RNA id: TU65024



Basic Information


Item Value
RNA id TU65024
length 248
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G43894
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9264327 ~ 9264574 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCGATTATCTCTTACAGTTTTAAGCACAGTAATGCAACATAAACACttccacttatttttaataaaacaatgtatCAACAATAATGCTTCATATGacttaaaatattcacattaacAACCGGATTTAATGTATTGACATACACAAGCAgggaattatattatatacatataattatatatatacaacaatcGTATTATATTCGATTCGTTTCAATTGTTGAACCTTTCACTCACACAAAAATTTACTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65022 lncRNA downstream 1718 9262403 ~ 9262609 (-) True G43892
TU65014 lncRNA downstream 8318 9255726 ~ 9256009 (-) True G43884
TU65008 lncRNA downstream 11259 9251986 ~ 9253068 (-) True G43880
TU65011 lncRNA downstream 12648 9250699 ~ 9251679 (-) True G43881
TU64979 lncRNA downstream 238898 9025208 ~ 9025429 (-) True G43856
TU65036 lncRNA upstream 11066 9275640 ~ 9276072 (-) True G43906
TU65048 lncRNA upstream 16357 9280931 ~ 9281402 (-) True G43915
TU65049 lncRNA upstream 16941 9281515 ~ 9282468 (-) True G43916
TU65157 lncRNA upstream 120535 9385109 ~ 9729660 (-) True G43991
TU65182 lncRNA upstream 315122 9579696 ~ 9915583 (-) True G44010
XM_043241779.1 mRNA downstream 268694 8971674 ~ 8995633 (-) True srp68
XM_043241665.1 mRNA downstream 296947 8955256 ~ 8967380 (-) True evpla
XM_043241777.1 mRNA downstream 313154 8933083 ~ 8951173 (-) True acox1
XM_043242589.1 mRNA upstream 18829 9283403 ~ 9299043 (-) False nol11
XM_043242588.1 mRNA upstream 18829 9283403 ~ 9299043 (-) True nol11
XM_043241579.1 mRNA upstream 44012 9308586 ~ 9352668 (-) False si:dkey-237i9.1
XM_043241581.1 mRNA upstream 44012 9308586 ~ 9352668 (-) True si:dkey-237i9.1
XM_043241580.1 mRNA upstream 44012 9308586 ~ 9352665 (-) False si:dkey-237i9.1
TU65020 other downstream 3082 9260616 ~ 9261245 (-) True G43890
TU64905 other downstream 550469 8712021 ~ 8713858 (-) False G43801
TU64907 other downstream 552367 8708706 ~ 8711960 (-) True G43801
TU64510 other downstream 1216319 8047102 ~ 8048008 (-) True G43514
TU64425 other downstream 1677960 7579895 ~ 7586367 (-) False G43463
TU65026 other upstream 1428 9266002 ~ 9267324 (-) True G43896
TU65029 other upstream 4614 9269188 ~ 9270922 (-) True G43899
TU65030 other upstream 6844 9271418 ~ 9272305 (-) True G43900
TU65247 other upstream 761004 10025578 ~ 10027635 (-) False c6h17orf67
TU65385 other upstream 877037 10141611 ~ 10145147 (-) False cd7al

Expression Profile