RNA id: TU67746



Basic Information


Item Value
RNA id TU67746
length 221
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G45770
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 16320413 ~ 16322805 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTTTCGCTGTTGACCGTACATGGGCCCACGGTCTGGAGTGTGTAGCATGATCCTGAGACCCAAAAACACAGGagcacacacactgtgtgtgtagCAGACCCCATGCTTTCCTGCTTCCTGCTCAGATTTGGCTCTTCTGATTATTTAGAGTATgtcaaaatgtatgttttgttctCCTCAGACGTCACATTTTAACATGGgcatgttcatttttgttagCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU67717 lncRNA downstream 49305 16270902 ~ 16271108 (-) True G45753
TU67716 lncRNA downstream 51021 16268915 ~ 16269392 (-) True G45752
TU67715 lncRNA downstream 52871 16267183 ~ 16267542 (-) True G45751
TU67663 lncRNA downstream 201827 15941258 ~ 16118586 (-) False G45709
TU67946 lncRNA upstream 864651 17187456 ~ 17187794 (-) True G45897
TU67960 lncRNA upstream 920875 17243680 ~ 17246369 (-) False LOC122347244
TU67974 lncRNA upstream 1090233 17413038 ~ 17414139 (-) False brinp3a.2
TU67995 lncRNA upstream 1191833 17514638 ~ 17518605 (-) True G45930
TU68086 lncRNA upstream 1484816 17807621 ~ 17808115 (-) True G45993
XM_043242792.1 mRNA downstream 8760 16299579 ~ 16311653 (-) True tie1
XM_043242785.1 mRNA downstream 21488 16292195 ~ 16298925 (-) False mpl
XM_043242786.1 mRNA downstream 21544 16292195 ~ 16298869 (-) False mpl
XM_043242784.1 mRNA downstream 21544 16292195 ~ 16298869 (-) True mpl
XM_043242791.1 mRNA downstream 36267 16281389 ~ 16284146 (-) True prpf38a
XM_043242684.1 mRNA upstream 17500 16340305 ~ 16350269 (-) False LOC122347428
XM_043242685.1 mRNA upstream 17500 16340305 ~ 16350028 (-) False LOC122347428
XM_043242683.1 mRNA upstream 17500 16340305 ~ 16350025 (-) True LOC122347428
XM_043242527.1 mRNA upstream 38362 16361167 ~ 16364019 (-) True fam183a
XM_043242526.1 mRNA upstream 38363 16361168 ~ 16364019 (-) False fam183a
TU67689 other downstream 259947 16059893 ~ 16060466 (-) True G45731
TU67688 other downstream 260646 16058968 ~ 16059767 (-) True G45730
TU67521 other downstream 714943 15603910 ~ 15605470 (-) True G45606
TU67455 other downstream 989596 15328967 ~ 15330817 (-) False LOC122347580
TU66983 other downstream 2127247 14160475 ~ 14193166 (-) True G45257
TU67772 other upstream 38395 16361200 ~ 16364020 (-) False fam183a
TU67937 other upstream 493835 16816640 ~ 16830208 (-) True rgs8
TU67944 other upstream 863884 17186689 ~ 17187318 (-) True G45895
TU67962 other upstream 985010 17307815 ~ 17308478 (-) True G45910
XR_006251188.1 other upstream 1420910 17743715 ~ 17774107 (-) False opa1

Expression Profile