RNA id: TU67483



Basic Information


Item Value
RNA id TU67483
length 742
lncRNA type sense_over
GC content 0.46
exon number 2
gene id insl5a
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 15489118 ~ 15490685 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGCAAGAACGTGGTTGGCAGAAGATCCAGAGGACCTTAGAGAGACTAAAGGAAAGCGTAAGGGCGGACGAGGAAGCCACTATGAGAGGTTTTCACTGCCCTGCTCTGCTGCTGTCGGTTCTGCTGCTGTGGGCTGTGTGTAGCGTGTCAGAAGTGCAGGCTGACGTGAAGATGGTCAAGCTGTGCGGCCGGGAGCTCATCCGAGCCGTCGTCTACACGCAAGGCGCGGATCCAGGTGGAGGAGGTTCAGAAGTCCGCAGGATATGGAAGGGTTTTTTAATGGAGATCTAAGCAGCGCTGAGGATCTTAGCGAGAGTCCTGGATCTGATCTGGCCAGGCGAGACCTGCATCATGATTGCTGTCAGTTTGGCTGCAAGAAAAGTGACCTCACGATGCTCTGCTGAGAAACGAACCTGTGTTTTTCTATTTGTCTCACCATGTTTTCTTCCACATCGAGTCCAAATGAATACGAACACTTCTCAAGTGTACTCTAAATGTACAGTcagttgtaatttatttaacagcTTAATTTGCCAGTAGATGAtgctaatttacataaaaagcatgTCTAATTTGGGATTAGATGATTCTGCTACACTTGTACTCTAAATGCACCACGAAAGAGGTTAAATATCAAGTCACCGACAGCAGTGAAACTGCATAATGTGGTGCTCAGCAGTGATCGTGCTTTgaaagtgtttaattttaagTTGTATTTTGCAAACTTTGTCAATAAACATTAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67453 lncRNA downstream 17 15486663 ~ 15489101 (-) True G45554
TU67480 lncRNA downstream 4151 15482906 ~ 15484967 (-) True G45579
TU67460 lncRNA downstream 169084 15319385 ~ 15320034 (-) True G45560
TU67412 lncRNA downstream 249478 15185152 ~ 15239640 (-) False G45543
TU67490 lncRNA upstream 44701 15535386 ~ 15657179 (-) False LOC122346545
XR_006251193.1 lncRNA upstream 89899 15580584 ~ 15581055 (-) True LOC122347074
XR_006251215.1 lncRNA upstream 96821 15587506 ~ 15588222 (-) True LOC122347378
XR_006251219.1 lncRNA upstream 100382 15591067 ~ 15592196 (-) True LOC122347411
TU67511 lncRNA upstream 153384 15644069 ~ 15645396 (-) True G45602
XM_043242571.1 mRNA downstream 94995 15344929 ~ 15394123 (-) True sgip1a
XM_043241046.1 mRNA downstream 155185 15331236 ~ 15333933 (-) True LOC122346434
XM_043242964.1 mRNA downstream 158267 15327583 ~ 15330851 (-) True LOC122347580
XM_043241714.1 mRNA downstream 232958 15246429 ~ 15256160 (-) True LOC122346855
XM_043243037.1 mRNA downstream 277611 15187162 ~ 15211507 (-) False adcyap1r1b
XM_043241018.1 mRNA upstream 103678 15594363 ~ 15600846 (-) True LOC122346414
XM_043241327.1 mRNA upstream 110747 15601432 ~ 15603448 (-) True LOC122346598
XM_043241258.1 mRNA upstream 166051 15656736 ~ 15685485 (-) True LOC122346545
XM_043242474.1 mRNA upstream 200577 15691262 ~ 15695534 (-) True LOC122347277
XM_043242475.1 mRNA upstream 265624 15756309 ~ 15765107 (-) True LOC122347279
TU67455 other downstream 158301 15328967 ~ 15330817 (-) False LOC122347580
TU66983 other downstream 1295952 14160475 ~ 14193166 (-) True G45257
TU66636 other downstream 1807844 13668528 ~ 13681274 (-) False tmem131
unassigned_transcript_1263 other downstream 2021179 13467868 ~ 13467939 (-) True trnaa-cgc_55
unassigned_transcript_1262 other downstream 2021553 13467494 ~ 13467565 (-) True trnaa-ugc_115
TU67521 other upstream 113225 15603910 ~ 15605470 (-) True G45606
TU67688 other upstream 568283 16058968 ~ 16059767 (-) True G45730
TU67689 other upstream 569208 16059893 ~ 16060466 (-) True G45731
TU67772 other upstream 870515 16361200 ~ 16364020 (-) False fam183a
TU67937 other upstream 1325955 16816640 ~ 16830208 (-) True rgs8

Expression Profile