RNA id: unassigned_transcript_964



Basic Information


Item Value
RNA id unassigned_transcript_964
length 73
RNA type tRNA
GC content 0.62
exon number 1
gene id trnak-cuu_7
representative True

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24932906 ~ 24932978 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCCCggctagctcagtcggtagagcatgagACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU58279 lncRNA downstream 7959 24924707 ~ 24924947 (-) True G39366
TU58278 lncRNA downstream 19967 24912646 ~ 24912939 (-) True G39365
TU58270 lncRNA downstream 69715 24861943 ~ 24863191 (-) True G39357
TU58269 lncRNA downstream 86543 24840745 ~ 24846363 (-) True G39356
TU58223 lncRNA downstream 174279 24754204 ~ 24758627 (-) True LOC122345923
TU58288 lncRNA upstream 83583 25016561 ~ 25016841 (-) True G39375
TU58290 lncRNA upstream 86271 25019249 ~ 25019491 (-) True G39377
TU58301 lncRNA upstream 118203 25051181 ~ 25051518 (-) True G39384
TU58318 lncRNA upstream 242330 25175308 ~ 25176349 (-) True G39401
TU58377 lncRNA upstream 364898 25297876 ~ 25299229 (-) True G39456
XM_043240627.1 mRNA downstream 29617 24814609 ~ 24903289 (-) False LOC122346005
XM_043240626.1 mRNA downstream 29617 24814609 ~ 24903289 (-) True LOC122346005
XM_043240635.1 mRNA downstream 150258 24759478 ~ 24782648 (-) False taf6
XM_043240636.1 mRNA downstream 150258 24759478 ~ 24782648 (-) True taf6
XM_043240457.1 mRNA downstream 174238 24754202 ~ 24758668 (-) False LOC122345923
XM_043239176.1 mRNA upstream 298257 25231235 ~ 25263128 (-) False zfpl1
XM_043239175.1 mRNA upstream 298257 25231235 ~ 25263124 (-) True zfpl1
XM_043240265.1 mRNA upstream 370497 25303475 ~ 25446662 (-) False LOC122345796
XM_043240264.1 mRNA upstream 370497 25303475 ~ 25446661 (-) True LOC122345796
XM_043240267.1 mRNA upstream 370497 25303475 ~ 25446660 (-) False LOC122345796
unassigned_transcript_963 other downstream 5855 24926980 ~ 24927051 (-) True trnak-cuu_6
unassigned_transcript_962 other downstream 8686 24924148 ~ 24924220 (-) True trnak-cuu_5
unassigned_transcript_961 other downstream 14830 24918005 ~ 24918076 (-) True trnak-cuu_4
unassigned_transcript_960 other downstream 15013 24917820 ~ 24917893 (-) True trnan-guu_1
XR_006250980.1 other downstream 338790 24588028 ~ 24594116 (-) False anapc2
unassigned_transcript_967 other upstream 59047 24992025 ~ 24992095 (-) True trnag-gcc_22
unassigned_transcript_970 other upstream 62184 24995162 ~ 24995232 (-) True trnag-gcc_23
TU58333 other upstream 348908 25281886 ~ 25282286 (-) True G39413
TU58432 other upstream 628996 25561974 ~ 25568686 (-) True LOC122344921
unassigned_transcript_987 other upstream 944693 25877671 ~ 25877755 (-) True trnal-cag_26