RNA id: TU65011


Basic Information

Item Value
RNA id TU65011
length 981
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G43881
representative True

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9250699 ~ 9251679 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGaatccacaacatcaaaaaacacctgctgttcatcggttaatgcaacagcagcagcacatttattttctgtccaaattagCCAATTCAATTGCAATATCTCAATACGTGGaaaccatttctgttcaaacaacTCGTCTCTAGCCAGAGACACATGTGCTGAGCAATGTAAGTCTGAGAAtggcataaaatcagaatcaggcGAAACTCTGTCTTTAGCGCCATTGACAAGACTTTCGTGATAATTCATCATCTTGCAATTTCCATTGATAAACATATAGTGGTGTATGTTGGattgcagtcagagtttgaatttggcactgaactgctttcacaccttctggaccagatattagagaaataccCAGTTTGCACAACAAATCTCTCCCCAGCAGATTTTTTGGACAGTGCTGTGAGAGGAGGAAGCTGTGTCTGAAACTTGCACCATTCTCATCTTTACACCTCAGAGGGACTGTATAATTCTCTTTAACAGTATGACCAGATGCAGAAATCGTCCATGCAAAATTTCCACTCAATTTGGGGACAGAGGCAAACTCATTTATCCTTAATACTGAACTCGTGGCCCCCGTATCAgctaaaaacaccctttcaacTCCGTCTATCCATAAGCTAACCTCTGGCATTTGTTGATATGCTAAGTCATTCAAATGAGTATATGTGCCTAATtctctttgtctgaaagatttctcattttctaatttagcaatgcaatcgtgtatgacagcaagcatttcttcattgcaattcgcagcaagcatttcttcattgcaattcgcagtgtcagatgtgggtgtgtgtgtgtcaaacttatCTGTTACTGAAGTGTGGTCGCCGTAGACTTTGCTCTCAACTCCCCCCTCCTCTCTCGCACTCTGCCGTCAATCTGCTTTCGGTTTAGACTTTGCCGCAGCAGCCGCCGTGTGTCTATTCAAAAGCGGGCACTCATTTTTCCAATGTCCgg

Function

GO:

id name namespace
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU64979 lncRNA downstream 225270 9025208 ~ 9025429 (-) True G43856
TU64978 lncRNA downstream 227818 9022519 ~ 9022881 (-) True G43855
TU64892 lncRNA downstream 455959 8599796 ~ 8794740 (-) True G43791
TU64904 lncRNA downstream 542725 8706786 ~ 8707974 (-) True G43800
TU64815 lncRNA downstream 704136 8546353 ~ 8546563 (-) True G43739
TU65008 lncRNA upstream 307 9251986 ~ 9253068 (-) True G43880
TU65014 lncRNA upstream 4047 9255726 ~ 9256009 (-) True G43884
TU65022 lncRNA upstream 10724 9262403 ~ 9262609 (-) True G43892
TU65024 lncRNA upstream 12648 9264327 ~ 9264574 (-) True G43894
TU65036 lncRNA upstream 23961 9275640 ~ 9276072 (-) True G43906
XM_043241779.1 mRNA downstream 255066 8971674 ~ 8995633 (-) True srp68
XM_043241665.1 mRNA downstream 283319 8955256 ~ 8967380 (-) True evpla
XM_043241777.1 mRNA downstream 299526 8933083 ~ 8951173 (-) True acox1
XM_043242589.1 mRNA upstream 31724 9283403 ~ 9299043 (-) False nol11
XM_043242588.1 mRNA upstream 31724 9283403 ~ 9299043 (-) True nol11
XM_043241579.1 mRNA upstream 56907 9308586 ~ 9352668 (-) False si:dkey-237i9.1
XM_043241581.1 mRNA upstream 56907 9308586 ~ 9352668 (-) True si:dkey-237i9.1
XM_043241580.1 mRNA upstream 56907 9308586 ~ 9352665 (-) False si:dkey-237i9.1
TU64905 other downstream 536841 8712021 ~ 8713858 (-) False G43801
TU64907 other downstream 538739 8708706 ~ 8711960 (-) True G43801
TU64510 other downstream 1202691 8047102 ~ 8048008 (-) True G43514
TU64425 other downstream 1664332 7579895 ~ 7586367 (-) False G43463
TU64424 other downstream 1667579 7579895 ~ 7583120 (-) False G43463
TU65020 other upstream 8937 9260616 ~ 9261245 (-) True G43890
TU65026 other upstream 14323 9266002 ~ 9267324 (-) True G43896
TU65029 other upstream 17509 9269188 ~ 9270922 (-) True G43899
TU65030 other upstream 19739 9271418 ~ 9272305 (-) True G43900
TU65247 other upstream 773899 10025578 ~ 10027635 (-) False c6h17orf67

Expression Profile