RNA id: TU69249



Basic Information


Item Value
RNA id TU69249
length 299
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G46750
representative True

Chromosome Information


Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 20016565 ~ 20016863 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


atttaatgctttattagaaacgaaatacatatttacaaacattgcctttaaatacataaataactgaaatattgttttctctAAAAATATATCATCATCTGAAATTGCTTCTGGAATGAGGTTGCCATCATATAATGGTTGCACAATATAAACTTTTATACTTATATTCCATACTCAGTGGGTGTTTTTGTATTAACATCGGACAGTAGCAGCTGGCTCTGGATGGTGTTAACTCTGGCAGCATAGCGAACCATGATgggtttctgtttgtttaatcTTGAAGACAGAGAAGACATGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69226 lncRNA upstream 7982 20008095 ~ 20008583 (+) True G46735
TU69224 lncRNA upstream 8588 20007703 ~ 20007977 (+) True G46733
TU69222 lncRNA upstream 9222 20006285 ~ 20007343 (+) True G46731
TU69221 lncRNA upstream 9755 20006164 ~ 20006810 (+) False G46731
TU69212 lncRNA upstream 16867 19991671 ~ 19999698 (+) True G46726
TU69250 lncRNA downstream 1452 20018315 ~ 20018679 (+) True G46751
TU69251 lncRNA downstream 1966 20018829 ~ 20019302 (+) True G46752
TU69252 lncRNA downstream 4321 20021184 ~ 20021709 (+) True G46753
TU69253 lncRNA downstream 5420 20022283 ~ 20022561 (+) True G46754
TU69254 lncRNA downstream 8726 20025589 ~ 20025868 (+) True G46755
XM_043241478.1 mRNA upstream 10605 20004804 ~ 20005960 (+) True c6h1orf74
XM_043241476.1 mRNA upstream 17437 19995035 ~ 19999128 (+) True ruvbl1
XM_043241365.1 mRNA upstream 33822 19977071 ~ 19982743 (+) True gata2b
XM_043242636.1 mRNA upstream 44132 19966623 ~ 19972433 (+) True si:ch211-157b11.8
XM_043242314.1 mRNA upstream 88221 19922524 ~ 19928344 (+) True slc26a6l
XM_043242927.1 mRNA downstream 10064 20026927 ~ 20038497 (+) False eif4enif1
XM_043242928.1 mRNA downstream 10129 20026992 ~ 20038497 (+) True eif4enif1
XM_043242929.1 mRNA downstream 10130 20026993 ~ 20038497 (+) False eif4enif1
XM_043242930.1 mRNA downstream 22331 20039194 ~ 20050026 (+) True patz1
XM_043242932.1 mRNA downstream 22339 20039202 ~ 20050026 (+) False patz1
TU69089 other upstream 230268 19784177 ~ 19786297 (+) True ghrl
TU69007 other upstream 434741 19580489 ~ 19581824 (+) False itpr1a
TU69008 other upstream 434741 19581196 ~ 19581824 (+) False itpr1a
unassigned_transcript_1265 other upstream 864392 19152102 ~ 19152173 (+) True trnaq-uug_14
TU68431 other upstream 1428118 18577278 ~ 18588447 (+) False atp10a
TU69241 other downstream 70228 20087091 ~ 20095641 (+) True G46742
TU69535 other downstream 615133 20631996 ~ 20637951 (+) False LOC122346811
TU69537 other downstream 708864 20725727 ~ 20749398 (+) False LOC122347404
TU69951 other downstream 1758545 21775408 ~ 21777713 (+) True G47187
TU69952 other downstream 1759071 21775934 ~ 21777713 (+) False G47187

Expression Profile