Item | Value |
---|---|
RNA id | TU64100 |
length | 2039 |
lncRNA type | inter_gene |
GC content | 0.43 |
exon number | 3 |
gene id | G43251 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_056704.1 |
NCBI id | CM032073.1 |
chromosome length | 27473687 |
location | 6815260 ~ 6823021 (-) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
species | tiger barb (Puntius tetrazona) |
id | description |
---|---|
ko04721 | Synaptic vesicle cycle |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU63996 | lncRNA | downstream | 292995 | 6041876 ~ 6522265 (-) | False | cacnb4b |
TU63963 | lncRNA | downstream | 331867 | 5995956 ~ 6483393 (-) | True | G43161 |
TU63978 | lncRNA | downstream | 791750 | 6018440 ~ 6023510 (-) | True | G43173 |
TU63979 | lncRNA | downstream | 791750 | 6018440 ~ 6023510 (-) | False | G43173 |
TU63938 | lncRNA | downstream | 853575 | 5958793 ~ 5961685 (-) | True | desmb |
TU64182 | lncRNA | upstream | 285155 | 7108176 ~ 7112750 (-) | False | agap1 |
TU64428 | lncRNA | upstream | 498868 | 7321889 ~ 7322842 (-) | False | nomo |
TU64427 | lncRNA | upstream | 501749 | 7324770 ~ 7329008 (-) | False | nomo |
TU64450 | lncRNA | upstream | 606757 | 7429778 ~ 7430446 (-) | True | G43472 |
TU64459 | lncRNA | upstream | 638170 | 7461191 ~ 7498435 (-) | True | G43478 |
XM_043242989.1 | mRNA | downstream | 252470 | 6531856 ~ 6562790 (-) | False | inpp4ab |
XM_043243000.1 | mRNA | upstream | 31319 | 6854340 ~ 6867062 (-) | True | tgfbrap1 |
XM_043243018.1 | mRNA | upstream | 44923 | 6867944 ~ 6873860 (-) | True | fhl2b |
XM_043243011.1 | mRNA | upstream | 133111 | 6956132 ~ 6971613 (-) | False | st6gal2b |
XM_043243010.1 | mRNA | upstream | 133111 | 6956132 ~ 6971612 (-) | True | st6gal2b |
XM_043243009.1 | mRNA | upstream | 133111 | 6956132 ~ 6971610 (-) | False | st6gal2b |
TU64004 | other | downstream | 514123 | 6273323 ~ 6301137 (-) | True | G43180 |
TU64005 | other | downstream | 514123 | 6273323 ~ 6301137 (-) | False | G43180 |
TU63795 | other | downstream | 1078640 | 5731218 ~ 5736620 (-) | False | mylkb |
XR_006251223.1 | other | downstream | 1115610 | 5691481 ~ 5699650 (-) | True | arl6ip6 |
XR_006251179.1 | other | downstream | 1175335 | 5622686 ~ 5639925 (-) | False | adam23a |
TU64095 | other | upstream | 1219 | 6824240 ~ 6827728 (-) | True | G43248 |
TU64107 | other | upstream | 178094 | 7001115 ~ 7027427 (-) | False | trim63a |
TU64411 | other | upstream | 464269 | 7287290 ~ 7287927 (-) | False | LOC122346787 |
TU64423 | other | upstream | 756874 | 7579895 ~ 7586367 (-) | True | G43463 |
TU64424 | other | upstream | 756874 | 7579895 ~ 7583120 (-) | False | G43463 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
zebrafish (Danio rerio) | TCONS_00065102 | True | 9287 | lncRNA | 0.43 | 2 | NC_007117.7 | 14934250 ~ 14947955 (-) |
grasscarp (Ctenopharyngodon idella) | TU137395 | True | 4671 | lncRNA | 0.45 | 2 | CI01000024 | 917374 ~ 927307 (+) |
rainbow trout (Oncorhynchus mykiss) | TU151493 | True | 758 | lncRNA | 0.37 | 2 | NC_048566.1 | 30747628 ~ 30761914 (+) |
rainbow trout (Oncorhynchus mykiss) | TU1743578 | True | 933 | lncRNA | 0.49 | 3 | NC_048582.1 | 17537512 ~ 17549323 (-) |
mexican tetra (Astyanax mexicanus) | TU151493 | True | 3030 | lncRNA | 0.40 | 3 | NC_035909.1 | 19070606 ~ 19082785 (-) |