RNA id: TU65311



Basic Information


Item Value
RNA id TU65311
length 200
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G44105
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 10097980 ~ 10098179 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GAgctcttaaaatattttgaatacgtttttatgttctttttttcttcgtACTAGGCCCGTAACGTTTACGTTTGCTATTATAACGTTTACATTTGTGGAAAAAGAGGAATAATACCGGAGTTTACGACCGATCTACATCCATGTGTCACCACAGGGGGCCGCTCCACACCTGCAATGAGACCCTTCAGAACGTGAATCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU65294 lncRNA downstream 13705 10083990 ~ 10084275 (-) True G44095
TU65251 lncRNA downstream 79912 10013936 ~ 10018068 (-) True G44065
TU65221 lncRNA downstream 148995 9945667 ~ 9948985 (-) True anapc11
TU65222 lncRNA downstream 148995 9945667 ~ 9948985 (-) False anapc11
TU65223 lncRNA downstream 148995 9945667 ~ 9948985 (-) False anapc11
TU65386 lncRNA upstream 40726 10138905 ~ 10145147 (-) True cd7al
TU65412 lncRNA upstream 140240 10238419 ~ 10238618 (-) True G44167
TU65413 lncRNA upstream 144031 10242210 ~ 10242509 (-) True G44168
TU65408 lncRNA upstream 144525 10242704 ~ 10243401 (-) False tnrc6c2
TU65477 lncRNA upstream 257835 10356014 ~ 10356314 (-) False LOC122347367
XM_043242429.1 mRNA downstream 49112 10039427 ~ 10048868 (-) False trim25
XM_043242426.1 mRNA downstream 49119 10039427 ~ 10048861 (-) True trim25
XM_043242427.1 mRNA downstream 49123 10039427 ~ 10048857 (-) False trim25
XM_043242428.1 mRNA downstream 49124 10039427 ~ 10048856 (-) False trim25
XM_043242033.1 mRNA downstream 70300 10025453 ~ 10027680 (-) True c6h17orf67
XM_043241684.1 mRNA upstream 3304 10101483 ~ 10106808 (-) True utp6
XM_043240990.1 mRNA upstream 25636 10123815 ~ 10126741 (-) True tefm
XM_043240992.1 mRNA upstream 43568 10141747 ~ 10145168 (-) False cd7al
XM_043240987.1 mRNA upstream 48045 10146224 ~ 10152064 (-) False znf207b
XM_043240986.1 mRNA upstream 48045 10146224 ~ 10152064 (-) True znf207b
TU65247 other downstream 70345 10025578 ~ 10027635 (-) False c6h17orf67
TU65030 other downstream 825675 9271418 ~ 9272305 (-) True G43900
TU65029 other downstream 827058 9269188 ~ 9270922 (-) True G43899
TU65026 other downstream 830656 9266002 ~ 9267324 (-) True G43896
TU65020 other downstream 836735 9260616 ~ 9261245 (-) True G43890
TU65385 other upstream 43432 10141611 ~ 10145147 (-) False cd7al
TU65678 other upstream 611866 10710045 ~ 10716741 (-) True G44358
XR_006251151.1 other upstream 956856 11055035 ~ 11069458 (-) False brdt
XR_006251152.1 other upstream 956856 11055035 ~ 11069457 (-) False brdt
unassigned_transcript_1087 other upstream 1874301 11972480 ~ 11972551 (-) True trnag-ucc_1