RNA id: unassigned_transcript_963



Basic Information


Item Value
RNA id unassigned_transcript_963
length 72
RNA type tRNA
GC content 0.61
exon number 1
gene id trnak-cuu_6
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24926980 ~ 24927051 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCCgctagctcagtcggtagagcatgagACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU58279 lncRNA downstream 2033 24924707 ~ 24924947 (-) True G39366
TU58278 lncRNA downstream 14041 24912646 ~ 24912939 (-) True G39365
TU58270 lncRNA downstream 63789 24861943 ~ 24863191 (-) True G39357
TU58269 lncRNA downstream 80617 24840745 ~ 24846363 (-) True G39356
TU58223 lncRNA downstream 168353 24754204 ~ 24758627 (-) True LOC122345923
TU58288 lncRNA upstream 89510 25016561 ~ 25016841 (-) True G39375
TU58290 lncRNA upstream 92198 25019249 ~ 25019491 (-) True G39377
TU58301 lncRNA upstream 124130 25051181 ~ 25051518 (-) True G39384
TU58318 lncRNA upstream 248257 25175308 ~ 25176349 (-) True G39401
TU58377 lncRNA upstream 370825 25297876 ~ 25299229 (-) True G39456
XM_043240627.1 mRNA downstream 23691 24814609 ~ 24903289 (-) False LOC122346005
XM_043240626.1 mRNA downstream 23691 24814609 ~ 24903289 (-) True LOC122346005
XM_043240635.1 mRNA downstream 144332 24759478 ~ 24782648 (-) False taf6
XM_043240636.1 mRNA downstream 144332 24759478 ~ 24782648 (-) True taf6
XM_043240457.1 mRNA downstream 168312 24754202 ~ 24758668 (-) False LOC122345923
XM_043239176.1 mRNA upstream 304184 25231235 ~ 25263128 (-) False zfpl1
XM_043239175.1 mRNA upstream 304184 25231235 ~ 25263124 (-) True zfpl1
XM_043240265.1 mRNA upstream 376424 25303475 ~ 25446662 (-) False LOC122345796
XM_043240264.1 mRNA upstream 376424 25303475 ~ 25446661 (-) True LOC122345796
XM_043240267.1 mRNA upstream 376424 25303475 ~ 25446660 (-) False LOC122345796
unassigned_transcript_962 other downstream 2760 24924148 ~ 24924220 (-) True trnak-cuu_5
unassigned_transcript_961 other downstream 8904 24918005 ~ 24918076 (-) True trnak-cuu_4
unassigned_transcript_960 other downstream 9087 24917820 ~ 24917893 (-) True trnan-guu_1
XR_006250980.1 other downstream 332864 24588028 ~ 24594116 (-) False anapc2
TU57904 other downstream 726484 24197705 ~ 24200496 (-) True G39113
unassigned_transcript_964 other upstream 5855 24932906 ~ 24932978 (-) True trnak-cuu_7
unassigned_transcript_967 other upstream 64974 24992025 ~ 24992095 (-) True trnag-gcc_22
unassigned_transcript_970 other upstream 68111 24995162 ~ 24995232 (-) True trnag-gcc_23
TU58333 other upstream 354835 25281886 ~ 25282286 (-) True G39413
TU58432 other upstream 634923 25561974 ~ 25568686 (-) True LOC122344921