RNA id: TU65220



Basic Information


Item Value
RNA id TU65220
length 586
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G44040
representative False

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 9942615 ~ 9943218 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tagaaaaacattaaatccaTACATGTATAAAATTAAGACTTTCTGtacaatttcatgttttatatgtaaatgcataatacaaaaaaaaaaaaaaatcacatacaaGGCTACAGTGAGCTATTTATCAAACATTACTATAGTGCAATGATCTGCTActtaaaaaatcatgttttaaaatagaaagtgtTTAGAAAATAGAAAGCTGTAACAAACTGACAGAAAAGCTGTAGTGACTGTCATTAACACTGCATCATCTGCACTGGAACAGTTTCTTCTTGTGGAGGCAAGTGCAGCTCACATCCAAATCGTCGTCATTGGTCCAAATGCACAGGACCGCTCTATTATAACCAGACACTCTGTCCACATGCCTCAGCTACCGGCTCCACTGCATACACAGTGGATGTTCCACTCTTACCGGTTTCATCCTTTTAACTGCCATACCATAAGAGAGCAATCAGAACTTTAACACCAGGCAGGTTCAGGCACCACCAACCCCAAAGAGTTTGAGTAAGGTTTTGCAGTCTGGGTCAATAAGGTCAGCAGGCTTCTCCCCACAGTCGTTTTCAGCCTCAGTGTCTGCACCCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65215 lncRNA downstream 609 9941570 ~ 9942006 (-) True G44037
TU65210 lncRNA downstream 2001 9939424 ~ 9940614 (-) True G44036
TU65216 lncRNA downstream 7138 9933701 ~ 9935477 (-) True G44038
TU65213 lncRNA downstream 10091 9930786 ~ 9932524 (-) False G44036
TU65187 lncRNA downstream 14210 9927231 ~ 9928405 (-) True G44015
TU65221 lncRNA upstream 2467 9945667 ~ 9948985 (-) True anapc11
TU65222 lncRNA upstream 2467 9945667 ~ 9948985 (-) False anapc11
TU65223 lncRNA upstream 2467 9945667 ~ 9948985 (-) False anapc11
TU65251 lncRNA upstream 70736 10013936 ~ 10018068 (-) True G44065
TU65294 lncRNA upstream 140790 10083990 ~ 10084275 (-) True G44095
XM_043241799.1 mRNA downstream 160632 9778250 ~ 9781983 (-) True LOC122346913
XM_043241673.1 mRNA downstream 232017 9586425 ~ 9710598 (-) True LOC122346819
XM_043241579.1 mRNA downstream 589947 9308586 ~ 9352668 (-) False si:dkey-237i9.1
XM_043242274.1 mRNA upstream 4602 9947802 ~ 9948988 (-) False anapc11
XM_043242275.1 mRNA upstream 4602 9947802 ~ 9948978 (-) False anapc11
XM_043242276.1 mRNA upstream 4843 9948043 ~ 9948978 (-) False anapc11
XM_043242033.1 mRNA upstream 82253 10025453 ~ 10027680 (-) True c6h17orf67
XM_043242429.1 mRNA upstream 96227 10039427 ~ 10048868 (-) False trim25
TU65030 other downstream 670310 9271418 ~ 9272305 (-) True G43900
TU65029 other downstream 671693 9269188 ~ 9270922 (-) True G43899
TU65026 other downstream 675291 9266002 ~ 9267324 (-) True G43896
TU65020 other downstream 681370 9260616 ~ 9261245 (-) True G43890
TU64905 other downstream 1228757 8712021 ~ 8713858 (-) False G43801
TU65247 other upstream 82378 10025578 ~ 10027635 (-) False c6h17orf67
TU65385 other upstream 198411 10141611 ~ 10145147 (-) False cd7al
TU65678 other upstream 766845 10710045 ~ 10716741 (-) True G44358
XR_006251151.1 other upstream 1111835 11055035 ~ 11069458 (-) False brdt
XR_006251152.1 other upstream 1111835 11055035 ~ 11069457 (-) False brdt

Expression Profile