RNA id: TU68093



Basic Information


Item Value
RNA id TU68093
length 200
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G46000
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 17822536 ~ 17822735 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATTGTGAGATACGCGTCGAGTTAGCTGTCGAGTAGCAGCATGTTATTGTATCATCGCTTAGTAGTTTGCGTCGGTCCATAATTGTCATTTAAACTTTGACTCCTTTTATTGCGCTGAACCTTAATGAACTGTgatgttaccatggcaacaacACTTGGCAAGTTTAAGGATCACCCGGCTTCCCCTTGCAGGAACAAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU68086 lncRNA downstream 14421 17807621 ~ 17808115 (-) True G45993
TU67995 lncRNA downstream 303931 17514638 ~ 17518605 (-) True G45930
TU67974 lncRNA downstream 408397 17413038 ~ 17414139 (-) False brinp3a.2
TU67960 lncRNA downstream 576167 17243680 ~ 17246369 (-) False LOC122347244
TU67946 lncRNA downstream 634742 17187456 ~ 17187794 (-) True G45897
XR_006251164.1 lncRNA upstream 217629 18040364 ~ 18044630 (-) False LOC122346731
XR_006251163.1 lncRNA upstream 219912 18042647 ~ 18044630 (-) True LOC122346731
XR_006251165.1 lncRNA upstream 240046 18062781 ~ 18066949 (-) True LOC122346732
TU68243 lncRNA upstream 274333 18097068 ~ 18097490 (-) True G46074
TU68269 lncRNA upstream 294621 18117356 ~ 18117582 (-) True G46092
XM_043241930.1 mRNA downstream 48430 17743715 ~ 17774106 (-) False opa1
XM_043242965.1 mRNA upstream 171235 17993970 ~ 17996739 (-) True LOC122347583
XM_043241575.1 mRNA upstream 192503 18015238 ~ 18024042 (-) True LOC122346727
XM_043241577.1 mRNA upstream 205319 18028054 ~ 18040353 (-) True LOC122346729
XM_043241576.1 mRNA upstream 222918 18045653 ~ 18060885 (-) True LOC122346728
XM_043241953.1 mRNA upstream 256899 18079634 ~ 18083673 (-) True nit2
XR_006251188.1 other downstream 48429 17743715 ~ 17774107 (-) False opa1
XR_006251187.1 other downstream 48429 17743715 ~ 17774107 (-) True opa1
TU67962 other downstream 514058 17307815 ~ 17308478 (-) True G45910
TU67944 other downstream 635218 17186689 ~ 17187318 (-) True G45895
TU67937 other downstream 992328 16816640 ~ 16830208 (-) True rgs8
TU68751 other upstream 821571 18644306 ~ 18645134 (-) True G46420
TU68756 other upstream 891439 18714174 ~ 18717488 (-) True G46423
TU68851 other upstream 1232411 19055146 ~ 19056131 (-) True G46478
XR_006251201.1 other upstream 1292326 19115061 ~ 19149730 (-) False vdrb
TU68985 other upstream 1730584 19553319 ~ 19555931 (-) False tsfm

Expression Profile