RNA id: TU68751



Basic Information


Item Value
RNA id TU68751
length 331
RNA type TUCP
GC content 0.47
exon number 2
gene id G46420
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 18644306 ~ 18645134 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGGAGCTCCGCAAAGAAGAAAAGAGTTTACGATGAGATAAGCCAGGAAATGCTGAACGGGGGCTTCAGTCGCTCGACCGAGCAAATCGAAAATAAGTTAAAGAAGCTCAGAAAGGAGTACAGGGACCTGAAAAGGAAACCGAGTGAGAGTGATAGTGGGCAGATTAGTAAAACATTCGACCACGAAGTTATGGAGTCTGTGCTGGAGCATGGACCAAGCAGTCATCTGACTGGGGCCTTTAATTCAGCGACAGACACTCTTGAGAAAAACGCGGACTTCGTTGCGTTTTCTGTAACCGAGCTAGgtAGCAAAATATCTGAGCCCAAAACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251132.1 lncRNA downstream 953 18642722 ~ 18643353 (-) True LOC122346470
TU68387 lncRNA downstream 284325 18359679 ~ 18359981 (-) True G46172
TU68375 lncRNA downstream 311040 18332843 ~ 18333266 (-) True G46160
TU68349 lncRNA downstream 393671 18249934 ~ 18250635 (-) True G46140
TU68269 lncRNA downstream 526724 18117356 ~ 18117582 (-) True G46092
TU68753 lncRNA upstream 11708 18656842 ~ 18721168 (-) True G46421
TU68764 lncRNA upstream 61913 18707047 ~ 18707570 (-) False LOC122347235
TU68768 lncRNA upstream 116450 18761584 ~ 18762435 (-) True G46432
TU68775 lncRNA upstream 212578 18857712 ~ 18858471 (-) True G46439
TU68781 lncRNA upstream 237718 18882852 ~ 18886400 (-) True G46444
XM_043242319.1 mRNA downstream 155432 18458127 ~ 18488874 (-) False gabra5
XM_043242320.1 mRNA downstream 160119 18458127 ~ 18484187 (-) True gabra5
XM_043242318.1 mRNA downstream 160130 18458127 ~ 18484176 (-) False gabra5
XM_043240994.1 mRNA downstream 188519 18363838 ~ 18455787 (-) False LOC122346396
XM_043240993.1 mRNA downstream 188519 18363838 ~ 18455787 (-) True LOC122346396
XM_043241259.1 mRNA upstream 57720 18702854 ~ 18705732 (-) True LOC122346546
XM_043242401.1 mRNA upstream 61489 18706623 ~ 18707596 (-) True LOC122347235
XM_043241381.1 mRNA upstream 97931 18743065 ~ 18744116 (-) True LOC122346645
XM_043242960.1 mRNA upstream 118111 18763245 ~ 18765483 (-) True LOC122347578
XM_043241306.1 mRNA upstream 340916 18986050 ~ 18988440 (-) True LOC122346582
XR_006251188.1 other downstream 870199 17743715 ~ 17774107 (-) False opa1
XR_006251187.1 other downstream 870199 17743715 ~ 17774107 (-) True opa1
TU67962 other downstream 1335828 17307815 ~ 17308478 (-) True G45910
TU67944 other downstream 1456988 17186689 ~ 17187318 (-) True G45895
TU67937 other downstream 1814098 16816640 ~ 16830208 (-) True rgs8
TU68756 other upstream 69040 18714174 ~ 18717488 (-) True G46423
TU68851 other upstream 410012 19055146 ~ 19056131 (-) True G46478
XR_006251201.1 other upstream 469927 19115061 ~ 19149730 (-) False vdrb
TU68985 other upstream 908185 19553319 ~ 19555931 (-) False tsfm
TU68987 other upstream 908185 19553319 ~ 19555931 (-) False tsfm

Expression Profile