RNA id: unassigned_transcript_956



Basic Information


Item Value
RNA id unassigned_transcript_956
length 73
RNA type tRNA
GC content 0.60
exon number 1
gene id trnam-cau_26
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13838890 ~ 13838962 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCTCGTTGGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGAGCCTCACACGGGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU53531 lncRNA downstream 19556 13818248 ~ 13819334 (-) True G36337
TU53473 lncRNA downstream 125470 13712680 ~ 13713420 (-) True G36297
TU53382 lncRNA downstream 126931 13708100 ~ 13711959 (-) True G36224
TU53457 lncRNA downstream 195565 13642526 ~ 13643325 (-) False LOC122345175
XR_006250978.1 lncRNA downstream 195576 13619026 ~ 13643314 (-) True LOC122345175
TU53602 lncRNA upstream 136390 13975352 ~ 13977070 (-) False G36385
TU53605 lncRNA upstream 136390 13975352 ~ 13977070 (-) True G36385
TU53610 lncRNA upstream 136390 13975352 ~ 13977070 (-) False G36385
TU53878 lncRNA upstream 437134 14276096 ~ 14310067 (-) True G36541
TU53857 lncRNA upstream 440712 14279674 ~ 14282516 (-) True znhit1
XM_043238578.1 mRNA downstream 106407 13720781 ~ 13732483 (-) True wdr44
XM_043239033.1 mRNA downstream 139674 13654294 ~ 13699216 (-) True lrch2
XM_043240423.1 mRNA upstream 6441 13845403 ~ 13848070 (-) True LOC122345901
XM_043240379.1 mRNA upstream 99679 13938641 ~ 13940216 (-) True chrm1b
XM_043239846.1 mRNA upstream 126193 13965155 ~ 13967827 (-) True LOC122345582
XM_043239548.1 mRNA upstream 148527 13987489 ~ 14000256 (-) True arhgap35b
XM_043239554.1 mRNA upstream 161597 14000559 ~ 14002075 (-) True fxyd2
TU53529 other downstream 19948 13817742 ~ 13818942 (-) True G36336
TU53475 other downstream 120347 13717124 ~ 13718543 (-) True G36298
XR_006250976.1 other downstream 139664 13659077 ~ 13699226 (-) False lrch2
XR_006250977.1 other downstream 139664 13659974 ~ 13699226 (-) False lrch2
TU53374 other downstream 256649 13579061 ~ 13582241 (-) True h3f3c
unassigned_transcript_957 other upstream 5925 13844887 ~ 13844959 (-) True trnam-cau_27
TU53547 other upstream 7416 13846378 ~ 13848059 (-) False LOC122345901
XR_006251003.1 other upstream 162972 14001934 ~ 14009536 (-) False tmprss13b
XR_006251004.1 other upstream 164252 14003214 ~ 14009536 (-) False tmprss13b
XR_006250968.1 other upstream 206515 14045477 ~ 14056705 (-) False rnf214