789605 | 25582339 ~ 25583014 (-) | True | G39514 |
| TU58747 | lncRNA | upstream | 502768 | 26876590 ~ 26883175 (-) | True | G39712 |
| TU58749 | lncRNA | upstream | 502768 | 26876590 ~ 26883175 (-) | False | G39712 |
| TU58799 | lncRNA | upstream | 708179 | 27082001 ~ 27084786 (-) | True | G39738 |
| TU58800 | lncRNA | upstream | 725993 | 27099815 ~ 27107385 (-) | True | LOC122345426 |
| XR_006250928.1 | lncRNA | upstream | 742145 | 27115967 ~ 27146962 (-) | True | LOC122344810 |
| XM_043240553.1 | mRNA | downstream | 663940 | 25655507 ~ 25708679 (-) | False | kntc1 |
| XM_043240554.1 | mRNA | downstream | 663940 | 25655507 ~ 25708679 (-) | False | kntc1 |
| XM_043240552.1 | mRNA | downstream | 663940 | 25655507 ~ 25708679 (-) | True | kntc1 |
| XM_043240061.1 | mRNA | downstream | 721611 | 25618111 ~ 25651008 (-) | True | hip1rb |
| XM_043238566.1 | mRNA | downstream | 804005 | 25563039 ~ 25568614 (-) | False | LOC122344921 |
| XM_043238251.1 | mRNA | upstream | 158513 | 26532335 ~ 26544513 (-) | True | LOC122344705 |
| XM_043238939.1 | mRNA | upstream | 179884 | 26553706 ~ 26566423 (-) | True | LOC122345107 |
| XM_043240170.1 | mRNA | upstream | 217103 | 26590925 ~ 26610395 (-) | True | LOC122345741 |
| XM_043238546.1 | mRNA | upstream | 241320 | 26615142 ~ 26625016 (-) | False | kat5b |
| XM_043238543.1 | mRNA | upstream | 241320 | 26615142 ~ 26625008 (-) | True | kat5b |
| unassigned_transcript_1081 | other | downstream | 261217 | 26111332 ~ 26111402 (-) | True | trnag-gcc_64 |
| unassigned_transcript_1080 | other | downstream | 263049 | 26109500 ~ 26109570 (-) | True | trnag-gcc_63 |
| unassigned_transcript_1079 | other | downstream | 271210 | 26101339 ~ 26101409 (-) | True | trnag-gcc_62 |
| unassigned_transcript_1078 | other | downstream | 280623 | 26091926 ~ 26091996 (-) | True | trnag-gcc_61 |
| unassigned_transcript_1077 | other | downstream | 282831 | 26089718 ~ 26089788 (-) | True | trnag-gcc_60 |
| TU59072 | other | upstream | 1009099 | 27382921 ~ 27398720 (-) | True | isca1 |
| TU59237 | other | upstream | 1515301 | 27889123 ~ 27895454 (-) | True | LOC122344874 |
| TU59335 | other | upstream | 1882006 | 28255828 ~ 28264704 (-) | True | G40080 |
| TU59455 | other | upstream | 3086763 | 29460585 ~ 29490204 (-) | True | G40182 |
| XR_006251000.1 | other | upstream | 3243177 | 29616999 ~ 29655061 (-) | False | eng |
