RNA id: unassigned_transcript_1076



Basic Information


Item Value
RNA id unassigned_transcript_1076
length 71
RNA type tRNA
GC content 0.63
exon number 1
gene id trnag-gcc_59
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 26080123 ~ 26080193 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcattggtggttcagtggtagaattctcgcctgccgcgcgggagacccgggttcgattcccggccgtagca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU58520 lncRNA downstream 296532 25782979 ~ 25783591 (-) True G39574
TU58518 lncRNA downstream 351653 25728237 ~ 25728470 (-) True G39572
TU58435 lncRNA downstream 497109 25582339 ~ 25583014 (-) True G39514
TU58427 lncRNA downstream 520905 25558875 ~ 25559218 (-) True G39506
TU58424 lncRNA downstream 522601 25557296 ~ 25557522 (-) True G39503
TU58525 lncRNA upstream 38281 26118474 ~ 26119083 (-) True G39579
TU58531 lncRNA upstream 73272 26153465 ~ 26153703 (-) True G39585
XR_006250952.1 lncRNA upstream 292426 26372619 ~ 26373822 (-) True LOC122344941
TU58747 lncRNA upstream 796397 26876590 ~ 26883175 (-) True G39712
TU58749 lncRNA upstream 796397 26876590 ~ 26883175 (-) False G39712
XM_043240553.1 mRNA downstream 371444 25655507 ~ 25708679 (-) False kntc1
XM_043240554.1 mRNA downstream 371444 25655507 ~ 25708679 (-) False kntc1
XM_043240552.1 mRNA downstream 371444 25655507 ~ 25708679 (-) True kntc1
XM_043240061.1 mRNA downstream 429115 25618111 ~ 25651008 (-) True hip1rb
XM_043238566.1 mRNA downstream 511509 25563039 ~ 25568614 (-) False LOC122344921
XM_043238251.1 mRNA upstream 452142 26532335 ~ 26544513 (-) True LOC122344705
XM_043238939.1 mRNA upstream 473513 26553706 ~ 26566423 (-) True LOC122345107
XM_043240170.1 mRNA upstream 510732 26590925 ~ 26610395 (-) True LOC122345741
XM_043238546.1 mRNA upstream 534949 26615142 ~ 26625016 (-) False kat5b
XM_043238543.1 mRNA upstream 534949 26615142 ~ 26625008 (-) True kat5b
unassigned_transcript_1075 other downstream 22000 26058053 ~ 26058123 (-) True trnag-gcc_58
unassigned_transcript_1074 other downstream 29374 26050679 ~ 26050749 (-) True trnag-gcc_57
unassigned_transcript_1070 other downstream 37793 26042260 ~ 26042330 (-) True trnag-gcc_56
unassigned_transcript_1067 other downstream 43447 26036606 ~ 26036676 (-) True trnag-gcc_55
unassigned_transcript_1064 other downstream 45633 26034420 ~ 26034490 (-) True trnag-gcc_54
unassigned_transcript_1077 other upstream 9525 26089718 ~ 26089788 (-) True trnag-gcc_60
unassigned_transcript_1078 other upstream 11733 26091926 ~ 26091996 (-) True trnag-gcc_61
unassigned_transcript_1079 other upstream 21146 26101339 ~ 26101409 (-) True trnag-gcc_62
unassigned_transcript_1080 other upstream 29307 26109500 ~ 26109570 (-) True trnag-gcc_63
unassigned_transcript_1081 other upstream 31139 26111332 ~ 26111402 (-) True trnag-gcc_64