RNA id: unassigned_transcript_955



Basic Information


Item Value
RNA id unassigned_transcript_955
length 72
RNA type tRNA
GC content 0.61
exon number 1
gene id trnap-agg_13
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13375629 ~ 13375700 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU53349 lncRNA downstream 1874 13370210 ~ 13373755 (-) True G36200
TU53204 lncRNA downstream 52407 13322931 ~ 13323222 (-) True G36108
TU53200 lncRNA downstream 58167 13317235 ~ 13317462 (-) True G36104
TU53144 lncRNA downstream 266681 13108699 ~ 13108948 (-) True G36063
TU53126 lncRNA downstream 318924 13055569 ~ 13056705 (-) True G36048
TU53365 lncRNA upstream 4599 13380299 ~ 13438104 (-) True G36213
TU53392 lncRNA upstream 36944 13412644 ~ 13414387 (-) True G36230
TU53391 lncRNA upstream 39176 13414876 ~ 13418962 (-) True G36229
TU53385 lncRNA upstream 70921 13446621 ~ 13447119 (-) True G36227
TU53376 lncRNA upstream 186954 13562654 ~ 13563898 (-) True G36218
XM_043239540.1 mRNA downstream 71933 13270402 ~ 13303696 (-) True efnb1
XM_043238349.1 mRNA downstream 225091 13118367 ~ 13150538 (-) True rxfp2l
XM_043239671.1 mRNA downstream 324851 13020346 ~ 13050778 (-) False ophn1
XM_043239669.1 mRNA downstream 324851 13020346 ~ 13050778 (-) True ophn1
XM_043239670.1 mRNA downstream 324851 13030144 ~ 13050778 (-) False ophn1
XM_043240077.1 mRNA upstream 12312 13388012 ~ 13391957 (-) False zgc:158432
XM_043240076.1 mRNA upstream 12312 13388012 ~ 13391957 (-) True zgc:158432
XM_043239924.1 mRNA upstream 16956 13392656 ~ 13407947 (-) False taf1
XM_043239921.1 mRNA upstream 16956 13392656 ~ 13407947 (-) False taf1
XM_043239922.1 mRNA upstream 16956 13392656 ~ 13407947 (-) False taf1
TU53125 other downstream 320772 13053844 ~ 13054857 (-) True G36047
TU52956 other downstream 869671 12501914 ~ 12505958 (-) True G35936
TU52745 other downstream 1055944 12317803 ~ 12319685 (-) True G35825
TU52701 other downstream 1206302 12165410 ~ 12169327 (-) False sh2d1aa
TU52507 other downstream 1559819 11801314 ~ 11815810 (-) False msna
TU53374 other upstream 203361 13579061 ~ 13582241 (-) True h3f3c
XR_006250976.1 other upstream 283377 13659077 ~ 13699226 (-) False lrch2
XR_006250977.1 other upstream 284274 13659974 ~ 13699226 (-) False lrch2
TU53475 other upstream 341424 13717124 ~ 13718543 (-) True G36298
TU53529 other upstream 442042 13817742 ~ 13818942 (-) True G36336