RNA id: TU64907



Basic Information


Item Value
RNA id TU64907
length 909
RNA type TUCP
GC content 0.47
exon number 5
gene id G43801
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 8708706 ~ 8713858 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GAAACATGGAGAAGTTCGGCATCCAGCTGCTGAAGACCATCAAACCCATGCTGCATGATCTCAACACGTATCTACACAAAGCCATTCCCGACACCAAGCTCACCATCCGCAAATACCTGGACGCGTCAAGTTTGAGTACTTGtcgTACTGTCTGAAGGTGAAGGAGATGGACGACGAAGAGTACAGCTGTATCgcgtTGGGTGACCCGCTGTACCGCGTCAGCACCGGGAACTACGAGTACCGCTTGATCCTGCGCTGTCGACAGGAAGCCCGCGCGCGCTTCGCCAAGATGCGCAAAGACGTCCTGGAGAAGATCGAACTCCTGGACCAGAAACATGTCCAGGACATTGTGTTCCAGCTGCAGCGCTTACGCTCGGGGATGTCGCACTATTACGGCGACTCGCTACGTGCTGAAAGAGGCTGACGTGTTCCCCATCGAGGTGGATCTGTCCCGGACCATGATCAGCTACGGCGGGCAGAGTCTCctacgaggaggaggaggaggaggacgagaaGACACGGGCCGAGGAGGAGAAGACGGAGCTCCGCAGACTGAGAACGGAGCCGAGAAACTCATCGACGACCAGTGAATTATCAGATGAAATAAGAAATCAATGAAGGATGAGAGAGTATGTTCAGGAAGTAGGATGATcgacaaatacaaataaaagcattatatattacatatttatatatatgatatttaatatagCAAATTCTTTATTGATAAACTACACATTCAAATGACTGGGCAGACAGGAAGTGAATAGCTGGTTGCCGTGTTACATACTTTAGAATAGAATGTTACTTTGGTTACTATGGTAACAGAATTCAAAATTTCAGACAAACATTCTTTATTTGAAGTCTtggcactttttttgtttttcataacaTTTCAAACGAAGGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU64904 lncRNA downstream 732 8706786 ~ 8707974 (-) True G43800
TU64815 lncRNA downstream 162143 8546353 ~ 8546563 (-) True G43739
TU64808 lncRNA downstream 212073 8495764 ~ 8496633 (-) True G43734
TU64790 lncRNA downstream 242060 8460906 ~ 8466646 (-) True G43719
TU64779 lncRNA downstream 253843 8454131 ~ 8454863 (-) True G43710
TU64978 lncRNA upstream 310559 9022519 ~ 9022881 (-) True G43855
TU64979 lncRNA upstream 313248 9025208 ~ 9025429 (-) True G43856
TU65011 lncRNA upstream 538739 9250699 ~ 9251679 (-) True G43881
TU65008 lncRNA upstream 540026 9251986 ~ 9253068 (-) True G43880
TU65014 lncRNA upstream 543766 9255726 ~ 9256009 (-) True G43884
XM_043242528.1 mRNA downstream 159467 8547278 ~ 8549239 (-) True si:dkey-45d16.4
XM_043241334.1 mRNA downstream 183713 8506768 ~ 8524993 (-) True LOC122346602
XM_043241959.1 mRNA downstream 207438 8496635 ~ 8501268 (-) True nprl2
XM_043241652.1 mRNA downstream 228870 8466738 ~ 8479836 (-) True gga1
XM_043241829.1 mRNA downstream 269321 8431444 ~ 8439385 (-) True cfap100
XM_043242890.1 mRNA upstream 145574 8857534 ~ 8883164 (-) True ube2o
XM_043242055.1 mRNA upstream 174548 8886508 ~ 8932433 (-) False LOC122347059
XM_043242054.1 mRNA upstream 174548 8886508 ~ 8932433 (-) True LOC122347059
XM_043242056.1 mRNA upstream 174548 8886508 ~ 8925700 (-) False LOC122347059
XM_043241777.1 mRNA upstream 221123 8933083 ~ 8951173 (-) True acox1
TU64510 other downstream 660698 8047102 ~ 8048008 (-) True G43514
TU64423 other downstream 1122339 7579895 ~ 7586367 (-) True G43463
TU64425 other downstream 1122339 7579895 ~ 7586367 (-) False G43463
TU64424 other downstream 1125586 7579895 ~ 7583120 (-) False G43463
TU64411 other downstream 1420779 7287290 ~ 7287927 (-) False LOC122346787
TU64905 other upstream 61 8712021 ~ 8713858 (-) False G43801
TU65020 other upstream 548656 9260616 ~ 9261245 (-) True G43890
TU65026 other upstream 554042 9266002 ~ 9267324 (-) True G43896
TU65029 other upstream 557228 9269188 ~ 9270922 (-) True G43899
TU65030 other upstream 559458 9271418 ~ 9272305 (-) True G43900

Expression Profile