RNA id: unassigned_transcript_957



Basic Information


Item Value
RNA id unassigned_transcript_957
length 73
RNA type tRNA
GC content 0.60
exon number 1
gene id trnam-cau_27
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13844887 ~ 13844959 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCTCGTTGGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGAGCCTCACACGGGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU53531 lncRNA downstream 25553 13818248 ~ 13819334 (-) True G36337
TU53473 lncRNA downstream 131467 13712680 ~ 13713420 (-) True G36297
TU53382 lncRNA downstream 132928 13708100 ~ 13711959 (-) True G36224
TU53457 lncRNA downstream 201562 13642526 ~ 13643325 (-) False LOC122345175
TU53448 lncRNA downstream 207564 13633670 ~ 13637323 (-) True G36279
TU53602 lncRNA upstream 130393 13975352 ~ 13977070 (-) False G36385
TU53605 lncRNA upstream 130393 13975352 ~ 13977070 (-) True G36385
TU53610 lncRNA upstream 130393 13975352 ~ 13977070 (-) False G36385
TU53878 lncRNA upstream 431137 14276096 ~ 14310067 (-) True G36541
TU53857 lncRNA upstream 434715 14279674 ~ 14282516 (-) True znhit1
XM_043238578.1 mRNA downstream 112404 13720781 ~ 13732483 (-) True wdr44
XM_043239033.1 mRNA downstream 145671 13654294 ~ 13699216 (-) True lrch2
XM_043240423.1 mRNA upstream 444 13845403 ~ 13848070 (-) True LOC122345901
XM_043240379.1 mRNA upstream 93682 13938641 ~ 13940216 (-) True chrm1b
XM_043239846.1 mRNA upstream 120196 13965155 ~ 13967827 (-) True LOC122345582
XM_043239548.1 mRNA upstream 142530 13987489 ~ 14000256 (-) True arhgap35b
XM_043239554.1 mRNA upstream 155600 14000559 ~ 14002075 (-) True fxyd2
unassigned_transcript_956 other downstream 5925 13838890 ~ 13838962 (-) True trnam-cau_26
TU53529 other downstream 25945 13817742 ~ 13818942 (-) True G36336
TU53475 other downstream 126344 13717124 ~ 13718543 (-) True G36298
XR_006250976.1 other downstream 145661 13659077 ~ 13699226 (-) False lrch2
XR_006250977.1 other downstream 145661 13659974 ~ 13699226 (-) False lrch2
TU53547 other upstream 1419 13846378 ~ 13848059 (-) False LOC122345901
XR_006251003.1 other upstream 156975 14001934 ~ 14009536 (-) False tmprss13b
XR_006251004.1 other upstream 158255 14003214 ~ 14009536 (-) False tmprss13b
XR_006250968.1 other upstream 200518 14045477 ~ 14056705 (-) False rnf214
XR_006250967.1 other upstream 200518 14045477 ~ 14056705 (-) True rnf214