RNA id: TU66694


Basic Information

Item Value
RNA id TU66694
length 355
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G45070
representative True

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 13860255 ~ 13860609 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TATCAAATCGATTACGTTTGCAACTTTCTGACATGACTCACGTATCTTCTCAGCAAGACATTCAGAGTGCGTCTGTTTCTTGGGGATTTGAGAGTCCAGACGTCTCTAGACCAGCAGGATCCACGTCGAACTGAACTGCTTCCGTTCAGGTGTTGCTCTCAATCTTTGTTGCCTTCCTATGACTCCGTTCATGCAGTGCATCTTCTCAAGGCCAAGCTTAAGCGTCCCGGGAATTCATAACATTGGCATGGTTCAGATTTGTACGGGTTAGTCGTCTCTCTGTTGATGTCTCTGTTTTAGCGATCCATTGGAAGAAAAgcagtgagagtgagtgtgccTGCTCGGGGTCTTTCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU66675 lncRNA upstream 23436 13836607 ~ 13836819 (+) True G45056
TU66600 lncRNA upstream 198158 13661812 ~ 13662097 (+) True G44998
XR_006251162.1 lncRNA upstream 202489 13656192 ~ 13657766 (+) True LOC122346715
TU66598 lncRNA upstream 209372 13650115 ~ 13650883 (+) True G44997
TU66580 lncRNA upstream 265654 13589986 ~ 13594601 (+) False LOC122346508
TU66717 lncRNA downstream 132136 13992745 ~ 13996966 (+) True G45075
TU66727 lncRNA downstream 155826 14016435 ~ 14128344 (+) True G45084
XR_006251242.1 lncRNA downstream 268738 14129347 ~ 14131078 (+) True LOC122347615
TU66741 lncRNA downstream 269879 14130488 ~ 14130998 (+) False LOC122347615
TU66775 lncRNA downstream 353602 14214211 ~ 14215282 (+) True G45112
XM_043242643.1 mRNA upstream 2355 13854242 ~ 13857900 (+) True ptmaa
XM_043242542.1 mRNA upstream 36463 13820119 ~ 13823792 (+) True phb2b
XM_043242544.1 mRNA upstream 40336 13813916 ~ 13819919 (+) True pde6d
XM_043241819.1 mRNA upstream 137821 13697792 ~ 13722434 (+) False usp13
XM_043242793.1 mRNA downstream 7268 13867877 ~ 13971903 (+) True dlg1a
XM_043242794.1 mRNA downstream 7268 13867877 ~ 13971903 (+) False dlg1a
XM_043242804.1 mRNA downstream 7268 13867877 ~ 13971903 (+) False dlg1a
XM_043242797.1 mRNA downstream 7268 13867877 ~ 13971903 (+) False dlg1a
XM_043242795.1 mRNA downstream 7268 13867877 ~ 13971903 (+) False dlg1a
TU66465 other upstream 450343 13394229 ~ 13409912 (+) True G44887
TU66125 other upstream 750889 13108735 ~ 13109366 (+) True G44645
TU66063 other upstream 778136 13080610 ~ 13082119 (+) False smx5
TU66085 other upstream 1079335 12766183 ~ 12780920 (+) False crocc2
TU65993 other upstream 1767800 12087399 ~ 12092455 (+) False G44588
XR_006251224.1 other downstream 111564 13972173 ~ 13979005 (+) False meltf
unassigned_transcript_1264 other downstream 220324 14080933 ~ 14081004 (+) True trnag-ucc_2
TU67192 other downstream 1375602 15236211 ~ 15238200 (+) False pomgnt1
TU67233 other downstream 1498252 15358861 ~ 15459386 (+) True G45419
TU67277 other downstream 1704372 15564981 ~ 15566668 (+) True G45448

Expression Profile