RNA id: TU64777


Basic Information

Item Value
RNA id TU64777
length 1425
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G43709
representative True

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 8449138 ~ 8450686 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCTGACTACATCCATCGAAGCAGCACCAGACTTAAAAAAGTCAGTACTGTCTTCGATCTTCTCTACATTGGTCAAAATACTCTTCCACACCACCTGGACgaaaaaaggaataaatgatCTAACCTTCAGGCTTCAAAACACATCGTTTTTCATCCTCAGAGAGCTCCACAGTGGAACTGACAGCAGCTTTAAAATACTGGGACGCAGCAATCATCTTCCCATCCTCAAACTGCAGATTCTTCACAAGCAACTACACACAAGTACGAACAGACTTTATGtacttaaatacacagacacacgctCGCCTGGAGTCTTGTACTGCATATTTCACTGGgtaaaattctatttaaactCATTCTCATatcattctaaacctgtatgataTTTTCTAGGCAGCGGAAGATAGATAGATGCGCCTTTTTCACTaagaaaatgcttttctgatgtgatttcAAATTTGAAAAGTGAAATAGGTTTACCAAGAaagttttccaaaaatgtttgaaaaagtgAGGGGTAAATAATGACCTATTCTTTTAAGGACCCAAGTACAATTACTGTATGTTGTTGTCCATTACAATATGGTCTGGGATTCTGCTCAGAAATACTTGAGTTGACACAAAAGGAAATGTACAGCtttaatttctatacattttacGGGTTTTTTTACACAAGTAATGCACAGGAGGTTTGTCCAGTTCACATCAAATATGGTACTGATCCTTTAGAGACCCTCATTACGTTTCTAAGATGTGATCTAATTGATTTTTCAGCGGTGCCACATACTGACAGACTGCTGCTTAGCATGCTTGCGCTGAAAATGCTTCTGTCGCTAGGGGCTATAACTTAAGAAAAACCTAATTGTGCTATCTGTGACTGAAGAAGTTGACATTTGACTCCAAAGCAATTGCATCAACAGCCTCTATTCTTTCTAATGTGTCTGTTTCGGTCATGGTGTCTTCACGTGAGCTTGAGCCGTGACGATTGCAGCTTGCacttaaaaggacagttcacccaaaagtcaTTTACTCACACATTTACTCAAAGACATCATCGCTttctctagtttttttttatggcagtttttttgggtgaactatccctttaaatttgGATGACATAGTGACAAATCATATCAATTACGTTAACAATGTTTTGTGCCTGTATCAATTTTAAtagcataaatgaaaaatatttttgcatgtccTTACCGTCTTGCCATCATTCCCAAAAAGAACAAGGCCATTTTTGGTAACCAGACCTGGTCGAGCTGCTCCAGGGATTTCCAGAGGTTGACCATTACTTAAAGAATGATCGTTTTCCAACAGTGTTGATCCATAGAATGAAACATTCTACCgaaaaaattcaaagaaaactgtTGCAAACAAGAGGCGTTTTGCACATAATTTAATGCAGTCTCTGCAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64763 lncRNA downstream 105624 8334362 ~ 8343514 (-) True G43700
TU64760 lncRNA downstream 134515 8314423 ~ 8314623 (-) True G43697
TU64750 lncRNA downstream 154852 8294054 ~ 8294286 (-) True G43691
TU64714 lncRNA downstream 266256 8182679 ~ 8182882 (-) True G43660
TU64509 lncRNA downstream 398460 8049397 ~ 8050678 (-) True G43513
TU64781 lncRNA upstream 101 8450787 ~ 8452319 (-) True G43712
TU64779 lncRNA upstream 3445 8454131 ~ 8454863 (-) True G43710
TU64790 lncRNA upstream 10220 8460906 ~ 8466646 (-) True G43719
TU64808 lncRNA upstream 45078 8495764 ~ 8496633 (-) True G43734
TU64815 lncRNA upstream 95667 8546353 ~ 8546563 (-) True G43739
XM_043241829.1 mRNA downstream 9753 8431444 ~ 8439385 (-) True cfap100
XM_043241920.1 mRNA downstream 31368 8381140 ~ 8417770 (-) True plxnb1b
XM_043241921.1 mRNA downstream 31776 8381140 ~ 8417362 (-) False plxnb1b
XM_043242395.1 mRNA downstream 70097 8374812 ~ 8379041 (-) True si:dkey-19e4.5
XM_043242385.1 mRNA downstream 74463 8346761 ~ 8374675 (-) False setd5
XM_043241652.1 mRNA upstream 16052 8466738 ~ 8479836 (-) True gga1
XM_043241959.1 mRNA upstream 45949 8496635 ~ 8501268 (-) True nprl2
XM_043241334.1 mRNA upstream 56082 8506768 ~ 8524993 (-) True LOC122346602
XM_043242528.1 mRNA upstream 96592 8547278 ~ 8549239 (-) True si:dkey-45d16.4
XM_043242890.1 mRNA upstream 406848 8857534 ~ 8883164 (-) True ube2o
TU64510 other downstream 401130 8047102 ~ 8048008 (-) True G43514
TU64423 other downstream 862771 7579895 ~ 7586367 (-) True G43463
TU64425 other downstream 862771 7579895 ~ 7586367 (-) False G43463
TU64424 other downstream 866018 7579895 ~ 7583120 (-) False G43463
TU64411 other downstream 1161211 7287290 ~ 7287927 (-) False LOC122346787
TU64907 other upstream 258020 8708706 ~ 8711960 (-) True G43801
TU64905 other upstream 261335 8712021 ~ 8713858 (-) False G43801
TU65020 other upstream 809930 9260616 ~ 9261245 (-) True G43890
TU65026 other upstream 815316 9266002 ~ 9267324 (-) True G43896
TU65029 other upstream 818502 9269188 ~ 9270922 (-) True G43899

Expression Profile