RNA id: TU64423


Basic Information

Item Value
RNA id TU64423
length 1262
RNA type TUCP
GC content 0.47
exon number 12
gene id G43463
representative True

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 7579895 ~ 7586367 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCAGCGCTGCACGATGGGTGGAATTAAGGAGCTAACGATTCTTATTCTATCTTTCCTGTACGTGACATTTGTGAATGGTACTGATGATATTTTGGTAGGCTGCGGGGGCTTTGTTAAGTCAGATGTGGAAATTAACTACTCTGTCATTGAGATCAAACTTTACACTAAACAGGGCTCTCTGAAATATCAGACTGACTGTGCACCAATCAATGGTTACTTCATGATCCTCTCTATGACAAGGGTGATTTTGTTATAAAGATAGAACCACCATCAGGATGGAGCTTTGAGCCAACAACTGTGGACCTGCATGTGGATGGAATTACAGACATCTGCACTAAAGAACAAGATATCAACTTTGTTTTTACGGGTTTTCGGTCCTCGGAACTatattaagtaaaggGCATTTGTTGGGACCTGCAGGGGTTGAAGTAAGTTTGAGAAAAGCAGGAGAAGCTGATGTCCTTCAAAGTGTCCTCACACAAGCTGGAGGCCAGTATACTTTCCTCAAGGTGCTTCCGGGAAGTTATGACATCACCGCCACTCACGCCTCATGGACCCTTGAGCAGAGCTCAACTGCTGTGGTTGTGTCAAACGAAAACGCCCCCGCCGCAGCTCCTCTTGTGGTAAAGGGTTACGATGTCTCTGGAGAGGTGCAGAGTGACAGTGAACCCATGAAAGGAGTCGGCTTCCTCCTTTACTCTGCCAGCGTAACACAGGAGgatATCAGTGGCTGCAGTGTGGCCCCTGTGGATGGAGCTGTAGTCGGCGACCCCGcgcttgtgtttttgtgcagttcCCAGTCTCGTGAGGATGGTACTTTCTCATTCCCCTGCCTTCCCAGTGGCGAATATACAGTGGTCCCATATTACAGAGGGGAGAGAATCACATTCGATGTTGCTCCTTCTCGCATGGATTTCAAAGTAGAACACAGCAGTTTAACGTTGGAGCCAATATTTCGTGTCATGGGATTCTCTGTGATGGGCAGAGTTCTGAATAGCCCCAATGGAGAAGGTGTCGCAGATGCTGTAGTAACACTTAACAACCAAATTACAGTGGAAACTAAAGACGATGGTTCGTTCAGATTGGAAAATATGACCACAGGCACTTATACTATTAACACGCACAAGGAGCTGATGTTCTTTGAGCCAGTCACTGTGAAGATTGCTCCCAGCACCCCTCAGCTGCCAGACATCATCACTGCAGGGTTTAGCGTGTGTGGTCACATCTCAGTCACTCGTCTTCCTGAAACCGTTAAACAGCTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64459 lncRNA downstream 81460 7461191 ~ 7498435 (-) True G43478
TU64450 lncRNA downstream 149449 7429778 ~ 7430446 (-) True G43472
TU64427 lncRNA downstream 250887 7324770 ~ 7329008 (-) False nomo
TU64428 lncRNA downstream 257053 7321889 ~ 7322842 (-) False nomo
TU64182 lncRNA downstream 467145 7108176 ~ 7112750 (-) False agap1
TU64487 lncRNA upstream 150723 7737090 ~ 7770424 (-) False LOC122346476
TU64486 lncRNA upstream 179170 7765537 ~ 7770424 (-) True LOC122346476
TU64489 lncRNA upstream 181658 7768025 ~ 7770424 (-) False LOC122346476
TU64512 lncRNA upstream 211757 7798124 ~ 7799697 (-) True G43516
TU64529 lncRNA upstream 270098 7856465 ~ 7857596 (-) True G43528
XM_043241072.1 mRNA downstream 191596 7385719 ~ 7388299 (-) True LOC122346455
XM_043241848.1 mRNA downstream 197090 7356348 ~ 7382805 (-) False col18a1b
XM_043241847.1 mRNA downstream 197090 7356348 ~ 7382805 (-) False col18a1b
XM_043241846.1 mRNA downstream 203158 7356348 ~ 7376737 (-) False col18a1b
XM_043241845.1 mRNA downstream 203158 7356348 ~ 7376737 (-) False col18a1b
XM_043241646.1 mRNA upstream 22106 7608473 ~ 7659200 (-) True tns1a
XM_043242123.1 mRNA upstream 75097 7661464 ~ 7694866 (-) False LOC122347094
XM_043242122.1 mRNA upstream 75118 7661485 ~ 7695119 (-) True LOC122347094
XM_043242121.1 mRNA upstream 75156 7661523 ~ 7695119 (-) False LOC122347094
XM_043241647.1 mRNA upstream 139036 7725403 ~ 7732324 (-) True LOC122346795
TU64411 other downstream 291968 7287290 ~ 7287927 (-) False LOC122346787
TU64107 other downstream 552468 7001115 ~ 7027427 (-) False trim63a
TU64096 other downstream 752167 6819359 ~ 6827728 (-) False G43248
TU64095 other downstream 752167 6824240 ~ 6827728 (-) True G43248
TU64004 other downstream 1278758 6273323 ~ 6301137 (-) True G43180
TU64510 other upstream 460735 8047102 ~ 8048008 (-) True G43514
TU64907 other upstream 1122339 8708706 ~ 8711960 (-) True G43801
TU64905 other upstream 1125654 8712021 ~ 8713858 (-) False G43801
TU65020 other upstream 1674249 9260616 ~ 9261245 (-) True G43890
TU65026 other upstream 1679635 9266002 ~ 9267324 (-) True G43896

Expression Profile